Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq3 215 4e-51
>seq3
Length=1564943
Score = 215 bits (238), Expect = 4e-51
Identities = 572/854 (67%), Gaps = 21/854 (2%)
Strand=Plus/Minus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
|||||| |||||||| || || |||| ||||||||||||||| ||||| || | ||
Sbjct 416220 ACACCAGCCTTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAG 416161
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTCACACTTTAG 4366
||||| ||||||||||| || || || ||||| ||||||| | ||| || || | |
Sbjct 416160 GAAATGTTTTCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAA- 416102
Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426
||| || || | || ||| || |||||||| | || ||| |||| | || ||| ||
Sbjct 416101 AGCAACCAGTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCAT 416042
Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAA-CTCTTGTTCTATAGTTACGGCTT 4485
|| | || || ||||| |||| | || | ||||| ||| || || ||||
Sbjct 416041 ACCCAATAGAGAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTT 415983
Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATT-TACTAAGTATCCAAACA 4542
||||||| || ||||| |||||| ||| || || || | | || || || |
Sbjct 415982 CTGTGATGAT-TCTTTCGACA-ATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAAT-A 415926
Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602
||||| ||||| || ||||||||||| ||||||| ||||| |||||| || || |
Sbjct 415925 GCAAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGG 415866
Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662
| || || ||||| ||||| |||| || | ||| || || || || || || ||||| |
Sbjct 415865 TCAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGA 415806
Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT 4722
| || | ||||| ||||| || ||||| || |||| || | || ||||| ||
Sbjct 415805 AAAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTA-TAG--GGCTTCGT 415749
Query 4723 CTT---TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATA 4779
| | ||||||| | | ||||| | ||| |||| || | ||||| || | |
Sbjct 415748 CATCACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAA 415689
Query 4780 TAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839
| || || || || | ||| || || | || |||||||| || | |
Sbjct 415688 TGGCATTCAACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACG 415629
Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899
||| |||| || || || ||||| || ||| || || ||||| || || | ||||
Sbjct 415628 AATAAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTT 415569
Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959
||| | ||| || || | | || |||| || ||||||||||| || ||||| ||
Sbjct 415568 CTGGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGG 415509
Query 4960 TGGCTGCAAAAAACGCCA--AAACATGAGAT-ATAAAGTACT-GTTCGTCAGGCTTAAGT 5015
|| ||||| ||||| | | | ||||| | ||| || |||| || | |
Sbjct 415508 AAGCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTC-TCGTTCATTCTG 415450
Query 5016 TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCT 5075
|| ||||||| | | ||| || | ||||| | ||||||| |||||||||| || ||
Sbjct 415449 TTGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCC 415390
Query 5076 TCCGCTTTTTTGTA 5089
|| ||| | || ||
Sbjct 415389 TCGGCTCTCTTATA 415376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049553157997
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |