Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3 215 4e-51 >seq3 Length=1564943 Score = 215 bits (238), Expect = 4e-51 Identities = 572/854 (67%), Gaps = 21/854 (2%) Strand=Plus/Minus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| |||||||| || || |||| ||||||||||||||| ||||| || | || Sbjct 416220 ACACCAGCCTTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAG 416161 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTCACACTTTAG 4366 ||||| ||||||||||| || || || ||||| ||||||| | ||| || || | | Sbjct 416160 GAAATGTTTTCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAA- 416102 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 ||| || || | || ||| || |||||||| | || ||| |||| | || ||| || Sbjct 416101 AGCAACCAGTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCAT 416042 Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAA-CTCTTGTTCTATAGTTACGGCTT 4485 || | || || ||||| |||| | || | ||||| ||| || || |||| Sbjct 416041 ACCCAATAGAGAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTT 415983 Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATT-TACTAAGTATCCAAACA 4542 ||||||| || ||||| |||||| ||| || || || | | || || || | Sbjct 415982 CTGTGATGAT-TCTTTCGACA-ATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAAT-A 415926 Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602 ||||| ||||| || ||||||||||| ||||||| ||||| |||||| || || | Sbjct 415925 GCAAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGG 415866 Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662 | || || ||||| ||||| |||| || | ||| || || || || || || ||||| | Sbjct 415865 TCAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGA 415806 Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT 4722 | || | ||||| ||||| || ||||| || |||| || | || ||||| || Sbjct 415805 AAAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTA-TAG--GGCTTCGT 415749 Query 4723 CTT---TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATA 4779 | | ||||||| | | ||||| | ||| |||| || | ||||| || | | Sbjct 415748 CATCACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAA 415689 Query 4780 TAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839 | || || || || | ||| || || | || |||||||| || | | Sbjct 415688 TGGCATTCAACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACG 415629 Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899 ||| |||| || || || ||||| || ||| || || ||||| || || | |||| Sbjct 415628 AATAAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTT 415569 Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959 ||| | ||| || || | | || |||| || ||||||||||| || ||||| || Sbjct 415568 CTGGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGG 415509 Query 4960 TGGCTGCAAAAAACGCCA--AAACATGAGAT-ATAAAGTACT-GTTCGTCAGGCTTAAGT 5015 || ||||| ||||| | | | ||||| | ||| || |||| || | | Sbjct 415508 AAGCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTC-TCGTTCATTCTG 415450 Query 5016 TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCT 5075 || ||||||| | | ||| || | ||||| | ||||||| |||||||||| || || Sbjct 415449 TTGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCC 415390 Query 5076 TCCGCTTTTTTGTA 5089 || ||| | || || Sbjct 415389 TCGGCTCTCTTATA 415376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049553157997