Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq7 304 2e-77 seq3 217 2e-51 seq5 150 2e-31 >seq7 Length=940253 Score = 304 bits (336), Expect = 2e-77 Identities = 1365/2143 (64%), Gaps = 46/2143 (2%) Strand=Plus/Plus Query 76778 CAAT-GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTT 76836 |||| || ||||| || | | |||||| | || || | ||| |||||||||||||| | Sbjct 340298 CAATAGTGAACTGGATAGCGGCAGATGCAGCTTGAGTTCTTAGGTAGTACATACCAGTCT 340357 Query 76837 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGG 76896 | | |||| |||||||||||||||||||| |||| || | | || | Sbjct 340358 TCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTACCCATAGTTGGGGCAC 340417 Query 76897 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 76956 || ||||| |||| ||| || ||||||||| |||| | | ||||| ||||| | Sbjct 340418 GAATGTGAATGTTCAACGATTGGGATTGATCGATATAAGCAGCACGGTCAGCGGCCATAT 340477 Query 76957 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 77016 |||||| |||||| | |||||||||| ||| ||| | | | ||| | || | || Sbjct 340478 CGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAGTCTTTTAGCTCTTGTG 340537 Query 77017 GAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCAT 77073 | | ||||| ||||| || |||||| ||| | || || ||| ||| | | Sbjct 340538 GGATGTTTGGCAAGTTTTGGATAGAACCATTATCAGCGATGATATGGGACTTCATAGCTT 340597 Query 77074 CATTCCACAATTTCCTC-TCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAAT 77132 ||| ||| ||| || || ||| | | || | | ||| || || ||||| ||| Sbjct 340598 CATCCCA-AATACCCAAATCAACCAAATCACGTAGCAAGTAAGGGTTGACGATTTGGAAT 340656 Query 77133 TCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTG 77192 || ||||| || || | ||||| ||| || || || ||||| || | | | || ||| Sbjct 340657 TCACCAGATAACACACGACGAGAGTACATGTTGGAAGTGTATGGCTCGAAACACTCGTTG 340716 Query 77193 TTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTG 77252 | ||||| ||||| | || ||||| |||||||| || || | ||| ||| ||||| Sbjct 340717 TAACCCAAGATTTGGGATGTGGAAGCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTT 340776 Query 77253 AGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACA 77312 ||||| ||| |||||| | | || | | | ||| ||||| || | | || Sbjct 340777 AGACCGTGTTGCTTGATTTCAGCCTTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTC 340836 Query 77313 ACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCA 77372 | |||| |||||| |||||| | || | | || || || | | |||| Sbjct 340837 TTACCCCATAGATCGAATTGTAACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCA 340896 Query 77373 TAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTT 77432 || || |||||| | || | ||| ||||| | || || | || || ||| Sbjct 340897 TATGGACCTTCTTCCTTTGCCAATTCCATGGAGGCTTCACAAGCACCATGGTAGATAGTT 340956 Query 77433 TCGAAAATCTTCTTATTGAGATCT-TGTGCTTCAATACTATCAAACGGATAATGTAAAAG 77491 || || || | || | |||| | |||||| | ||||| || || ||| | Sbjct 340957 TCAAAGATTTGGACGTTCA-ATCTCTTTGCTTCTTCAGAGTCAAATGGCAAACGTAGCAT 341015 Query 77492 AATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 77551 || || || || ||||| || ||||| || | ||||||||||||||||| | || || Sbjct 341016 CATGAAAGCGTCGGCTAAACCTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGA 341075 Query 77552 AATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAAC 77611 || |||| | || |||||||| ||| ||| || ||| | || | || | | Sbjct 341076 TCTTCTAGCAGTTTCAACTGGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGT 341135 Query 77612 AACTACTTTAA----------CCACGTCCTTTAGTTTAAGAAAATCAAATCTT-CCATC- 77659 | || ||| | || || | |||| || | | |||| ||||| Sbjct 341136 CAAAACCTTAGAGATATCGTGCAACTTCTTGAAGTTGTAGGT--TTGAGTCTTACCATCG 341193 Query 77660 -----TATAACAAACAT-GTT--CAAAGCTATAGATGCTAGATTACAAACTGCTACCTCA 77711 ||| ||| | | | |||||| ||||| || | |||||||| || || Sbjct 341194 TTTGATATTTCAATGAACGCTGGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCT 341253 Query 77712 TTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGA 77771 | | ||| | |||| | || || ||| | || | | |||||||| |||| Sbjct 341254 TCTGGGTTAGAGTATTCAACGATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAG 341313 Query 77772 TTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTT 77831 || | ||| || ||||| || || || | ||||| || || || || || || || ||| Sbjct 341314 TTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTT 341373 Query 77832 TCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGT 77889 || | || | ||| | |||| | ||| | ||| | ||| || | | ||| | Sbjct 341374 TCGGTTTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGCCTTGACAGTC--TTTCT 341429 Query 77890 ATC---GCCTCTCTCTTTCATATTGA--GTATATAGCCGTTCAAATTCATCTCCCCAAAC 77944 | | |||| ||||| || || | ||| | || |||||||||||| || |||| Sbjct 341430 ACCACGGCCT-TCTCTCTCGTAACGTTCGTACAATGC--TTCAAATTCATCACCGTAAAC 341486 Query 77945 ATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAAC 78004 ||| || || || ||| ||||| | | ||| | ||| || | | | || || Sbjct 341487 ATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGAC 341546 Query 78005 TCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTC 78064 || ||||| || ||||| || |||||||| || || | |||| | | ||| Sbjct 341547 TCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCTTGCACGGATTTC 341606 Query 78065 TTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTC 78124 ||| || || |||||| | | |||| || || | ||||| || |||||||| || Sbjct 341607 TTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTC 341666 Query 78125 TAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGT 78184 | || | || | | ||||||| || ||||| || || || | || | || || Sbjct 341667 GATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACGAGCAGT 341726 Query 78185 GTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAAT 78244 ||| || |||| | | ||||||||||||||||||||| || || || || |||| ||| Sbjct 341727 GTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAAT 341786 Query 78245 ATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGA 78304 ||| || | | ||||| || |||| | || || || || || ||||||| Sbjct 341787 GTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGA 341846 Query 78305 TATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTT 78364 || | || || ||||| || ||||| ||||| || || || ||| ||||| Sbjct 341847 GATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGC 341906 Query 78365 AAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGA 78424 | || ||||| |||||||| ||||| ||| || ||||| || | ||| || || Sbjct 341907 CACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTTGGCGA 341966 Query 78425 TGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC 78484 || || || || || || ||| | ||| ||||| ||||| | | | ||| || || Sbjct 341967 AGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATC 342026 Query 78485 CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTT 78544 | || || || || || || | ||| | ||| || ||||| | |||| | ||| Sbjct 342027 TCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTCAGCAACCTT 342086 Query 78545 ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 78604 | || ||| | | |||||| || |||||| || || ||||| || |||||| || Sbjct 342087 ACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTAGTTGAATTG 342146 Query 78605 AAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATC 78664 || ||||| ||||| | ||| |||| || | ||||||||| | | || || || Sbjct 342147 GAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATCTTTGTTCTCCATGACGATGTC 342206 Query 78665 CATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAA 78724 || | ||||| ||||| || | | |||| | || || || || | | | Sbjct 342207 ATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCTTTGGGTTGACCCATCTGTA 342266 Query 78725 TAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGC 78784 || ||||| | || | ||| | || | |||| |||||| | ||||| | || Sbjct 342267 CAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGTGCAAGTTAGAAATGGC 342326 Query 78785 TATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGT-GGCTGCTATTT 78843 ||||| || || | | |||| ||||| || || || || || || ||| | ||| Sbjct 342327 AATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-CATGTAGGCACATGTTT 342385 Query 78844 CTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATA 78886 | || || || ||||||| || | ||| || || || | ||| Sbjct 342386 CAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 342428 >seq3 Length=1564943 Score = 217 bits (240), Expect = 2e-51 Identities = 588/890 (66%), Gaps = 30/890 (3%) Strand=Plus/Minus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| || || ||| | || ||||| ||||| ||||| || |||| || || ||| Sbjct 416211 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 416152 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 |||||||| || ||||| ||| | || || ||| || ||||| | | Sbjct 416151 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 416092 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGT 48029 ||||| |||||||| ||||| | ||| ||||||| ||| ||||| || | || Sbjct 416091 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 416032 Query 48030 TTAACTGGTAGAGCCTCCGT-AAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088 ||| |||||||| || | ||| | ||||| |||||| ||||| || | | Sbjct 416031 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTC------TGT 415979 Query 48089 CGATGTTACCGTTTCCTCACTTGGTGGATA---------CAACAAATGTTTAAACATTAA 48139 |||| | | |||| || | ||||| | |||||| | || | || Sbjct 415978 -GATGATTC--TTTCGACAATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAA 415922 Query 48140 ACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 48199 ||| ||||| || || | |||||||||||| | ||| |||||||| || || || | Sbjct 415921 ACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAA 415862 Query 48200 ACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAA 48259 ||| ||||| | || || || | ||| || || || ||||| || ||||| || || Sbjct 415861 ACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAA 415802 Query 48260 TATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---G 48316 | ||||| ||||| || || || | ||| || |||| |||||||| | | Sbjct 415801 CACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACG 415742 Query 48317 TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCAT 48375 ||||| | ||||| | |||||| |||||| | || || ||||| || |||| Sbjct 415741 AATCCATCTAATGGCCCATTGAGCCTT-TTCTTTGATTTGTGGAATGGTTTCAATGGCAT 415683 Query 48376 TAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACA 48435 | || | |||| | ||| || ||| || | |||||| || || || | ||| Sbjct 415682 TCAACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAG 415623 Query 48436 TTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGA 48495 |||||||||| || ||||| || || || || ||||| ||||| | ||||||| | Sbjct 415622 TTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAA 415563 Query 48496 TCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAG 48555 | || ||||| | | | || ||| |||| || || || || || ||||| ||||| Sbjct 415562 TTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAG 415503 Query 48556 CAAAAAATGCTAATACATGTTTA-ATAAAATATTTTTCGTTGGAAGTCAGT---TTATTC 48611 |||| || || | || | | | || ||| || | ||||| ||| | || ||| Sbjct 415502 CAAAGAACGCAAGCAC-TCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTC 415444 Query 48612 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCT 48671 ||||||| | ||| || || | ||| | ||||||||| |||||||| || ||||| ||| Sbjct 415443 CAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCT 415384 Query 48672 TTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 | ||||| | ||| || || ||| | ||||||||||| ||||| Sbjct 415383 CTCTTATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 415334 >seq5 Length=1351988 Score = 150 bits (166), Expect = 2e-31 Identities = 406/612 (66%), Gaps = 27/612 (4%) Strand=Plus/Minus Query 78002 AACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATG 78061 ||| |||| |||||| ||||| || |||||||||||| ||||| ||||||| || Sbjct 97064 AACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCAT 97005 Query 78062 TTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 78121 |||||| ||||| ||||||| | || | | || || |||||||| ||||||||| Sbjct 97004 TTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGG 96945 Query 78122 TTCTAGATATATTGCCATAA--CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTG 78179 ||| | ||||| || || | ||||| ||||| || || || ||||| | |||||| Sbjct 96944 TTCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTT 96887 Query 78180 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCA 78239 || ||||| ||| |||| | || ||| |||| | ||| || || || ||||| | || Sbjct 96886 GCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCT 96827 Query 78240 GAAATATAACTTCCACTTGCGCGAATATT--ACTAATGGATATCCCTATTCCTCCTGCCA 78297 || |||||| ||| |||| | ||||| || ||| ||| || || || || | Sbjct 96826 GAGATATAAGCACCATTTGCCCTTATATTTGACACATG--TATTCCAATACCACCAGATG 96769 Query 78298 TCTTAGATATTAGAGC-GCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCC 78356 ||| ||||| | ||| | || | || || | || ||||| || ||| ||| || Sbjct 96768 CCTTTGATATCAAAGCAGTCTTGTGT-AAAGTCTTATAAATACCATCAATAGAGTCTTCT 96710 Query 78357 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAAT 78416 ||| | |||||| || |||| | |||| || || || ||| || || Sbjct 96709 TCCATAGCCACAAGAAAGCATGATGACAAATATTGATTTACTGTACCGCTATTGAACAAA 96650 Query 78417 GTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGAT 78476 || || || || || |||| | |||| || | || | ||| || |||| ||| Sbjct 96649 GTAGGTGAAGCGTGAATAAAATACTTTTGTGACATTAATTGGTAAGTCTCAAGTACTGCA 96590 Query 78477 TCTATGTCCCATTGA--------TGAATTCCTACCGCTACACGCATCAACATATGCTGAG 78528 ||||| | |||| | ||||| | | || || | ||| |||||| ||| | Sbjct 96589 TCTATAT--CATTAAATGGTCCGTGAATAGCAAGAGCAACTCTCATGAACATAAACTGCG 96532 Query 78529 GTCTTTCAACCGT---CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAA--GTTTT 78583 | ||||| || || ||| ||| | |||| ||| ||||| || |||| || || Sbjct 96531 GAGTTTCATAAGTTTCCTCATTGTTTCTCTTCATCAAATATGA--CTTACAAAGTGTCTT 96474 Query 78584 AAAACCAAAATA 78595 |||||||||| Sbjct 96473 CCAACCAAAATA 96462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668721849760