Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq7 230 3e-55 seq3 197 2e-45 seq5 159 5e-34 >seq7 Length=940253 Score = 230 bits (254), Expect = 3e-55 Identities = 581/878 (66%), Gaps = 14/878 (2%) Strand=Plus/Plus Query 76350 ACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAA 76409 |||||||||| || | || | ||| || ||||| |||||||| | ||||| || || | Sbjct 341297 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 341356 Query 76410 CAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGC 76467 || || || |||||||| | || | ||| | |||| | ||| | ||| | ||| Sbjct 341357 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGC 341414 Query 76468 TTTTATTATAGATTTGTATCGCTTC--TCTCTTTCATATTGTGTATATAACCGTTCAAAT 76525 || | | ||| || | | | ||||| || || || || || ||||||| Sbjct 341415 CTTGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAAT 341472 Query 76526 TCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCA 76585 ||||| || ||||||| || || || ||| || ||| | | ||| | ||| || Sbjct 341473 TCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCT 341532 Query 76586 CCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 76645 | | | || || | ||||| || ||||| || |||||||| || || | ||| Sbjct 341533 TCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCT 341592 Query 76646 CGGGTTCTACG---TTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATA 76702 | || ||| |||||| || || |||||| | | || | ||| || | ||| Sbjct 341593 C---TTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATA 341649 Query 76703 TCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGA 76762 || || |||||||| || | || | || | |||| |||| || ||||| || || Sbjct 341650 TCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGG 341709 Query 76763 TCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA 76822 || | || | |||||||| || |||| | | |||||||||||| |||||||| ||| Sbjct 341710 TCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTA 341769 Query 76823 CCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATT 76882 || || || |||| ||| ||| || | |||||| || ||| | || || Sbjct 341770 CCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATA 341829 Query 76883 CCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATA 76942 || || || | |||||||| | ||||| ||||| ||||| || || || || || Sbjct 341830 CCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATG 341889 Query 76943 CTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 77002 ||| ||| ||||| | || ||||| |||||||| ||||| ||| || ||| Sbjct 341890 GAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCA 341949 Query 77003 TTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 77062 || || | ||| || || || || ||||| || || ||| | ||| ||||| ||||| Sbjct 341950 TTGAAAAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCC 342009 Query 77063 ATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGA 77122 | ||| ||| ||||| | || || || ||||| || | ||| | ||| || ||| Sbjct 342010 AAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGA 342069 Query 77123 GGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAA 77182 || ||||| || |||| || ||| | | |||||| || |||||| || || ||| Sbjct 342070 GGACGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAA 342129 Query 77183 CCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 || || |||||| || || ||||| ||||| | ||| Sbjct 342130 CCGAAGTAGTTGAATTGGAAATCTCTGTCGTAGACAAT 342167 >seq3 Length=1564943 Score = 197 bits (218), Expect = 2e-45 Identities = 578/881 (66%), Gaps = 12/881 (1%) Strand=Plus/Minus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| || || | || ||||| ||||| ||||| || |||| || || ||| Sbjct 416211 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 416152 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 |||||||| || || || ||||| || || || ||| || ||||| | | Sbjct 416151 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 416092 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 ||||| |||||||| ||||| | || ||||||| ||| ||||| || | || Sbjct 416091 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 416032 Query 46519 TTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577 || |||||||| || | ||| | ||||| ||| || ||||| || | || || Sbjct 416031 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 415973 Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637 | || | | | ||| | | ||||||| | || | ||||| ||||| Sbjct 415972 TCTTTCGACAATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAA 415913 Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697 || || | ||||||||||| | ||| |||||||| || || || | || ||||| Sbjct 415912 GTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCAT 415853 Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757 | || ||| || | ||| || || || ||||| || ||||| || || | ||||| Sbjct 415852 CAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTC 415793 Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGG---CATCATTATGAATCCACCT 46814 || || ||||| || || | ||| || |||| || | |||| | ||||||| || Sbjct 415792 CACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATCT 415733 Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 ||||| | |||||||| || | || || ||||| || ||||| || | || Sbjct 415732 AATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAA 415673 Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934 || | ||| | | ||| || | || || || || || | ||| |||| || || Sbjct 415672 GTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTG 415613 Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994 |||||||| || || || || ||||| ||||| | ||||| | ||| || ||||| Sbjct 415612 GATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTC 415553 Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054 | | | || ||| ||| || || ||||| || ||||| ||||||||| || || Sbjct 415552 AGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGC 415493 Query 47055 CAATACATGTTTA-ATAAAATATTTTTC---ATCGGT-AGTCAGTTTATTCCAGTCATTG 47109 | || | | | || ||| || | || ||| | | || | || |||||||||| Sbjct 415492 AAGCAC-TCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTG-TTGTTCCAGTCATGA 415435 Query 47110 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATAC 47169 | ||| || || | ||| | ||||||||| ||||| || || ||||| ||| | ||||| Sbjct 415434 AGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAA 415375 Query 47170 ATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 | ||| || || | || | ||| || |||| ||||| Sbjct 415374 GCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 415334 >seq5 Length=1351988 Score = 159 bits (176), Expect = 5e-34 Identities = 406/612 (66%), Gaps = 27/612 (4%) Strand=Plus/Minus Query 76597 AACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACG 76656 ||| |||| |||||| ||||| || |||||||||||| ||||| ||||||| || Sbjct 97064 AACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCAT 97005 Query 76657 TTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGG 76716 |||||| ||||| ||||||| | || | || ||| || |||||||| ||||||||| Sbjct 97004 TTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGG 96945 Query 76717 TTCTAGATATATCGCCATAA--CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTG 76774 ||| | ||||| || || |||| || ||||| || || || ||||| | |||||| Sbjct 96944 TTCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTT 96887 Query 76775 GCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCA 76834 || ||||| ||| |||| | || ||| |||| | || || || |||||||| | || Sbjct 96886 GCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCT 96827 Query 76835 GAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCC---TGCC 76891 || |||||| ||| ||| | ||||| | | || || || || || |||| Sbjct 96826 GAGATATAAGCACCATTTGCCCTTATATTTGACACATGTATTCCAATACCACCAGATGCC 96767 Query 76892 ATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCC 76951 || || || | |||| | || || | ||| || || || ||| || || Sbjct 96766 ---TTTGATATCAAAGCAGTCTTGTGTAAAGTCTTATAAATACCATCAATAGAGTCTTCT 96710 Query 76952 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAAT 77011 ||| | |||||| || |||| | |||| || || || ||| ||||| Sbjct 96709 TCCATAGCCACAAGAAAGCATGATGACAAATATTGATTTACTGTACCGCTATTGAACAAA 96650 Query 77012 GTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCT 77071 ||||| || || ||| | || | |||| || | || | ||| || |||| ||||| Sbjct 96649 GTAGGTGAAGCGTGAATAAAATACTTTTGTGACATTAATTGGTAAGTCTCAAGTACTGCA 96590 Query 77072 TCTATATCCCATTGA--------TGAATTCCTACAGCGACACGCATCAACATATGCTGAG 77123 ||||||| |||| | ||||| | | ||| || | ||| |||||| ||| | Sbjct 96589 TCTATAT--CATTAAATGGTCCGTGAATAGCAAGAGCAACTCTCATGAACATAAACTGCG 96532 Query 77124 GTCGTTCTACAGT---CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAA--GTTTT 77178 | ||| ||| || ||| ||| | |||| ||| ||||| || |||| || || Sbjct 96531 GAGTTTCATAAGTTTCCTCATTGTTTCTCTTCATCAAATATGA--CTTACAAAGTGTCTT 96474 Query 77179 AAAACCAAAATA 77190 |||||||||| Sbjct 96473 CCAACCAAAATA 96462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934319794880