Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq5 111 4e-19 seq2 102 2e-16 seq3 98.7 2e-15 >seq5 Length=1351988 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| ||||| || |||||||||||||| || | |||||||| |||||||| | Sbjct 1201218 CAAG-TGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCA 1201160 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | || || ||||| | | || |||||||| ||||| | Sbjct 1201159 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGA 1201100 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | | |||| ||| || ||||| | |||||||| || | Sbjct 1201099 TCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGTCTTAC 1201040 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||| ||||| | ||||| Sbjct 1201039 CAGTTAGGGTCTTGACGAAAATTTGCAT 1201012 >seq2 Length=1688883 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || || |||||||||||||| |||| || |||||| || ||||||| Sbjct 908646 CAAG-TGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTA 908588 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| || || || || | || || ||||| | | || ||||| || ||||||| Sbjct 908587 ATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATCTTGAA 908528 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || ||| | || | |||| ||| || ||||| | ||| ||||| || | Sbjct 908527 TCTTAGACTTCACATTATCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTAC 908468 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| ||||||| ||||| Sbjct 908467 CTGTCAAAGTCTTGACGAAGATTTGCAT 908440 >seq3 Length=1564943 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | ||| | ||||| || || || |||||||||||||| || | |||||| Sbjct 1518415 CTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTT 1518474 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || ||||| | || || || ||||| | || || ||||| | | || ||| Sbjct 1518475 CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCT 1518534 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| |||||||| || |||||| | || | | |||| ||| || ||||| | | Sbjct 1518535 TCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAAA 1518594 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095 || || || || || || | ||||| ||||| Sbjct 1518595 GTGATGGTCTTACCAGTCAAGGTCTTGACGAA 1518626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820666950039