Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq2 170 4e-37
seq3 150 4e-31
seq5 149 1e-30
seq7 91.5 3e-13
>seq2
Length=1688883
Score = 170 bits (188), Expect = 4e-37
Identities = 153/192 (80%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||| ||||||||||||| || || | || || |||| |||||| || |||||
Sbjct 908175 TTCCTTTTGAATGTTGTAGTCAGATAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAA 908116
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| | ||||||||| |||||||| ||||||||||| ||||| | || || |
Sbjct 908115 AATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCACATT 908056
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| |||| ||||||||| | |||||| |||||||| ||||||||||| ||
Sbjct 908055 GTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGAC 907996
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 907995 GAAGATTTGCAT 907984
Score = 170 bits (188), Expect = 4e-37
Identities = 153/192 (80%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||| ||||||||||| | || || | || || |||| |||||| || |||||
Sbjct 908403 TTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAA 908344
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| | ||||||||| |||||||| ||||||||||| ||||| | ||| || |
Sbjct 908343 AATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGATTTCACATT 908284
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| |||| ||||||||| | |||||| |||||||| ||||||||||| ||
Sbjct 908283 GTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGAC 908224
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 908223 GAAGATTTGCAT 908212
Score = 167 bits (184), Expect = 5e-36
Identities = 152/192 (79%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||| | || || | || || |||| |||||| || |||||
Sbjct 908631 TTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAA 908572
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| | ||||||||| |||||||| || || ||||| ||||| | || || |
Sbjct 908571 AATCAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATCTTGAATCTTAGACTTCACATT 908512
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||| |||||||| |||| ||||||||| | |||||| |||||||| ||||||||||| ||
Sbjct 908511 ATCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGAC 908452
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 908451 GAAGATTTGCAT 908440
Score = 158 bits (174), Expect = 3e-33
Identities = 152/195 (78%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||| ||||||||||||| || || | || || |||| |||||| || |||||
Sbjct 907947 TTCCTTTTGAATGTTGTAGTCAGATAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAA 907888
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| | ||||||||| |||||||| ||||| ||||||||||| | || || |
Sbjct 907887 AATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTATCTTGGATCTTAGACTTCACATT 907828
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| |||| ||| ||||| | |||||| |||||||| || || ||||| ||
Sbjct 907827 GTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCTGTTAACGTCTTGAC 907768
Query 283088 GAATATCTGCATTTT 283102
|| || ||||||||
Sbjct 907767 AAAGATTTGCATTTT 907753
>seq3
Length=1564943
Score = 150 bits (166), Expect = 4e-31
Identities = 143/183 (78%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| | || | || || || | ||| || || |||||
Sbjct 1518444 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAA 1518503
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||||||||| |||||||| ||||||||||| ||||| | || || |
Sbjct 1518504 GATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATT 1518563
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| |||| ||||||||| | |||||| |||||||| ||||| ||||| ||
Sbjct 1518564 GTCAATGGTGTCAGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGAC 1518623
Query 283088 GAA 283090
|||
Sbjct 1518624 GAA 1518626
Score = 84.2 bits (92), Expect = 5e-11
Identities = 124/176 (70%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085
|| ||||| || || | |||||||| | || || ||||||| || ||||| ||||||
Sbjct 315080 GTTGGGAAACCGTCAACTTGACCGTTGGCGATAGCTCTCATCAAGGTAGACTTACCAGCA 315139
Query 317086 CCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145
|| || || || || | ||| || | | | |||||| | || | || ||||||
Sbjct 315140 CCGTTTGGACCACACAAACCGTATCTTCTGGCTCTCTTCAATCTCAATTGAGTCTTGTTC 315199
Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
| | ||||| |||| || |||| |||||||||||| | ||||| ||| || ||
Sbjct 315200 AACAAGATCTTGGCACCGTAAGCCAAAGAGAACTCACAGTTACACAAGTCTTCACC 315255
>seq5
Length=1351988
Score = 149 bits (164), Expect = 1e-30
Identities = 148/192 (77%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| | || | ||||| || | ||| || || |||||
Sbjct 1201203 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 1201144
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||||||||| |||||||| ||||||||||||||||| | || || |
Sbjct 1201143 GATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTTAGACTTGACATT 1201084
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| |||| ||||||||| | || || |||||||| || | ||||| ||
Sbjct 1201083 GTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGAC 1201024
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 1201023 GAAAATTTGCAT 1201012
>seq7
Length=940253
Score = 91.5 bits (100), Expect = 3e-13
Identities = 181/263 (69%), Gaps = 9/263 (3%)
Strand=Plus/Plus
Query 301426 AAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAA 301485
||||| ||||| || || ||| ||||| | || || ||| || ||||||| |||
Sbjct 155019 AAAATCGACCCATACATGAACCTCGATGCAGGTACAATGTCTCCTTTGGAACATGGTGAA 155078
Query 301486 GTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTC 301545
|| ||| | | ||||||| ||| |||||| ||||| |||| |||| |||||||
Sbjct 155079 TGTTTTGTGTTGAACGATGGTGGTGAGACCGATTTGGATTTGGGTAACTATGAACGTT-- 155136
Query 301546 ACTTCA---TTAACCCTTAAGC-GTGAAAGTAATTTTACGACTGGCCAAGTTTATTTAAA 301601
|||| | ||| | |||| | | || ||| | || ||||| | ||||| | |
Sbjct 155137 ACTTGAACGTTA--CTTTAACCAGAGACCATAACATCACTACTGGTAAGGTTTACTCTCA 155194
Query 301602 AGTTATCGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTGTTCCCCA 301661
||||| | || ||||| | ||| ||| | || ||||| |||||||||||||| ||
Sbjct 155195 TGTTATTGCCAAGGAACGTAAGGGTGATTATTTGGGTAAGACCGTGCAAGTTGTTCCTCA 155254
Query 301662 CATCACCGATGAAATCAAAAGAA 301684
| ||| | ||||| | |||||
Sbjct 155255 TTTGACCAACGAAAT-ACAAGAA 155276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046739079297886
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |