Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq3 150 2e-31
>seq3
Length=1564943
Score = 150 bits (166), Expect = 2e-31
Identities = 536/823 (65%), Gaps = 21/823 (3%)
Strand=Plus/Minus
Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299
||||||| ||||| || ||||| | || || || ||||||||||| || ||||| ||||
Sbjct 416189 TTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAATGGGTTAG 416130
Query 23300 AAGTATTATA-TACAGCTT--TACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATT 23356
|| || || ||| ||| | | || || | || ||||| |||||||
Sbjct 416129 TGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTA---GTCTGTCTGCAACAAATT 416073
Query 23357 CAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCAT 23416
| | ||||| |||||||||| ||| ||||| | ||| || || | || ||
Sbjct 416072 CGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGCGTCGA 416013
Query 23417 ATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATT---TGAACAATAACTTCTT 23473
||| || ||||| || |||||| ||| | || ||| | ||||| |||
Sbjct 416012 TGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAAT--CTTTGG 415955
Query 23474 CACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTT 23533
|| | | | | || |||| | || | ||||| ||||| || || | ||||
Sbjct 415954 ATCTGGCTTGTTCTTC-AAATGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAAACCTT 415896
Query 23534 CATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAA 23593
|||| || | ||||||||| || || || || || |||||||| || || || || |
Sbjct 415895 CATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTTCTTCA 415836
Query 23594 TCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCA 23653
||| || || ||||| || || || || || || | ||| || || || || || || |
Sbjct 415835 ACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAACGCAA 415776
Query 23654 CAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCT 23713
| | | | | | || || | | |||| ||||||| | | | ||| | |||||
Sbjct 415775 CCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATCTAATGGCCCATTGAGCCT 415716
Query 23714 TCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTT-TTCTTCATTA 23772
| ||| | ||| |||||||| || || || | | |||| | ||| | | |
Sbjct 415715 TTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACA-AGAAGTCGTGTTCCTTAGGA 415657
Query 23773 TCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCA 23832
|| | || || || ||||| | || ||| |||| || || || ||||| || |
Sbjct 415656 TCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTGGATGTTTTCCATCATA 415597
Query 23833 ATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTA 23892
|| || || || || ||||| | ||||| | | ||| || ||| | | || |||
Sbjct 415596 ATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAGAAGTTTTCC 415537
Query 23893 GCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT- 23951
| || |||||||| || |||||||| |||||||||||| ||||| || ||
Sbjct 415536 ACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACTCTGGAGATG 415477
Query 23952 -AAAATGTCT--TTCATCAGTTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAAT 24007
||||| ||| ||| || ||| || | || ||||| |||| || ||| || || ||||
Sbjct 415476 AAAAATCTCTCGTTC-TC-GTTCATTCTGTTGTTCCAGTCATGAAGATCCTTGGACAAAT 415419
Query 24008 CAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATA 24050
| | ||| ||| | ||||||||| ||| ||| | ||||||
Sbjct 415418 CGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATA 415376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521487941332600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |