Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq5 138 8e-28
seq3 116 3e-21
seq2 111 1e-19
>seq5
Length=1351988
Score = 138 bits (152), Expect = 8e-28
Identities = 172/232 (74%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||||| |||||| |||| |||||| || ||||||||||||||||| || |
Sbjct 1201238 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 1201179
Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
| ||| | | || |||| ||||| || ||||||||||| | || || |||| ||
Sbjct 1201178 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAG 1201121
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | ||||||||| || ||||| ||| || ||| | |||||||||| |||||
Sbjct 1201120 GAATACCTTCCTTGTCTTGGATCTTAGACTTGACATTGT--CAATGGTGTCGGAAGATTC 1201063
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| |||| ||||| ||||| || || |||||||| ||||| |||||||||
Sbjct 1201062 GACTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCATG 1201011
>seq3
Length=1564943
Score = 116 bits (128), Expect = 3e-21
Identities = 163/225 (72%), Gaps = 8/225 (4%)
Strand=Plus/Plus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||| |||||||| |||| |||||| ||| ||||||||||||||||| ||
Sbjct 1518406 ATACCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCA 1518465
Query 44168 GCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| | ||| | |||| |||| ||||| || ||||||||||| | || || ||||
Sbjct 1518466 GACAAAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTG 1518523
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283
|| | ||||||||| || ||||| ||| || ||| | |||||||| | ||
Sbjct 1518524 GTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGT--CAATGGTGTCAGAAGA 1518581
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328
||| || |||| || || ||||| || || | |||||| |||||
Sbjct 1518582 TTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 1518626
>seq2
Length=1688883
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169
|| ||||||| ||||| |||| ||| || ||| ||||||||||||||||| ||||
Sbjct 908666 CCTCCTCTCAACCTCAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGAT 908607
Query 44170 -GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
||||| | |||| || | || || || ||||| ||||| | || || |||| ||
Sbjct 908606 AGAGTT--CTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAG 908549
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288
| | |||||| || || ||||| ||||| | | || ||||| | ||||| |
Sbjct 908548 GAATACCTTCTTTATCTTGAATCTTAGACTTCACATTATCAATAGTGTCAGAAGATTCGA 908489
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| |||| || || ||||| || || | ||||| ||||||||||||||
Sbjct 908488 CTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 908440
Score = 109 bits (120), Expect = 4e-19
Identities = 167/236 (71%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| |||||| || | |||||| || |||||||| ||||||||
Sbjct 908217 TTGCATACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTA 908158
Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|| | ||||| | |||| || | || || || ||||| ||||| | || ||
Sbjct 908157 GTCAGATAGAGTT--CTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGG 908100
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281
|||| ||| | ||||||||| || ||||| ||||| | | || ||||| |
Sbjct 908099 TCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAA 908040
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || |||| || || ||||| || || | ||||| ||||||||||||||
Sbjct 908039 GATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 907984
Score = 109 bits (120), Expect = 4e-19
Identities = 167/236 (71%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| |||||| || | |||||| || |||||||| ||||||||
Sbjct 908445 TTGCATACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTA 908386
Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|||| ||||| | |||| || | || || || ||||| ||||| | || ||
Sbjct 908385 GTCGGATAGAGTT--CTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGG 908328
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281
|||| ||| | ||||||||| || ||||| |||| | | || ||||| |
Sbjct 908327 TCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGATTTCACATTGTCAATAGTGTCAGAA 908268
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || |||| || || ||||| || || | ||||| ||||||||||||||
Sbjct 908267 GATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 908212
Score = 105 bits (116), Expect = 5e-18
Identities = 166/236 (70%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| |||||| || | |||||| || |||||||| ||||||||
Sbjct 907989 TTGCATACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTA 907930
Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|| | ||||| | |||| || | || || || ||||| ||||| | || ||
Sbjct 907929 GTCAGATAGAGTT--CTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGG 907872
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281
|||| ||| | ||||||||| || ||||| ||||| | | || ||||| |
Sbjct 907871 TCTGGAGGAATACCTTCCTTATCTTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAA 907812
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || |||| || || ||||| || || | ||||| || |||||||||||
Sbjct 907811 GATTCAACTTCCAAAGTGATGGTCTTACCTGTTAACGTCTTGACAAAGATTTGCAT 907756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990360513553
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |