Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1 134 1e-26 >seq1 Length=4213555 Score = 134 bits (148), Expect = 1e-26 Identities = 287/429 (67%), Gaps = 0/429 (0%) Strand=Plus/Plus Query 16201 ACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAA 16260 ||| || |||||| || | ||||| ||||||| || | |||||| || || || || Sbjct 1143793 ACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAA 1143852 Query 16261 CCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAA 16320 |||||||| || ||||| |||||||| || |||||||| || || || || || Sbjct 1143853 ACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAA 1143912 Query 16321 TATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACG 16380 | ||| || || | || || || | |||| ||| ||||| || || | || ||| Sbjct 1143913 CACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACG 1143972 Query 16381 AATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTT 16440 ||||||| | |||||| || |||| ||| || || ||||| ||||| || Sbjct 1143973 AATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATT 1144032 Query 16441 AAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACAT 16500 ||||| || | ||||| | ||| | || || || ||||||| || || | Sbjct 1144033 CAACAAGAATTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGT 1144092 Query 16501 TTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTAT 16560 ||| ||||| ||||| || || || || || || ||||| || || || | || Sbjct 1144093 TTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAAT 1144152 Query 16561 TTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGC 16620 ||| || || | | || |||| ||| ||| || ||||||||||| || ||||| Sbjct 1144153 TTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGC 1144212 Query 16621 AAAAAACGC 16629 ||| ||||| Sbjct 1144213 AAAGAACGC 1144221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413760732000