Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 1e-21
>seq1
Length=4213555
Score = 118 bits (130), Expect = 1e-21
Identities = 405/625 (65%), Gaps = 11/625 (2%)
Strand=Plus/Minus
Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTAC 116650
|||||| || || || ||| ||||||| || | |||| || || ||| ||
Sbjct 1144395 GAGAACAAGCGTCGTTTTGTGCTTTTCCCAATCAAGTACCACGAAATCTGGGAGGCTTAT 1144336
Query 116651 AAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGC 116710
|| | |||||||| || || ||||| | || || | || ||||||||||
Sbjct 1144335 AAGAGAGCCGAGGCCTCTTTTTGGACTGCTGAAGAAATCGATTTGTCCAAGGATCTTCAT 1144276
Query 116711 GACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTT 116767
|||||| | | ||||||| |||||| | ||||||| ||||| || ||
Sbjct 1144275 GACTGGAACAACAGAATGAACGAGAACGAGAGATTTTTCATCTCCAGAGTGCTTGCGTTC 1144216
Query 116768 TTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTG 116827
|| || || ||| || ||||| ||||| || |||| || ||| || ||||||
Sbjct 1144215 TTTGCTGCTTCCGATGGTATCGTGAACGAAAACTTGGTGGAAAACTTCTCTGCTGAGGTG 1144156
Query 116828 CAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCG 116887
|| | | || || ||| |||||||| || || || ||||| ||| | |||||
Sbjct 1144155 CAAATTCCAGAAGCCAAGTGTTTCTACGGTTTCCAAATTATGATGGAAAACATCCACTCC 1144096
Query 116888 GAAATGTATTCGACCCTCATCGACACGTACGTGC--GCTCTTC-GGAGGAGAAGCTCCGT 116944
|||| |||||| | || ||||| ||| | | || | ||| | | ||
Sbjct 1144095 GAAACTTATTCGTTGTTGATTGACACTTACATCAAGGATCCTAAGGAACACGAATTC--- 1144039
Query 116945 TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGC 117004
|||||||| ||||| || || || || ||||||| ||||| | ||||| | |
Sbjct 1144038 TTGTTGAATGCCATTGAAACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGA 1143979
Query 117005 TGGATCGCCGGCAGA-GAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGA 117063
||||| | | || || ||| | || || | |||| || ||||| ||||| ||
Sbjct 1143978 TGGATT-CGTGATGACGAAGCCCTATACGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGA 1143920
Query 117064 GGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCAT 117123
|| || || || || || || || ||||| || ||| | ||||| || | ||
Sbjct 1143919 AGGTGTGTTTTTCTCTGGTTCCTTTGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGAT 1143860
Query 117124 GCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTT 117183
||| || |||| ||| ||||| | || | ||| || || ||| |||| ||||||
Sbjct 1143859 GCCAGGTTTGACCTTCTCAAACGAATTGATTTGCAGAGATGAAGGTTTGCACACCGACTT 1143800
Query 117184 TGCCTGTTTGCTGTTCAAGCATTTG 117208
|||||||||||| ||| | ||||||
Sbjct 1143799 TGCCTGTTTGCTATTCCATCATTTG 1143775
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218555976000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |