Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 >seq1 Length=4213555 Score = 118 bits (130), Expect = 1e-21 Identities = 405/625 (65%), Gaps = 11/625 (2%) Strand=Plus/Minus Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTAC 116650 |||||| || || || ||| ||||||| || | |||| || || ||| || Sbjct 1144395 GAGAACAAGCGTCGTTTTGTGCTTTTCCCAATCAAGTACCACGAAATCTGGGAGGCTTAT 1144336 Query 116651 AAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGC 116710 || | |||||||| || || ||||| | || || | || |||||||||| Sbjct 1144335 AAGAGAGCCGAGGCCTCTTTTTGGACTGCTGAAGAAATCGATTTGTCCAAGGATCTTCAT 1144276 Query 116711 GACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTT 116767 |||||| | | ||||||| |||||| | ||||||| ||||| || || Sbjct 1144275 GACTGGAACAACAGAATGAACGAGAACGAGAGATTTTTCATCTCCAGAGTGCTTGCGTTC 1144216 Query 116768 TTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTG 116827 || || || ||| || ||||| ||||| || |||| || ||| || |||||| Sbjct 1144215 TTTGCTGCTTCCGATGGTATCGTGAACGAAAACTTGGTGGAAAACTTCTCTGCTGAGGTG 1144156 Query 116828 CAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCG 116887 || | | || || ||| |||||||| || || || ||||| ||| | ||||| Sbjct 1144155 CAAATTCCAGAAGCCAAGTGTTTCTACGGTTTCCAAATTATGATGGAAAACATCCACTCC 1144096 Query 116888 GAAATGTATTCGACCCTCATCGACACGTACGTGC--GCTCTTC-GGAGGAGAAGCTCCGT 116944 |||| |||||| | || ||||| ||| | | || | ||| | | || Sbjct 1144095 GAAACTTATTCGTTGTTGATTGACACTTACATCAAGGATCCTAAGGAACACGAATTC--- 1144039 Query 116945 TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGC 117004 |||||||| ||||| || || || || ||||||| ||||| | ||||| | | Sbjct 1144038 TTGTTGAATGCCATTGAAACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGA 1143979 Query 117005 TGGATCGCCGGCAGA-GAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGA 117063 ||||| | | || || ||| | || || | |||| || ||||| ||||| || Sbjct 1143978 TGGATT-CGTGATGACGAAGCCCTATACGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGA 1143920 Query 117064 GGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCAT 117123 || || || || || || || || ||||| || ||| | ||||| || | || Sbjct 1143919 AGGTGTGTTTTTCTCTGGTTCCTTTGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGAT 1143860 Query 117124 GCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTT 117183 ||| || |||| ||| ||||| | || | ||| || || ||| |||| |||||| Sbjct 1143859 GCCAGGTTTGACCTTCTCAAACGAATTGATTTGCAGAGATGAAGGTTTGCACACCGACTT 1143800 Query 117184 TGCCTGTTTGCTGTTCAAGCATTTG 117208 |||||||||||| ||| | |||||| Sbjct 1143799 TGCCTGTTTGCTATTCCATCATTTG 1143775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218555976000