Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 2e-17
>seq1
Length=4213555
Score = 104 bits (114), Expect = 2e-17
Identities = 290/436 (67%), Gaps = 13/436 (3%)
Strand=Plus/Minus
Query 44852 GCCGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCG 44911
|| ||| ||||||| || ||||| || ||||| ||||| || || || |||||
Sbjct 1143951 GCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTTGCT 1143892
Query 44912 GCGATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTG 44971
|| || || | |||| | ||||| ||||||| || |||| || |||||||||
Sbjct 1143891 GCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCAAACGAATTG 1143832
Query 44972 ATTTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTATAATACGAGAGTC 45031
|||| ||||| |||||| |||||||| |||||||||| | | |||| | | | |
Sbjct 1143831 ATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTG--TTTGCTAT--TCCATCATTT 1143776
Query 45032 GATCAA-AAGTTGGACGCGCCCACCGTC-AACGACATGTTCTCCGAAGCCGTGGCCATCG 45089
|| || ||| || | | ||| || || || || | ||||| || | ||||
Sbjct 1143775 GAAGAACAAGCCAGATCCAAAGATTGTCGAAAGA-ATCATCACAGAAGCTGTTGAGATCG 1143717
Query 45090 AGATGGAATTTTTTGCTGAGGCTCTGCCCGAATCGTTGGTGGGAATGAACGCGAATATGA 45149
| | | || || || ||||| |||| || | |||| |||||||| || |||
Sbjct 1143716 AAAAGAGATACTTCATCGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTGA 1143657
Query 45150 TGAGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCAGTTAAAGTATCCCAAGA 45209
||| | ||| | || ||||| || || | || || || || | ||| |||||
Sbjct 1143656 TGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGT-TGCTTTAGGTA--ACAAGA 1143600
Query 45210 TGTACTATACTG---AGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAAA 45266
||||| | | ||||||||||| |||||| | || ||||| |||| || ||||
Sbjct 1143599 AATACTACAACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAAA 1143540
Query 45267 CTAAtttttttGAGAA 45282
| ||||| || || ||
Sbjct 1143539 CCAATTTCTTCGAAAA 1143524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433829871269200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |