Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 >seq1 Length=4213555 Score = 104 bits (114), Expect = 2e-17 Identities = 290/436 (67%), Gaps = 13/436 (3%) Strand=Plus/Minus Query 44852 GCCGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCG 44911 || ||| ||||||| || ||||| || ||||| ||||| || || || ||||| Sbjct 1143951 GCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTTGCT 1143892 Query 44912 GCGATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTG 44971 || || || | |||| | ||||| ||||||| || |||| || ||||||||| Sbjct 1143891 GCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCAAACGAATTG 1143832 Query 44972 ATTTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTATAATACGAGAGTC 45031 |||| ||||| |||||| |||||||| |||||||||| | | |||| | | | | Sbjct 1143831 ATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTG--TTTGCTAT--TCCATCATTT 1143776 Query 45032 GATCAA-AAGTTGGACGCGCCCACCGTC-AACGACATGTTCTCCGAAGCCGTGGCCATCG 45089 || || ||| || | | ||| || || || || | ||||| || | |||| Sbjct 1143775 GAAGAACAAGCCAGATCCAAAGATTGTCGAAAGA-ATCATCACAGAAGCTGTTGAGATCG 1143717 Query 45090 AGATGGAATTTTTTGCTGAGGCTCTGCCCGAATCGTTGGTGGGAATGAACGCGAATATGA 45149 | | | || || || ||||| |||| || | |||| |||||||| || ||| Sbjct 1143716 AAAAGAGATACTTCATCGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTGA 1143657 Query 45150 TGAGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCAGTTAAAGTATCCCAAGA 45209 ||| | ||| | || ||||| || || | || || || || | ||| ||||| Sbjct 1143656 TGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGT-TGCTTTAGGTA--ACAAGA 1143600 Query 45210 TGTACTATACTG---AGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAAA 45266 ||||| | | ||||||||||| |||||| | || ||||| |||| || |||| Sbjct 1143599 AATACTACAACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAAA 1143540 Query 45267 CTAAtttttttGAGAA 45282 | ||||| || || || Sbjct 1143539 CCAATTTCTTCGAAAA 1143524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829871269200