Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1 185 8e-42 >seq1 Length=4213555 Score = 185 bits (204), Expect = 8e-42 Identities = 533/811 (66%), Gaps = 13/811 (2%) Strand=Plus/Plus Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018 ||||||||||| |||||||| ||||| || | || ||||| ||||||||||| || || Sbjct 1143518 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 1143577 Query 16019 GGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAATAATCTATCCGCCACA 16078 || || | |||||||| | | || || | | || || ||| || || ||| Sbjct 1143578 GGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAACA 1143637 Query 16079 AATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATTGCT 16138 ||||| | || || ||||| |||||| |||||| || | || ||| || | || Sbjct 1143638 AATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGCG 1143697 Query 16139 TCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACACTA 16198 || | || | | ||||| || | ||| ||||| |||| || |||| | ||| | Sbjct 1143698 TCGATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGAT---TCTTTCGACAATC 1143754 Query 16199 TTT--AAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAAGCAAAATCACAATGCAAT 16255 ||| | | || ||| || || | || | | ||| ||||| || ||||| Sbjct 1143755 TTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAAA 1143814 Query 16256 CCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTT 16315 ||||| || || | || || |||||||| || || | ||||||||| | || || Sbjct 1143815 CCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTTC 1143874 Query 16316 TTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAAT 16375 || | ||| || || || ||||| |||||||| || || | |||||| || || || || Sbjct 1143875 TTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAAC 1143934 Query 16376 GCAACCAATCGCTCACCGTA-CGTTCTAtttttactttctatccattttttagcccaatt 16434 |||||||||| ||| |||| | || | | | |||||| | | ||||| | Sbjct 1143935 GCAACCAATCTTTCAGCGTATAGGGCT-TCGTCATCACGAATCCATCTAATGGCCCATTG 1143993 Query 16435 tgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtttttttCTTT 16494 || |||| ||| | ||| | || || ||||| || || | | | ||| || Sbjct 1143994 AGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAATTCGTGTTCCTT 1144053 Query 16495 GCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCAT 16554 ||| || ||||| || || | || ||| |||| || || || || ||||| Sbjct 1144054 AGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTGGATGTTTTCCAT 1144113 Query 16555 TGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCT 16614 || || ||||| || || || | ||||| | ||||| || |||| | || | Sbjct 1144114 CATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAGAAGTT 1144173 Query 16615 TTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTA-TGTGTT 16673 ||| | ||||||||||| || || |||||| ||| ||||| |||||||| | | || Sbjct 1144174 TTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACTCTG-G 1144232 Query 16674 TAATAAAAtttttttCGTTATCTGAAAGT---TTTAACCAGTCAGAAAAATCTTTTGATA 16730 || ||| | | ||||| || | | || ||||||| || ||| || || | Sbjct 1144233 AGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGAAGATCCTTGGACA 1144292 Query 16731 AATCGACCTCTTCTACAGTCCAAAAAGAAGC 16761 |||||| ||||| ||||||||||||| || Sbjct 1144293 AATCGATTTCTTCAGCAGTCCAAAAAGAGGC 1144323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511421860000