Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq1 185 8e-42
>seq1
Length=4213555
Score = 185 bits (204), Expect = 8e-42
Identities = 533/811 (66%), Gaps = 13/811 (2%)
Strand=Plus/Plus
Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018
||||||||||| |||||||| ||||| || | || ||||| ||||||||||| || ||
Sbjct 1143518 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 1143577
Query 16019 GGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAATAATCTATCCGCCACA 16078
|| || | |||||||| | | || || | | || || ||| || || |||
Sbjct 1143578 GGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAACA 1143637
Query 16079 AATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATTGCT 16138
||||| | || || ||||| |||||| |||||| || | || ||| || | ||
Sbjct 1143638 AATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGCG 1143697
Query 16139 TCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACACTA 16198
|| | || | | ||||| || | ||| ||||| |||| || |||| | ||| |
Sbjct 1143698 TCGATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGAT---TCTTTCGACAATC 1143754
Query 16199 TTT--AAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAAGCAAAATCACAATGCAAT 16255
||| | | || ||| || || | || | | ||| ||||| || |||||
Sbjct 1143755 TTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAAA 1143814
Query 16256 CCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTT 16315
||||| || || | || || |||||||| || || | ||||||||| | || ||
Sbjct 1143815 CCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTTC 1143874
Query 16316 TTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAAT 16375
|| | ||| || || || ||||| |||||||| || || | |||||| || || || ||
Sbjct 1143875 TTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAAC 1143934
Query 16376 GCAACCAATCGCTCACCGTA-CGTTCTAtttttactttctatccattttttagcccaatt 16434
|||||||||| ||| |||| | || | | | |||||| | | ||||| |
Sbjct 1143935 GCAACCAATCTTTCAGCGTATAGGGCT-TCGTCATCACGAATCCATCTAATGGCCCATTG 1143993
Query 16435 tgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtttttttCTTT 16494
|| |||| ||| | ||| | || || ||||| || || | | | ||| ||
Sbjct 1143994 AGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAATTCGTGTTCCTT 1144053
Query 16495 GCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCAT 16554
||| || ||||| || || | || ||| |||| || || || || |||||
Sbjct 1144054 AGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTGGATGTTTTCCAT 1144113
Query 16555 TGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCT 16614
|| || ||||| || || || | ||||| | ||||| || |||| | || |
Sbjct 1144114 CATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAGAAGTT 1144173
Query 16615 TTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTA-TGTGTT 16673
||| | ||||||||||| || || |||||| ||| ||||| |||||||| | | ||
Sbjct 1144174 TTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACTCTG-G 1144232
Query 16674 TAATAAAAtttttttCGTTATCTGAAAGT---TTTAACCAGTCAGAAAAATCTTTTGATA 16730
|| ||| | | ||||| || | | || ||||||| || ||| || || |
Sbjct 1144233 AGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGAAGATCCTTGGACA 1144292
Query 16731 AATCGACCTCTTCTACAGTCCAAAAAGAAGC 16761
|||||| ||||| ||||||||||||| ||
Sbjct 1144293 AATCGATTTCTTCAGCAGTCCAAAAAGAGGC 1144323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511421860000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |