Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq1 143 3e-29 >seq1 Length=4213555 Score = 143 bits (158), Expect = 3e-29 Identities = 295/434 (68%), Gaps = 6/434 (1%) Strand=Plus/Plus Query 14201 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 14260 ||||| ||||| || || | || |||||||| | ||| | ||||||||| || || Sbjct 1143791 AAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTC 1143850 Query 14261 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 14320 || ||||||||||| || || || ||||| || || ||||| || || || || || Sbjct 1143851 AAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAA 1143910 Query 14321 AATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-T 14379 || | || || || ||||| ||||| | |||| ||| | | |||| | | Sbjct 1143911 AACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCA 1143970 Query 14380 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14439 ||| |||||| | | ||||||| || |||| ||| || || |||||||| || Sbjct 1143971 CGA-ATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGC 1144029 Query 14440 ATTAAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTA 14497 ||| || || ||| | || |||| | |||| ||||| || ||||| | || | Sbjct 1144030 ATTCAACAAGAATTCGTGTTCCTTAGGATCCTTG--ATGTAAGTGTCAATCAACAACGAA 1144087 Query 14498 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14557 || |||| ||||| ||||||||||| || || ||||| || ||||| | |||||| Sbjct 1144088 TAAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCT 1144147 Query 14558 GACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14617 | ||| ||||| | | || |||| |||| ||||| || || |||||||| | Sbjct 1144148 GGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAA 1144207 Query 14618 GCTGCAAAAAATGC 14631 || ||||| || || Sbjct 1144208 GCAGCAAAGAACGC 1144221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482344997068000