Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq1 143 3e-29
>seq1
Length=4213555
Score = 143 bits (158), Expect = 3e-29
Identities = 295/434 (68%), Gaps = 6/434 (1%)
Strand=Plus/Plus
Query 14201 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 14260
||||| ||||| || || | || |||||||| | ||| | ||||||||| || ||
Sbjct 1143791 AAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTC 1143850
Query 14261 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 14320
|| ||||||||||| || || || ||||| || || ||||| || || || || ||
Sbjct 1143851 AAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAA 1143910
Query 14321 AATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-T 14379
|| | || || || ||||| ||||| | |||| ||| | | |||| | |
Sbjct 1143911 AACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCA 1143970
Query 14380 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14439
||| |||||| | | ||||||| || |||| ||| || || |||||||| ||
Sbjct 1143971 CGA-ATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGC 1144029
Query 14440 ATTAAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTA 14497
||| || || ||| | || |||| | |||| ||||| || ||||| | || |
Sbjct 1144030 ATTCAACAAGAATTCGTGTTCCTTAGGATCCTTG--ATGTAAGTGTCAATCAACAACGAA 1144087
Query 14498 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14557
|| |||| ||||| ||||||||||| || || ||||| || ||||| | ||||||
Sbjct 1144088 TAAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCT 1144147
Query 14558 GACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14617
| ||| ||||| | | || |||| |||| ||||| || || |||||||| |
Sbjct 1144148 GGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAA 1144207
Query 14618 GCTGCAAAAAATGC 14631
|| ||||| || ||
Sbjct 1144208 GCAGCAAAGAACGC 1144221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482344997068000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |