Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq88 232 6e-56
seq1 232 6e-56
seq83 105 6e-18
seq91 98.7 9e-16
>seq88
Length=341902
Score = 232 bits (256), Expect = 6e-56
Identities = 713/1087 (66%), Gaps = 22/1087 (2%)
Strand=Plus/Minus
Query 23097 ACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCA 23156
|||| || || ||||| || | || || || || || || | ||||||||| ||||
Sbjct 13883 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 13824
Query 23157 TGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGT 23216
|| | || || || || ||| || | || | ||| || ||||| | ||||| |
Sbjct 13823 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 13764
Query 23217 GAACACGTCGCACGTACCT--GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTC 23274
||| ||| | |||| ||||||| |||||| || |||||| || ||||||||
Sbjct 13763 TGACA-GTCTTTC-TACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 13706
Query 23275 GGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGA 23334
|||||||| || | | ||| || | || | ||| | | | | |||| |
Sbjct 13705 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 13646
Query 23335 GTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCG 23394
|| || || || | |||| |||||||| || |||||||| || ||||| || |
Sbjct 13645 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 13586
Query 23395 GGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGC 23454
|| || | || || || ||| ||||||| | | || | ||||| || | || |
Sbjct 13585 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 13526
Query 23455 ATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGAC 23514
||||| ||||||| ||| | ||| || || || |||||||| || || || || || ||
Sbjct 13525 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 13466
Query 23515 GTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCC 23574
||||||||| ||||||||| | || | | ||| || | | |||||| || | |||
Sbjct 13465 GTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 13406
Query 23575 TACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCC 23634
|| || | ||||| | | |||| |||||||| ||| ||||| || || ||
Sbjct 13405 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 13346
Query 23635 GCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTC 23694
| | || || ||||| || |||| |||| ||||||||| || || || ||| ||
Sbjct 13345 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 13286
Query 23695 CTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAA 23754
|| || | || || | |||||| || |||||||| | | || ||| | || |||
Sbjct 13285 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 13226
Query 23755 CAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGC 23814
||||| || ||||| || ||||||| |||||||| ||||| || || | |
Sbjct 13225 AAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 13166
Query 23815 GGCATCAATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTC 23873
||||| | |||| ||||| ||||||| || || | ||| ||||||| |||||| |
Sbjct 13165 CTTTTCAATAT-CTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGAC 13107
Query 23874 --TCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCC 23931
|| | | | | ||||| ||| | | || || ||||||| || || || || ||
Sbjct 13106 GTTCAGCAACCTTA--CCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACC 13049
Query 23932 AAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATT 23991
|| |||| | | || || | |||| || || || || |||||| ||| | ||
Sbjct 13048 GAAGTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAA--GTA-TCTTT 12992
Query 23992 GGCAGCGATGATGTTGTAATGAA---AATTCGATATCATCGGCGTTTTAACGCCGGTCTT 24048
| | |||| | ||| || | || ||| ||||| |||| | || || |||||
Sbjct 12991 GTTCTCCATGACGATGTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCTT 12932
Query 24049 TGGATCGATCGCTTCATACATATCGATAATGACAT-CGAAAAAAGAATCTTTAGTCTCCT 24107
||| | || | | |||| || | || | |||||| | || | || | ||
Sbjct 12931 TGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTC-GTGGTTTGCT 12873
Query 24108 TGTGCAAATTAGACACGGCCAATCTAGCCGC--AAGCAACGAATAGTCGGAATGATCGAT 24165
||||||| ||||| | ||| | |||||| || ||| | || || || | ||| | |
Sbjct 12872 TGTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCG--TAATCTGGGTGAATGGT 12815
Query 24166 GGTCATG 24172
|||||||
Sbjct 12814 GGTCATG 12808
>seq1
Length=4213555
Score = 232 bits (256), Expect = 6e-56
Identities = 713/1087 (66%), Gaps = 22/1087 (2%)
Strand=Plus/Plus
Query 23097 ACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCA 23156
|||| || || ||||| || | || || || || || || | ||||||||| ||||
Sbjct 3209798 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 3209857
Query 23157 TGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGT 23216
|| | || || || || ||| || | || | ||| || ||||| | ||||| |
Sbjct 3209858 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 3209917
Query 23217 GAACACGTCGCACGTACCT--GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTC 23274
||| ||| | |||| ||||||| |||||| || |||||| || ||||||||
Sbjct 3209918 TGACA-GTCTTTC-TACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 3209975
Query 23275 GGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGA 23334
|||||||| || | | ||| || | || | ||| | | | | |||| |
Sbjct 3209976 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 3210035
Query 23335 GTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCG 23394
|| || || || | |||| |||||||| || |||||||| || ||||| || |
Sbjct 3210036 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 3210095
Query 23395 GGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGC 23454
|| || | || || || ||| ||||||| | | || | ||||| || | || |
Sbjct 3210096 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 3210155
Query 23455 ATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGAC 23514
||||| ||||||| ||| | ||| || || || |||||||| || || || || || ||
Sbjct 3210156 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 3210215
Query 23515 GTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCC 23574
||||||||| ||||||||| | || | | ||| || | | |||||| || | |||
Sbjct 3210216 GTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 3210275
Query 23575 TACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCC 23634
|| || | ||||| | | |||| |||||||| ||| ||||| || || ||
Sbjct 3210276 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 3210335
Query 23635 GCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTC 23694
| | || || ||||| || |||| |||| ||||||||| || || || ||| ||
Sbjct 3210336 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 3210395
Query 23695 CTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAA 23754
|| || | || || | |||||| || |||||||| | | || ||| | || |||
Sbjct 3210396 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 3210455
Query 23755 CAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGC 23814
||||| || ||||| || ||||||| |||||||| ||||| || || | |
Sbjct 3210456 AAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 3210515
Query 23815 GGCATCAATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTC 23873
||||| | |||| ||||| ||||||| || || | ||| ||||||| |||||| |
Sbjct 3210516 CTTTTCAATAT-CTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGAC 3210574
Query 23874 --TCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCC 23931
|| | | | | ||||| ||| | | || || ||||||| || || || || ||
Sbjct 3210575 GTTCAGCAACCTTA--CCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACC 3210632
Query 23932 AAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATT 23991
|| |||| | | || || | |||| || || || || |||||| ||| | ||
Sbjct 3210633 GAAGTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAA--GTA-TCTTT 3210689
Query 23992 GGCAGCGATGATGTTGTAATGAA---AATTCGATATCATCGGCGTTTTAACGCCGGTCTT 24048
| | |||| | ||| || | || ||| ||||| |||| | || || |||||
Sbjct 3210690 GTTCTCCATGACGATGTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCTT 3210749
Query 24049 TGGATCGATCGCTTCATACATATCGATAATGACAT-CGAAAAAAGAATCTTTAGTCTCCT 24107
||| | || | | |||| || | || | |||||| | || | || | ||
Sbjct 3210750 TGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTC-GTGGTTTGCT 3210808
Query 24108 TGTGCAAATTAGACACGGCCAATCTAGCCGC--AAGCAACGAATAGTCGGAATGATCGAT 24165
||||||| ||||| | ||| | |||||| || ||| | || || || | ||| | |
Sbjct 3210809 TGTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCG--TAATCTGGGTGAATGGT 3210866
Query 24166 GGTCATG 24172
|||||||
Sbjct 3210867 GGTCATG 3210873
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/221 (68%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
|||||| ||||| |||| || || || ||||| | || || ||| | || |||| |
Sbjct 45262 TTTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCAT 45321
Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320
|| | ||||| | || ||||||||||| | || || ||||| || | |
Sbjct 45322 TGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATT 45381
Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| || ||||| || || ||||||||| || ||| || || || ||||| |||||
Sbjct 45382 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAA 45441
Query 31381 AGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || ||||| |||| | ||||| || || ||||
Sbjct 45442 GGAATCCACCCTTCACTTGGTCTTGAGACTAAGAGGTGGTA 45482
>seq83
Length=768430
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397
||||||||| ||| ||||||||||||||| ||||||||||| || || | || |||||
Sbjct 95966 ATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAAAATAAGTCTCGGGC 95907
Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457
| || || ||||| ||| |||||| | | | || ||||| | | ||| ||||
Sbjct 95906 CCTCATTTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATG 95847
Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517
||| || || | ||| | ||| || || || | || || || || |||||||| ||
Sbjct 95846 CCATGGTTCCAAGTATATACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATA 95787
Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565
| || |||||||| | || | ||||| || || | ||| || ||
Sbjct 95786 TCTTGCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTTGA 95739
>seq91
Length=167622
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||||||||| ||||| || || || || || || ||| | || || ||| | ||
Sbjct 23119 CATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTC 23178
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| | || | ||||| | || ||||||||||| | || || |||||
Sbjct 23179 CGACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCA 23238
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|| | | || || ||||| || || |||||||| || ||| || || || ||
Sbjct 23239 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAA 23298
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||| ||||| ||||| || ||||| |||| | ||| |||| || |||
Sbjct 23299 CATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGT 23347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765842792000
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