Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq88 232 6e-56 seq1 232 6e-56 seq83 105 6e-18 seq91 98.7 9e-16 >seq88 Length=341902 Score = 232 bits (256), Expect = 6e-56 Identities = 713/1087 (66%), Gaps = 22/1087 (2%) Strand=Plus/Minus Query 23097 ACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCA 23156 |||| || || ||||| || | || || || || || || | ||||||||| |||| Sbjct 13883 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 13824 Query 23157 TGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGT 23216 || | || || || || ||| || | || | ||| || ||||| | ||||| | Sbjct 13823 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 13764 Query 23217 GAACACGTCGCACGTACCT--GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTC 23274 ||| ||| | |||| ||||||| |||||| || |||||| || |||||||| Sbjct 13763 TGACA-GTCTTTC-TACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 13706 Query 23275 GGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGA 23334 |||||||| || | | ||| || | || | ||| | | | | |||| | Sbjct 13705 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 13646 Query 23335 GTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCG 23394 || || || || | |||| |||||||| || |||||||| || ||||| || | Sbjct 13645 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 13586 Query 23395 GGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGC 23454 || || | || || || ||| ||||||| | | || | ||||| || | || | Sbjct 13585 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 13526 Query 23455 ATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGAC 23514 ||||| ||||||| ||| | ||| || || || |||||||| || || || || || || Sbjct 13525 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 13466 Query 23515 GTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCC 23574 ||||||||| ||||||||| | || | | ||| || | | |||||| || | ||| Sbjct 13465 GTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 13406 Query 23575 TACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCC 23634 || || | ||||| | | |||| |||||||| ||| ||||| || || || Sbjct 13405 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 13346 Query 23635 GCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTC 23694 | | || || ||||| || |||| |||| ||||||||| || || || ||| || Sbjct 13345 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 13286 Query 23695 CTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAA 23754 || || | || || | |||||| || |||||||| | | || ||| | || ||| Sbjct 13285 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 13226 Query 23755 CAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGC 23814 ||||| || ||||| || ||||||| |||||||| ||||| || || | | Sbjct 13225 AAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 13166 Query 23815 GGCATCAATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTC 23873 ||||| | |||| ||||| ||||||| || || | ||| ||||||| |||||| | Sbjct 13165 CTTTTCAATAT-CTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGAC 13107 Query 23874 --TCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCC 23931 || | | | | ||||| ||| | | || || ||||||| || || || || || Sbjct 13106 GTTCAGCAACCTTA--CCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACC 13049 Query 23932 AAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATT 23991 || |||| | | || || | |||| || || || || |||||| ||| | || Sbjct 13048 GAAGTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAA--GTA-TCTTT 12992 Query 23992 GGCAGCGATGATGTTGTAATGAA---AATTCGATATCATCGGCGTTTTAACGCCGGTCTT 24048 | | |||| | ||| || | || ||| ||||| |||| | || || ||||| Sbjct 12991 GTTCTCCATGACGATGTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCTT 12932 Query 24049 TGGATCGATCGCTTCATACATATCGATAATGACAT-CGAAAAAAGAATCTTTAGTCTCCT 24107 ||| | || | | |||| || | || | |||||| | || | || | || Sbjct 12931 TGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTC-GTGGTTTGCT 12873 Query 24108 TGTGCAAATTAGACACGGCCAATCTAGCCGC--AAGCAACGAATAGTCGGAATGATCGAT 24165 ||||||| ||||| | ||| | |||||| || ||| | || || || | ||| | | Sbjct 12872 TGTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCG--TAATCTGGGTGAATGGT 12815 Query 24166 GGTCATG 24172 ||||||| Sbjct 12814 GGTCATG 12808 >seq1 Length=4213555 Score = 232 bits (256), Expect = 6e-56 Identities = 713/1087 (66%), Gaps = 22/1087 (2%) Strand=Plus/Plus Query 23097 ACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCA 23156 |||| || || ||||| || | || || || || || || | ||||||||| |||| Sbjct 3209798 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 3209857 Query 23157 TGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGT 23216 || | || || || || ||| || | || | ||| || ||||| | ||||| | Sbjct 3209858 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 3209917 Query 23217 GAACACGTCGCACGTACCT--GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTC 23274 ||| ||| | |||| ||||||| |||||| || |||||| || |||||||| Sbjct 3209918 TGACA-GTCTTTC-TACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 3209975 Query 23275 GGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGA 23334 |||||||| || | | ||| || | || | ||| | | | | |||| | Sbjct 3209976 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 3210035 Query 23335 GTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCG 23394 || || || || | |||| |||||||| || |||||||| || ||||| || | Sbjct 3210036 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 3210095 Query 23395 GGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGC 23454 || || | || || || ||| ||||||| | | || | ||||| || | || | Sbjct 3210096 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 3210155 Query 23455 ATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGAC 23514 ||||| ||||||| ||| | ||| || || || |||||||| || || || || || || Sbjct 3210156 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 3210215 Query 23515 GTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCC 23574 ||||||||| ||||||||| | || | | ||| || | | |||||| || | ||| Sbjct 3210216 GTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 3210275 Query 23575 TACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCC 23634 || || | ||||| | | |||| |||||||| ||| ||||| || || || Sbjct 3210276 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 3210335 Query 23635 GCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTC 23694 | | || || ||||| || |||| |||| ||||||||| || || || ||| || Sbjct 3210336 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 3210395 Query 23695 CTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAA 23754 || || | || || | |||||| || |||||||| | | || ||| | || ||| Sbjct 3210396 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 3210455 Query 23755 CAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGC 23814 ||||| || ||||| || ||||||| |||||||| ||||| || || | | Sbjct 3210456 AAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 3210515 Query 23815 GGCATCAATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTC 23873 ||||| | |||| ||||| ||||||| || || | ||| ||||||| |||||| | Sbjct 3210516 CTTTTCAATAT-CTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGAC 3210574 Query 23874 --TCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCC 23931 || | | | | ||||| ||| | | || || ||||||| || || || || || Sbjct 3210575 GTTCAGCAACCTTA--CCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACC 3210632 Query 23932 AAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATT 23991 || |||| | | || || | |||| || || || || |||||| ||| | || Sbjct 3210633 GAAGTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAA--GTA-TCTTT 3210689 Query 23992 GGCAGCGATGATGTTGTAATGAA---AATTCGATATCATCGGCGTTTTAACGCCGGTCTT 24048 | | |||| | ||| || | || ||| ||||| |||| | || || ||||| Sbjct 3210690 GTTCTCCATGACGATGTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCTT 3210749 Query 24049 TGGATCGATCGCTTCATACATATCGATAATGACAT-CGAAAAAAGAATCTTTAGTCTCCT 24107 ||| | || | | |||| || | || | |||||| | || | || | || Sbjct 3210750 TGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTC-GTGGTTTGCT 3210808 Query 24108 TGTGCAAATTAGACACGGCCAATCTAGCCGC--AAGCAACGAATAGTCGGAATGATCGAT 24165 ||||||| ||||| | ||| | |||||| || ||| | || || || | ||| | | Sbjct 3210809 TGTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCG--TAATCTGGGTGAATGGT 3210866 Query 24166 GGTCATG 24172 ||||||| Sbjct 3210867 GGTCATG 3210873 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| |||| || || || ||||| | || || ||| | || |||| | Sbjct 45262 TTTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCAT 45321 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 || | ||||| | || ||||||||||| | || || ||||| || | | Sbjct 45322 TGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATT 45381 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || || ||||| || || ||||||||| || ||| || || || ||||| ||||| Sbjct 45382 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAA 45441 Query 31381 AGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || ||||| |||| | ||||| || || |||| Sbjct 45442 GGAATCCACCCTTCACTTGGTCTTGAGACTAAGAGGTGGTA 45482 >seq83 Length=768430 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397 ||||||||| ||| ||||||||||||||| ||||||||||| || || | || ||||| Sbjct 95966 ATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAAAATAAGTCTCGGGC 95907 Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457 | || || ||||| ||| |||||| | | | || ||||| | | ||| |||| Sbjct 95906 CCTCATTTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATG 95847 Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517 ||| || || | ||| | ||| || || || | || || || || |||||||| || Sbjct 95846 CCATGGTTCCAAGTATATACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATA 95787 Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 | || |||||||| | || | ||||| || || | ||| || || Sbjct 95786 TCTTGCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTTGA 95739 >seq91 Length=167622 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||||||||| ||||| || || || || || || ||| | || || ||| | || Sbjct 23119 CATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTC 23178 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | || ||||||||||| | || || ||||| Sbjct 23179 CGACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCA 23238 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || | | || || ||||| || || |||||||| || ||| || || || || Sbjct 23239 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAA 23298 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||| ||||| ||||| || ||||| |||| | ||| |||| || ||| Sbjct 23299 CATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGT 23347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765842792000