Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1 111 2e-19 seq88 98.7 1e-15 >seq1 Length=4213555 Score = 111 bits (122), Expect = 2e-19 Identities = 319/485 (66%), Gaps = 17/485 (4%) Strand=Plus/Minus Query 52565 AAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGTC 52624 |||||| | | ||||| | | |||||| | ||| ||||| | || ||| | Sbjct 1144001 AAAAGGCTCAATGGGCCATTAGATGGATTCGTGATGACGAAGCCCTATACGCTGAAAGAT 1143942 Query 52625 TGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTTT 52684 |||| ||||| ||| ||||||||||||||||| || ||| ||||| || || || | Sbjct 1143941 TGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTTGCTGCCATCTTCT 1143882 Query 52685 ACATCAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCG 52744 | || | ||| | ||||| || | || || ||||| ||||| | | | Sbjct 1143881 GGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCAAACGAATTGATTTGCAGAG 1143822 Query 52745 ACGAAGGAATGCACACAGATTTTGCGTGTTTG-TATT--ATAATACGCGCGTTAAAGAAA 52801 | ||||| ||||||| || ||||| |||||| |||| || || || ||||| Sbjct 1143821 ATGAAGGTTTGCACACCGACTTTGCCTGTTTGCTATTCCATCAT-------TTGAAGAAC 1143769 Query 52802 AATTGTCATATGAAAAAATTCTAGA---CATGTTTAAAGAGGCCGTCGACATTGAAAA-A 52857 || | || || ||| ||| | || || | | ||| || || || || ||||| | Sbjct 1143768 AA--GCCAGATCCAAAGATTGTCGAAAGAATCATCACAGAAGCTGTTGAGATCGAAAAGA 1143711 Query 52858 GAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCATGAACGCGACCATGATGTGC 52917 || | || | |||||| ||||||| || | ||||| |||||||| ||||| | Sbjct 1143710 GA-TACTTCATCGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTGATGAAC 1143652 Query 52918 GAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGTCAGCCGAAATACTAT 52977 | ||| |||| |||||||| |||||||| || | | ||| | ||||||||| Sbjct 1143651 CAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTAGGTAACAAGAAATACTAC 1143592 Query 52978 AATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAGGGCAAAACAAACTTT 53037 || | |||||| || |||||| | ||||| || | | || ||||| || || Sbjct 1143591 AACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAAACCAATTTC 1143532 Query 53038 TTCGA 53042 ||||| Sbjct 1143531 TTCGA 1143527 Score = 98.7 bits (108), Expect = 1e-15 Identities = 576/900 (64%), Gaps = 29/900 (3%) Strand=Plus/Plus Query 153633 GCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATTGTACTATTTCC 153692 || || || |||||||| ||||| || ||||| || ||| | |||| || ||||| Sbjct 3209722 GCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCA 3209781 Query 153693 GCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTTT-GATTGCTTTTGCGGTTACA 153751 |||||| || | || || || | ||| | |||| |||| || || |||||| Sbjct 3209782 CAACACAAGTTCGAAGACTTGAT-AGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACA 3209840 Query 153752 AGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAATTTCTATAATA--GTA 153809 ||| ||||||||||||||| |||| || || ||||||| |||| ||| | ||| ||| Sbjct 3209841 AGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTA 3209900 Query 153810 CGCATCAA--TGTGACCGCGGGCATTTGATCGCGAAACTGGCCCTTGTCT-TCGTAGTGT 153866 | || ||| | ||| | | || | || | | | |||| ||| ||||| || Sbjct 3209901 C-CA-CAACTTTTGAGCCTTGACAGTCTTTC---TACCACGGCCTTCTCTCTCGTAACGT 3209955 Query 153867 TTGTACCAGTATTCAAACTCATCACC--AAACGTATTGTTAAGCTCGGGACATTCGTTGG 153924 | |||| | |||||| |||||||| |||| | || ||||| | || |||||| | Sbjct 3209956 TCGTACAATGCTTCAAATTCATCACCGTAAACAT-CTGGTAAGC-CTGGTGCTTCGTTTG 3210013 Query 153925 GACACATCAGTGACC-ATCGGCCATTTTCTTGAACGCGACGCATAAATATATCGGGAACC 153983 || | | || | || ||| | | |||| | || | ||| || | ||| || | | Sbjct 3210014 GAGAGAACAAAGTCCAATCTTCGTTCTTCTCG-ACTCTCTTCATGAAAAGATCTGGGATC 3210072 Query 153984 CATAGGGCGTTCATCAGGTCGCGCGCTTTCGTGTCTTCGCTGCCAATGTTTCGACGCATG 154043 ||||| || | || ||| | || | ||||| | || ||| | ||| Sbjct 3210073 CATAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATG 3210132 Query 154044 TGTAAGACGTCCATTATGTCGCAATGCCACGGTTCCACGTAAACTGCTTGAGCGCCTTTA 154103 | | || ||| | || || | ||||| || || | ||| | || || || Sbjct 3210133 TCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGT 3210192 Query 154104 CGCTTG---CCGCCCTGATTTACGTGACGCACCATATTGTTGAAAACCCGAAGCATGGGT 154160 | |||| || || || | |||| ||| | | ||||||||||| |||| ||| || Sbjct 3210193 CTCTTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGA 3210252 Query 154161 AGCAGACCGCTGGCGGTACCGTTTGTAGATTTAATCTTGCTGTTGCGG--CCTCGAACGC 154218 | | |||| | | |||||||| ||| ||| | | ||| |||| | Sbjct 3210253 ATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGT--AAGAACCGGTAGAACGAATGT 3210310 Query 154219 TGTTTACGTTTAATCCAATACCGCCGCCGTGTTTGGAGATCATGGCGCAATCGTTCAATG 154278 ||| | || || |||||||| || || || ||||||||||| || || ||||| | Sbjct 3210311 TGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAG 3210370 Query 154279 TGTTATAGATACCACGAATGCTATCGCTTTCCATGGTCAATAGGAAACATGAACTCATCT 154338 ||| || ||||| |||| ||| | ||||| || |||||||||||| ||| | Sbjct 3210371 TGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTT 3210430 Query 154339 GCGGAGTTGGAGTGCCGGCAGCAAACATGGTCGGGCTTGCGTGCGTGTA-CATCTTTGTG 154397 | ||| ||||| || ||| || | || || ||||| ||| | ||||| | | Sbjct 3210431 GTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAG 3210490 Query 154398 CTCAAAAATTTATAAGACTTTATGGCATTATCAATGTCGTCT-CCAAAGATACCTAGAGC 154456 || | || |||| | | | || ||||| || ||| || |||||| | ||| Sbjct 3210491 -ACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATC-TCTACCGTGGATACCGACAGC 3210548 Query 154457 TATACGCATGTGCATGTGTTGAATCCTTTCGGCAACTTTTTCGTTAATTTTTATCAGGTA 154516 | | |||| |||||||||| | ||| ||||| || |||| ||| ||| || ||| Sbjct 3210549 CACTCTCATGATCATGTGTTGAGGACGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTA 3210608 >seq88 Length=341902 Score = 98.7 bits (108), Expect = 1e-15 Identities = 576/900 (64%), Gaps = 29/900 (3%) Strand=Plus/Minus Query 153633 GCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATTGTACTATTTCC 153692 || || || |||||||| ||||| || ||||| || ||| | |||| || ||||| Sbjct 13959 GCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCA 13900 Query 153693 GCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTTT-GATTGCTTTTGCGGTTACA 153751 |||||| || | || || || | ||| | |||| |||| || || |||||| Sbjct 13899 CAACACAAGTTCGAAGACTTGAT-AGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACA 13841 Query 153752 AGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAATTTCTATAATA--GTA 153809 ||| ||||||||||||||| |||| || || ||||||| |||| ||| | ||| ||| Sbjct 13840 AGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTA 13781 Query 153810 CGCATCAA--TGTGACCGCGGGCATTTGATCGCGAAACTGGCCCTTGTCT-TCGTAGTGT 153866 | || ||| | ||| | | || | || | | | |||| ||| ||||| || Sbjct 13780 C-CA-CAACTTTTGAGCCTTGACAGTCTTTC---TACCACGGCCTTCTCTCTCGTAACGT 13726 Query 153867 TTGTACCAGTATTCAAACTCATCACC--AAACGTATTGTTAAGCTCGGGACATTCGTTGG 153924 | |||| | |||||| |||||||| |||| | || ||||| | || |||||| | Sbjct 13725 TCGTACAATGCTTCAAATTCATCACCGTAAACAT-CTGGTAAGC-CTGGTGCTTCGTTTG 13668 Query 153925 GACACATCAGTGACC-ATCGGCCATTTTCTTGAACGCGACGCATAAATATATCGGGAACC 153983 || | | || | || ||| | | |||| | || | ||| || | ||| || | | Sbjct 13667 GAGAGAACAAAGTCCAATCTTCGTTCTTCTCG-ACTCTCTTCATGAAAAGATCTGGGATC 13609 Query 153984 CATAGGGCGTTCATCAGGTCGCGCGCTTTCGTGTCTTCGCTGCCAATGTTTCGACGCATG 154043 ||||| || | || ||| | || | ||||| | || ||| | ||| Sbjct 13608 CATAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATG 13549 Query 154044 TGTAAGACGTCCATTATGTCGCAATGCCACGGTTCCACGTAAACTGCTTGAGCGCCTTTA 154103 | | || ||| | || || | ||||| || || | ||| | || || || Sbjct 13548 TCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGT 13489 Query 154104 CGCTTG---CCGCCCTGATTTACGTGACGCACCATATTGTTGAAAACCCGAAGCATGGGT 154160 | |||| || || || | |||| ||| | | ||||||||||| |||| ||| || Sbjct 13488 CTCTTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGA 13429 Query 154161 AGCAGACCGCTGGCGGTACCGTTTGTAGATTTAATCTTGCTGTTGCGG--CCTCGAACGC 154218 | | |||| | | |||||||| ||| ||| | | ||| |||| | Sbjct 13428 ATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGT--AAGAACCGGTAGAACGAATGT 13371 Query 154219 TGTTTACGTTTAATCCAATACCGCCGCCGTGTTTGGAGATCATGGCGCAATCGTTCAATG 154278 ||| | || || |||||||| || || || ||||||||||| || || ||||| | Sbjct 13370 TGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAG 13311 Query 154279 TGTTATAGATACCACGAATGCTATCGCTTTCCATGGTCAATAGGAAACATGAACTCATCT 154338 ||| || ||||| |||| ||| | ||||| || |||||||||||| ||| | Sbjct 13310 TGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTT 13251 Query 154339 GCGGAGTTGGAGTGCCGGCAGCAAACATGGTCGGGCTTGCGTGCGTGTA-CATCTTTGTG 154397 | ||| ||||| || ||| || | || || ||||| ||| | ||||| | | Sbjct 13250 GTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAG 13191 Query 154398 CTCAAAAATTTATAAGACTTTATGGCATTATCAATGTCGTCT-CCAAAGATACCTAGAGC 154456 || | || |||| | | | || ||||| || ||| || |||||| | ||| Sbjct 13190 -ACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATC-TCTACCGTGGATACCGACAGC 13133 Query 154457 TATACGCATGTGCATGTGTTGAATCCTTTCGGCAACTTTTTCGTTAATTTTTATCAGGTA 154516 | | |||| |||||||||| | ||| ||||| || |||| ||| ||| || ||| Sbjct 13132 CACTCTCATGATCATGTGTTGAGGACGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTA 13073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063379920000