Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq1 156 4e-33
>seq1
Length=4213555
Score = 156 bits (172), Expect = 4e-33
Identities = 466/710 (66%), Gaps = 12/710 (2%)
Strand=Plus/Plus
Query 13596 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13655
||||| ||||| ||||| || |||||||| ||| || || ||||||||||| || |||
Sbjct 1143518 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 1143577
Query 13656 GGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAAT 13714
|| || | |||| | | ||| | ||||| | | |||| ||| || ||||
Sbjct 1143578 GGGTT-AGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAAC 1143636
Query 13715 AAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTAT 13774
||| || | ||||| ||| |||||| |||||||| | ||| || || |
Sbjct 1143637 AAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGC 1143696
Query 13775 ATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCTC 13834
| | | || || ||||| || ||||| ||| | || || || | |||||
Sbjct 1143697 GTCGATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAATCT- 1143755
Query 13835 ATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGG 13892
|| || | | || | | ||| | || | ||||| ||||| || || |
Sbjct 1143756 -TTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAAA 1143814
Query 13893 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13952
|| |||||||| | ||| | ||||||||| || || || ||||||||||| || ||
Sbjct 1143815 CCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTTC 1143874
Query 13953 tttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 14012
|| ||||| || || |||||||| || || || || || | || || || ||||| |||
Sbjct 1143875 TTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAAC 1143934
Query 14013 GCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCATTTTCTAGCCCATTC 14071
|| | |||| ||| | | |||| | | ||| |||||| | | |||||||
Sbjct 1143935 GCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGA-ATCCATCTAATGGCCCATTG 1143993
Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTT 14131
|| |||| ||| || || |||||||| ||||| || || |||| | || ||
Sbjct 1143994 AGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAATTCGTGTTCCTT 1144053
Query 14132 AG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCC 14189
|| | |||| ||||| || ||||| | || ||| |||| ||||| |||||||||
Sbjct 1144054 AGGATCCTTG--ATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTGGATGTTTTCC 1144111
Query 14190 ATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAAT 14249
|| || || ||||| || || || | ||||| | ||| || || | | ||
Sbjct 1144112 ATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAGAAG 1144171
Query 14250 CTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGC 14299
|||| |||| ||||| || || |||||||| ||| ||||| || ||
Sbjct 1144172 TTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGC 1144221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727400340000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |