Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1 156 4e-33 >seq1 Length=4213555 Score = 156 bits (172), Expect = 4e-33 Identities = 466/710 (66%), Gaps = 12/710 (2%) Strand=Plus/Plus Query 13596 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13655 ||||| ||||| ||||| || |||||||| ||| || || ||||||||||| || ||| Sbjct 1143518 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 1143577 Query 13656 GGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAAT 13714 || || | |||| | | ||| | ||||| | | |||| ||| || |||| Sbjct 1143578 GGGTT-AGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAAC 1143636 Query 13715 AAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTAT 13774 ||| || | ||||| ||| |||||| |||||||| | ||| || || | Sbjct 1143637 AAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGC 1143696 Query 13775 ATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCTC 13834 | | | || || ||||| || ||||| ||| | || || || | ||||| Sbjct 1143697 GTCGATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAATCT- 1143755 Query 13835 ATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGG 13892 || || | | || | | ||| | || | ||||| ||||| || || | Sbjct 1143756 -TTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAAA 1143814 Query 13893 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13952 || |||||||| | ||| | ||||||||| || || || ||||||||||| || || Sbjct 1143815 CCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTTC 1143874 Query 13953 tttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 14012 || ||||| || || |||||||| || || || || || | || || || ||||| ||| Sbjct 1143875 TTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAAC 1143934 Query 14013 GCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCATTTTCTAGCCCATTC 14071 || | |||| ||| | | |||| | | ||| |||||| | | ||||||| Sbjct 1143935 GCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGA-ATCCATCTAATGGCCCATTG 1143993 Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTT 14131 || |||| ||| || || |||||||| ||||| || || |||| | || || Sbjct 1143994 AGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAATTCGTGTTCCTT 1144053 Query 14132 AG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCC 14189 || | |||| ||||| || ||||| | || ||| |||| ||||| ||||||||| Sbjct 1144054 AGGATCCTTG--ATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTGGATGTTTTCC 1144111 Query 14190 ATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAAT 14249 || || || ||||| || || || | ||||| | ||| || || | | || Sbjct 1144112 ATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAGAAG 1144171 Query 14250 CTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGC 14299 |||| |||| ||||| || || |||||||| ||| ||||| || || Sbjct 1144172 TTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGC 1144221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727400340000