Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1 123 3e-23 >seq1 Length=4213555 Score = 123 bits (136), Expect = 3e-23 Identities = 297/436 (68%), Gaps = 15/436 (3%) Strand=Plus/Minus Query 50410 GCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCA 50469 || ||| | || || ||||| || || |||||||||||||| || ||| |||||| Sbjct 1143951 GCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTTGCT 1143892 Query 50470 GCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTG 50529 ||||| || | | || | || | ||||| || | || || ||||| ||| Sbjct 1143891 GCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCAAACGAATTG 1143832 Query 50530 ATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGCGTA 50589 |||| | || ||||| ||||||| |||||||| |||||| | | || | | Sbjct 1143831 ATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTGTTTGCTATTCCAT---CATTTG 1143775 Query 50590 AATGAAAAATTATCATACGAAACAATTTTGGAC--ATGTTCAAAGAAGCCGTCGACATCG 50647 || ||| || || | ||| | | | | | || ||| |||||| || || |||| Sbjct 1143774 AA-GAACAAGCCAGATCC-AAAGATTGTCGAAAGAATCATCACAGAAGCTGTTGAGATCG 1143717 Query 50648 AAAAAGAGTTT-TTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATG 50706 |||| ||| | |||| |||||| ||||||| | | ||||| |||||||| || || Sbjct 1143716 AAAA-GAGATACTTCATCGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTG 1143658 Query 50707 ATGTGCGAGTACATTGAGTTTGTTGCAGACAGA-TTGTTGTTGCAGCTGG-GACAACCGA 50764 ||| | | ||| | || ||||||||||||||| | | ||||| || |||| || Sbjct 1143657 ATGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTAGGTAACAA--GA 1143600 Query 50765 AATACTATAATG-CACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAA 50823 ||||||| || | ||| |||||| || |||||| | ||||| || |||| || ||| Sbjct 1143599 AATACTACAACGTCAC-TAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAA 1143541 Query 50824 ACAAACTTTTTCGAAA 50839 || || || ||||||| Sbjct 1143540 ACCAATTTCTTCGAAA 1143525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013766232000