Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq91 140 2e-28
seq1 129 4e-25
>seq91
Length=167622
Score = 140 bits (154), Expect = 2e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || || || |||||||| || || ||||| |||||||| ||
Sbjct 23346 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 23287
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | |||| | ||||| ||||| || ||||| | ||||| | ||||||||| |||
Sbjct 23286 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 23227
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| || || ||| ||| | || ||||| ||| | ||| ||
Sbjct 23226 ATACCTTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACT 23167
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| |||||||| || ||||| || || || || || |||||||||||
Sbjct 23166 TCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 23120
>seq1
Length=4213555
Score = 129 bits (142), Expect = 4e-25
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| | ||| || || || ||||||||||| || ||||| |||||||| ||
Sbjct 45480 CCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 45421
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | |||| ||||||| ||||| || ||||| | ||||| | ||||||||| ||||
Sbjct 45420 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 45361
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| ||| ||| ||| ||| | || ||||| || | ||| ||
Sbjct 45360 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACT 45301
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15355
|| || || ||||| ||||| |||| || || || |||
Sbjct 45300 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAAA 45262
Score = 100 bits (110), Expect = 2e-16
Identities = 99/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|| |||||||| || || || || || || ||||| || ||||| |||||||| ||| |
Sbjct 1810893 CCTCCTCTCAACCTCAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGAT 1810952
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| |||| ||||||||||||| || ||||| | ||||| | ||||||||| |||
Sbjct 1810953 AGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 1811012
Query 15257 ATTCCTTC 15264
|| |||||
Sbjct 1811013 ATACCTTC 1811020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362178758594100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |