Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq1 181 9e-41 >seq1 Length=4213555 Score = 181 bits (200), Expect = 9e-41 Identities = 548/835 (66%), Gaps = 31/835 (4%) Strand=Plus/Plus Query 12875 ACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAA 12934 ||||| ||||| || || || ||||| || | || ||||| ||||||||||| ||||| Sbjct 1143518 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 1143577 Query 12935 GGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACA 12994 || || | |||||||| || ||||| | | | | |||||| |||||| Sbjct 1143578 GGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAACA 1143637 Query 12995 AACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAGCT 13054 || || | ||| || ||||| |||||| |||||| || | || || || | ||| Sbjct 1143638 AATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGCG 1143697 Query 13055 TCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTACGTTC 13114 || | || | | ||||| || ||||| ||||| | | || |||| || || Sbjct 1143698 TCGATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGAT---TCTTTCGACAATC 1143754 Query 13115 TCTAATGGAG--GATTTGAT----AGATGCTTAAACATCATACATGCAAAATCACAGTGC 13168 | | ||| | ||| | | ||| | || | || ||| ||||| || |||| Sbjct 1143755 TTT---GGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAAGTCGGTGTGC 1143811 Query 13169 AATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCAT-AAGCCCTCG 13227 || ||||||||||| | || | |||||||| || || | ||| ||||| || |||| Sbjct 1143812 AAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATCAAACCCTTC 1143871 Query 13228 TTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGC 13287 || || || ||| || || |||||||| ||||| || ||||| | ||||| || || || Sbjct 1143872 TTCTTCAA-CCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTTCCACGGCAGC 1143930 Query 13288 AAACGCTATCAACCTTTCACCATACGTA-CTATTTTTACTCTC-TATCCACTTTCTGGCC 13345 ||||| | ||| |||||| | || || || | || | ||||| | ||||| Sbjct 1143931 GAACGCAACCAATCTTTCAGCGTA--TAGGGCTTCGTCATCACGAATCCATCTAATGGCC 1143988 Query 13346 CAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAATAAtttttt 13405 || | || |||| ||| | || |||| || || || || || | | | | Sbjct 1143989 CATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAATTCGTGT 1144048 Query 13406 tCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTT 13465 |||||| || || ||||| || ||||| || ||| |||| || || || ||| Sbjct 1144049 TCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTGGATGTTT 1144108 Query 13466 TCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAA 13525 |||||| ||||||||||| || ||||| | || |||| | || || || | | Sbjct 1144109 TCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAG 1144168 Query 13526 AATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAG---T 13582 || |||| | ||||||||||| || || || || ||||||||| || ||||| | Sbjct 1144169 AAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACT 1144228 Query 13583 ATGTGCTTAATAAAt---tttttttCGTT--TTCTGACAACTTTAACCAATCTGGAAAAT 13637 || | | |||| | || ||||| ||||| || ||| || ||| || Sbjct 1144229 CTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTG-----TTGTTCCAGTCATGAAGAT 1144283 Query 13638 CTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATA 13692 | || || ||||| | || ||| | ||||||||||| || | || ||||||| Sbjct 1144284 CCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATA 1144338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430981874740200