Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq1 181 9e-41
>seq1
Length=4213555
Score = 181 bits (200), Expect = 9e-41
Identities = 548/835 (66%), Gaps = 31/835 (4%)
Strand=Plus/Plus
Query 12875 ACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAA 12934
||||| ||||| || || || ||||| || | || ||||| ||||||||||| |||||
Sbjct 1143518 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 1143577
Query 12935 GGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACA 12994
|| || | |||||||| || ||||| | | | | |||||| ||||||
Sbjct 1143578 GGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAACA 1143637
Query 12995 AACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAGCT 13054
|| || | ||| || ||||| |||||| |||||| || | || || || | |||
Sbjct 1143638 AATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGCG 1143697
Query 13055 TCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTACGTTC 13114
|| | || | | ||||| || ||||| ||||| | | || |||| || ||
Sbjct 1143698 TCGATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGAT---TCTTTCGACAATC 1143754
Query 13115 TCTAATGGAG--GATTTGAT----AGATGCTTAAACATCATACATGCAAAATCACAGTGC 13168
| | ||| | ||| | | ||| | || | || ||| ||||| || ||||
Sbjct 1143755 TTT---GGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAAGTCGGTGTGC 1143811
Query 13169 AATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCAT-AAGCCCTCG 13227
|| ||||||||||| | || | |||||||| || || | ||| ||||| || ||||
Sbjct 1143812 AAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATCAAACCCTTC 1143871
Query 13228 TTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGC 13287
|| || || ||| || || |||||||| ||||| || ||||| | ||||| || || ||
Sbjct 1143872 TTCTTCAA-CCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTTCCACGGCAGC 1143930
Query 13288 AAACGCTATCAACCTTTCACCATACGTA-CTATTTTTACTCTC-TATCCACTTTCTGGCC 13345
||||| | ||| |||||| | || || || | || | ||||| | |||||
Sbjct 1143931 GAACGCAACCAATCTTTCAGCGTA--TAGGGCTTCGTCATCACGAATCCATCTAATGGCC 1143988
Query 13346 CAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAATAAtttttt 13405
|| | || |||| ||| | || |||| || || || || || | | | |
Sbjct 1143989 CATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAATTCGTGT 1144048
Query 13406 tCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTT 13465
|||||| || || ||||| || ||||| || ||| |||| || || || |||
Sbjct 1144049 TCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTGGATGTTT 1144108
Query 13466 TCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAA 13525
|||||| ||||||||||| || ||||| | || |||| | || || || | |
Sbjct 1144109 TCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAG 1144168
Query 13526 AATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAG---T 13582
|| |||| | ||||||||||| || || || || ||||||||| || ||||| |
Sbjct 1144169 AAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACT 1144228
Query 13583 ATGTGCTTAATAAAt---tttttttCGTT--TTCTGACAACTTTAACCAATCTGGAAAAT 13637
|| | | |||| | || ||||| ||||| || ||| || ||| ||
Sbjct 1144229 CTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTG-----TTGTTCCAGTCATGAAGAT 1144283
Query 13638 CTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATA 13692
| || || ||||| | || ||| | ||||||||||| || | || |||||||
Sbjct 1144284 CCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATA 1144338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430981874740200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |