Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1 176 1e-38
seq91 140 7e-28
>seq1
Length=4213555
Score = 176 bits (194), Expect = 1e-38
Identities = 371/546 (68%), Gaps = 8/546 (1%)
Strand=Plus/Minus
Query 268754 GCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGA-CTTAATAGATTG 268812
|||| || ||||||||||||| |||||| | ||| |||| | || ||| || || ||
Sbjct 1144329 GCCGAGGCCTCTTTTTGGACTGCTGAAGAAATCGATTTGTCCAAGGATCTTCAT-GACTG 1144271
Query 268813 GAAAAATTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGC 268869
||| || || ||| |||| || ||| || || || | |||||||| |||||
Sbjct 1144270 GAACAACAGAATGAACGAGAACGAGAGATTTTTCATCTCCAGAGTGCTTGCGTTCTTTGC 1144211
Query 268870 AGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGAT 268929
| | ||||||||||| |||||||| | || || || |||| | ||||| || ||
Sbjct 1144210 TGCTTCCGATGGTATCGTGAACGAAAACTTGGTGGAAAACTTCTCTGCTGAGGTGCAAAT 1144151
Query 268930 TCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGAT 268989
||| ||||||| ||||| ||||| ||||| || || ||||| || || || || |
Sbjct 1144150 TCCAGAAGCCAAGTGTTTCTACGGTTTCCAAATTATGATGGAAAACATCCACTCCGAAAC 1144091
Query 268990 GTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTC 269049
|| | || || || ||||| || | ||| || ||| | || | ||
Sbjct 1144090 TTATTCGTTGTTGATTGACACTTACATCAAGGATCCTAAGGAACACGAATTCTTGTTGAA 1144031
Query 269050 TTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAA 269109
| | || ||| || | | | |||| || ||||||| | | ||||||
Sbjct 1144030 TGCCATTGAAACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGATGGATTCG 1143971
Query 269110 CGATAGCGCG--CCT-TACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATT 269166
||| || ||| |||| ||||| || ||||| || || || || |||||| | ||
Sbjct 1143970 TGATGACGAAGCCCTATACGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTT 1143911
Query 269167 CTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATT 269226
|| || || || ||||| || ||||| ||||||||||| | || | |||||||| ||
Sbjct 1143910 TTTCTCTGGTTCCTTTGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTT 1143851
Query 269227 AACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTT 269286
|| ||||| ||||||||||| |||| || |||||||| ||| |||||| || |||||
Sbjct 1143850 GACCTTCTCAAACGAATTGATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTGTTT 1143791
Query 269287 ATTATT 269292
||||
Sbjct 1143790 GCTATT 1143785
Score = 120 bits (132), Expect = 7e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||||||| || | || | || | || ||||| || || || || ||||||
Sbjct 45483 ATACCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCA 45424
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | ||||||||||||||| | ||| || |||||||| || | || ||||| || ||
Sbjct 45423 GACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGT 45364
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||| | || ||||| || | ||| || || |||
Sbjct 45363 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCG 45304
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535
|| || | || || |||||||||||
Sbjct 45303 ACTTCCAAAGTGATGGTCTTACCAGT 45278
Score = 96.9 bits (106), Expect = 8e-15
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||| | ||| | || | || | ||| ||||| || || || || ||||| |||
Sbjct 1810893 CCTCCTCTCAACCTCAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGAT 1810952
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
|||||||| |||||||||| ||| || ||||||||||| | || ||||| || |||||
Sbjct 1810953 AGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 1811012
Query 104453 ATTCCTTC 104460
|| |||||
Sbjct 1811013 ATACCTTC 1811020
>seq91
Length=167622
Score = 140 bits (154), Expect = 7e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| || || || || |||||||| | ||||||||| ||||| | ||| || |||
Sbjct 23316 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCA 23257
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | || ||||| || ||||| || ||||| || || || ||||| | ||
Sbjct 23256 GCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTTAGACTTG 23197
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||| || ||| || || | ||||||||||||||||| || ||
Sbjct 23196 ACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGTCTTACCAGTTAGGGTC 23137
Query 104543 TTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 23136 TTGACGAAAATTTGCAT 23120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151396924770800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |