Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 8e-24
>seq1
Length=4213555
Score = 125 bits (138), Expect = 8e-24
Identities = 346/531 (65%), Gaps = 9/531 (2%)
Strand=Plus/Plus
Query 21472 CAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGT 21531
|||||| ||||| || |||||||||||||| || | || ||||| || || || ||
Sbjct 1143790 CAAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGT 1143849
Query 21532 TAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAA 21591
||||| ||||| || || |||| || ||||| || || | ||||| | || || ||
Sbjct 1143850 CAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAA 1143909
Query 21592 GAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATC 21651
|| | || || |||||||| || ||||| |||| |||| ||||| | ||| | |||
Sbjct 1143910 AAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATC 1143969
Query 21652 CAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGC 21711
|||||| | ||||||| ||||||||||| || ||| || ||||| ||
Sbjct 1143970 ACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGC 1144029
Query 21712 TTTTAA-AAGATGAtt-tttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTA 21769
|| || |||| ||| | ||| | ||| | ||| |
Sbjct 1144030 ATTCAACAAGA--ATTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAA 1144087
Query 21770 TACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCT 21829
|| |||| || || || ||||| ||| || || || ||||| ||||| | || |||
Sbjct 1144088 TAAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCT 1144147
Query 21830 GAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTG 21889
| | ||| ||||| | | | || || |||||||||| || || || |||||
Sbjct 1144148 GGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAA 1144207
Query 21890 GCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT----TT 21945
|| ||||| || || | | | || ||| ||| ||||| || ||| || ||
Sbjct 1144208 GCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTC-GTTCATTCTGTT 1144266
Query 21946 TTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996
||||| || | ||| || || ||||| | |||||||| ||||||||
Sbjct 1144267 GTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAA 1144317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900135124000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |