Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1 125 8e-24 >seq1 Length=4213555 Score = 125 bits (138), Expect = 8e-24 Identities = 346/531 (65%), Gaps = 9/531 (2%) Strand=Plus/Plus Query 21472 CAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGT 21531 |||||| ||||| || |||||||||||||| || | || ||||| || || || || Sbjct 1143790 CAAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGT 1143849 Query 21532 TAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAA 21591 ||||| ||||| || || |||| || ||||| || || | ||||| | || || || Sbjct 1143850 CAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAA 1143909 Query 21592 GAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATC 21651 || | || || |||||||| || ||||| |||| |||| ||||| | ||| | ||| Sbjct 1143910 AAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATC 1143969 Query 21652 CAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGC 21711 |||||| | ||||||| ||||||||||| || ||| || ||||| || Sbjct 1143970 ACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGC 1144029 Query 21712 TTTTAA-AAGATGAtt-tttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTA 21769 || || |||| ||| | ||| | ||| | ||| | Sbjct 1144030 ATTCAACAAGA--ATTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAA 1144087 Query 21770 TACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCT 21829 || |||| || || || ||||| ||| || || || ||||| ||||| | || ||| Sbjct 1144088 TAAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCT 1144147 Query 21830 GAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTG 21889 | | ||| ||||| | | | || || |||||||||| || || || ||||| Sbjct 1144148 GGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAA 1144207 Query 21890 GCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT----TT 21945 || ||||| || || | | | || ||| ||| ||||| || ||| || || Sbjct 1144208 GCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTC-GTTCATTCTGTT 1144266 Query 21946 TTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996 ||||| || | ||| || || ||||| | |||||||| |||||||| Sbjct 1144267 GTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAA 1144317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900135124000