Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq88 284 2e-71
seq1 284 2e-71
seq83 147 3e-30
>seq88
Length=341902
Score = 284 bits (314), Expect = 2e-71
Identities = 751/1142 (66%), Gaps = 20/1142 (2%)
Strand=Plus/Minus
Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027
|||||||||| || || || | |||||||||||| |||||||| |||||||| || || |
Sbjct 13883 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 13824
Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63087
||||||| ||||||||||| | |||| ||| | || || | ||| | | ||||||
Sbjct 13823 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 13764
Query 63088 TTATTATAGATTTGTATCTC--CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 63145
| | | ||| || | | | |||||| ||||| || |||||| ||| || ||
Sbjct 13763 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 13706
Query 63146 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 63205
|| || |||||| || || || ||| | ||| | | ||| | ||| ||| |
Sbjct 13705 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 13646
Query 63206 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63265
|| | || |||| ||||| || ||||| || ||||| || ||| || | |||||
Sbjct 13645 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 13586
Query 63266 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63325
| | ||| || || || |||||| | | |||| ||| | | ||||| ||
Sbjct 13585 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 13526
Query 63326 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63385
||||| || || | ||| | ||| | | ||||| | ||||| || || || || |
Sbjct 13525 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 13466
Query 63386 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63445
||| | || ||||| || |||| | | |||||||||||||||||| || |||| ||
Sbjct 13465 GTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 13406
Query 63446 GGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCC 63505
||||| | || || || | | |||||| || ||| | ||| || || ||
Sbjct 13405 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 13346
Query 63506 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATC 63565
|| | |||||||| | || ||| || || ||||| || ||||| || ||| |||
Sbjct 13345 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 13286
Query 63566 ATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 63625
|| ||||| | ||| ||||| |||||||| || || ||| || ||||| ||
Sbjct 13285 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 13226
Query 63626 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63685
| ||||| |||||||| || || || || ||| | ||| ||||| || || | | |
Sbjct 13225 AAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 13166
Query 63686 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63745
|| ||||| | || || || || || || | ||| | |||||| ||||| |
Sbjct 13165 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 13106
Query 63746 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63805
|||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| ||
Sbjct 13105 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 13046
Query 63806 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 63865
|||||| || || |||| ||||| | ||| | ||||| | |||| |||
Sbjct 13045 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATC------TTT 12992
Query 63866 GTTAACTATATCCATGGTGATAC-------TTGAAATAATCGGAGAATGTTTCCCATTTT 63918
||| | || | || || |||| ||||| || || || || | ||| | |
Sbjct 12991 GTTCTCCATGACGAT-GTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCT 12933
Query 63919 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCT 63978
| || || || | || | || || || | ||||| ||| | || | |||| ||
Sbjct 12932 TTGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCT 12873
Query 63979 TGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAG 64038
|||| | || || | ||| ||||| ||||| | | | || ||||| || || || |
Sbjct 12872 TGTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGG 12813
Query 64039 TACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 64097
| || || ||| | |||| || |||| | || ||||| || || ||||| || | |
Sbjct 12812 T-CATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCA 12754
Query 64098 TA 64099
||
Sbjct 12753 TA 12752
>seq1
Length=4213555
Score = 284 bits (314), Expect = 2e-71
Identities = 751/1142 (66%), Gaps = 20/1142 (2%)
Strand=Plus/Plus
Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027
|||||||||| || || || | |||||||||||| |||||||| |||||||| || || |
Sbjct 3209798 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 3209857
Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63087
||||||| ||||||||||| | |||| ||| | || || | ||| | | ||||||
Sbjct 3209858 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 3209917
Query 63088 TTATTATAGATTTGTATCTC--CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 63145
| | | ||| || | | | |||||| ||||| || |||||| ||| || ||
Sbjct 3209918 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 3209975
Query 63146 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 63205
|| || |||||| || || || ||| | ||| | | ||| | ||| ||| |
Sbjct 3209976 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 3210035
Query 63206 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63265
|| | || |||| ||||| || ||||| || ||||| || ||| || | |||||
Sbjct 3210036 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 3210095
Query 63266 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63325
| | ||| || || || |||||| | | |||| ||| | | ||||| ||
Sbjct 3210096 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 3210155
Query 63326 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63385
||||| || || | ||| | ||| | | ||||| | ||||| || || || || |
Sbjct 3210156 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 3210215
Query 63386 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63445
||| | || ||||| || |||| | | |||||||||||||||||| || |||| ||
Sbjct 3210216 GTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 3210275
Query 63446 GGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCC 63505
||||| | || || || | | |||||| || ||| | ||| || || ||
Sbjct 3210276 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 3210335
Query 63506 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATC 63565
|| | |||||||| | || ||| || || ||||| || ||||| || ||| |||
Sbjct 3210336 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 3210395
Query 63566 ATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 63625
|| ||||| | ||| ||||| |||||||| || || ||| || ||||| ||
Sbjct 3210396 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 3210455
Query 63626 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63685
| ||||| |||||||| || || || || ||| | ||| ||||| || || | | |
Sbjct 3210456 AAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 3210515
Query 63686 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63745
|| ||||| | || || || || || || | ||| | |||||| ||||| |
Sbjct 3210516 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 3210575
Query 63746 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63805
|||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| ||
Sbjct 3210576 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 3210635
Query 63806 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 63865
|||||| || || |||| ||||| | ||| | ||||| | |||| |||
Sbjct 3210636 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATC------TTT 3210689
Query 63866 GTTAACTATATCCATGGTGATAC-------TTGAAATAATCGGAGAATGTTTCCCATTTT 63918
||| | || | || || |||| ||||| || || || || | ||| | |
Sbjct 3210690 GTTCTCCATGACGAT-GTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCT 3210748
Query 63919 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCT 63978
| || || || | || | || || || | ||||| ||| | || | |||| ||
Sbjct 3210749 TTGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCT 3210808
Query 63979 TGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAG 64038
|||| | || || | ||| ||||| ||||| | | | || ||||| || || || |
Sbjct 3210809 TGTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGG 3210868
Query 64039 TACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 64097
| || || ||| | |||| || |||| | || ||||| || || ||||| || | |
Sbjct 3210869 T-CATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCA 3210927
Query 64098 TA 64099
||
Sbjct 3210928 TA 3210929
Score = 179 bits (198), Expect = 5e-40
Identities = 575/881 (65%), Gaps = 12/881 (1%)
Strand=Plus/Plus
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
|||||||| || ||| | |||||||| ||||| ||||| || |||| || || |||
Sbjct 1143503 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 1143562
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132
||||| || || || || || || || || || ||| || || || || |
Sbjct 1143563 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 1143622
Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192
| ||| || || || ||||| | ||| ||||||| ||| ||||| || | ||
Sbjct 1143623 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 1143682
Query 33193 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251
||| || ||||| | | ||| | |||| ||| || || || ||||| || ||
Sbjct 1143683 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 1143741
Query 33252 AGATCTAACGGTTTCTTCA-CTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310
| || | | | | || | | | | | ||||| | || | |||||| || |
Sbjct 1143742 TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACAGGCAA 1143800
Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370
| ||| ||||| ||| || ||||| | ||| | |||||| || || || | || ||||
Sbjct 1143801 AGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCA 1143860
Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430
| | || ||| || | ||| || |||| ||| || || ||||| || || | ||||
Sbjct 1143861 TCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTT 1143920
Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT---GTATCCA-C 33486
| || ||||| || |||| | ||| || | || ||| ||||| | ||||| |
Sbjct 1143921 CCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATC 1143980
Query 33487 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33546
| || ||||| | ||||| | ||| | || || ||||| |||||||| || |
Sbjct 1143981 TAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAG 1144039
Query 33547 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 33606
| | | ||| ||| ||| || | ||||| || ||||| | ||| |||| ||
Sbjct 1144040 AATTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAG 1144099
Query 33607 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 33666
|| |||||||| || || || || ||||||||||| | || || | ||| || ||
Sbjct 1144100 TGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACC 1144159
Query 33667 TCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33726
|| | | | || |||| |||| ||||| ||||| || || || || ||||| |||
Sbjct 1144160 TCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAAC 1144219
Query 33727 GCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCCAATCATTG 33783
|| | || || ||| || | ||| ||| || || || ||||| ||||
Sbjct 1144220 GCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGA 1144279
Query 33784 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33843
| ||| || || | ||| | |||||| | |||||||| || ||||| || | |||||
Sbjct 1144280 AGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAA 1144339
Query 33844 ATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884
| |||||| || | || | ||||||||||| |||||
Sbjct 1144340 GCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 1144380
>seq83
Length=768430
Score = 147 bits (162), Expect = 3e-30
Identities = 206/287 (72%), Gaps = 4/287 (1%)
Strand=Plus/Minus
Query 63176 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63235
|||||| |||| | | ||||| ||| | | || | || |||| |||||| |||||
Sbjct 95999 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 95940
Query 63236 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 63295
|||||||| ||||| ||||| |||| || || ||| || ||||| ||||||
Sbjct 95939 CGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 95880
Query 63296 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA- 63354
| | || | | ||| | |||||||| |||||| |||||||||||||| || ||
Sbjct 95879 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATAT--ACAAAAG 95822
Query 63355 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63413
| ||||| |||||||| || || ||||| | ||||| || ||||| ||| |||| | |
Sbjct 95821 GCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGC 95762
Query 63414 AACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATA 63460
| ||| |||| | ||| ||||| ||||||| | || ||||||||
Sbjct 95761 AGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATA 95715
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946421316000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |