Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq91 116 3e-21 seq1 104 2e-17 >seq91 Length=167622 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || ||||||| || | |||||| | |||||||| | | Sbjct 23120 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 23179 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| ||||| ||||| ||||| || ||||| || ||| Sbjct 23180 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 23239 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||| | | || |||||| | ||||||| |||| | || || ||| Sbjct 23240 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 23299 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| |||||||| |||| || || || ||||||||||| || Sbjct 23300 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 23346 >seq1 Length=4213555 Score = 104 bits (114), Expect = 2e-17 Identities = 307/460 (67%), Gaps = 29/460 (6%) Strand=Plus/Plus Query 104602 ACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAA 104661 |||| ||||| || ||||| || || || ||| ||||| || | |||||| ||||| Sbjct 1143518 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 1143577 Query 104662 GGATTCAAAGTC-TTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCAC 104720 || || | | | || | ||||| | || || | | | || |||| || || || Sbjct 1143578 GGGTT-AGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAAC 1143636 Query 104721 AAATTCGATGTACTCGCACATAGAATGTGCATTCATGCCCAGCATTGCGACGGGTAAAGC 104780 |||||||| ||| | | ||| ||| || ||||| |||| | | ||||||| ||| Sbjct 1143637 AAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGC 1143696 Query 104781 GTTAGTaaaaaaa-TCTTTCTCGATGTCCACGGCTTCCTTAAACATG--TTCAGCAC-CT 104836 || | || | ||||| ||||| || || ||||| | | || ||| || || Sbjct 1143697 GTCGATGAAGTATCTCTTT-TCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAATCT 1143755 Query 104837 TGCTTTCAGAAAGCTTGTCCTCTTTGGCAATATATTTGTTGTAATAG-AGGCAGGCAAAG 104895 | || | |||||| |||| ||| || || ||||| | ||||||||| Sbjct 1143756 TTGGATCTG---GCTTGT--TCTT---CAAA-----TGATGGAATAGCAAACAGGCAAAG 1143802 Query 104896 TCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAAGCCAGGTA-G 104954 || |||||||| ||||||||||| |||| | |||||| | | ||||| || || | Sbjct 1143803 TCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATC 1143862 Query 104955 AGCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGGAGAAAAAGAC 105014 | ||||| | |||| || || ||||||||||||| ||| |||||||| || Sbjct 1143863 AAACCCTTCT------TCTTCAA-CCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACAC 1143915 Query 105015 ACCTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAAT 105054 |||||| ||| || ||||| |||| | ||| ||| || Sbjct 1143916 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTAT 1143955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935476015500