Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq88 87.8 2e-12 seq1 87.8 2e-12 >seq88 Length=341902 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 145049 AAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGAC 145108 ||||| | ||||||| || || || || | ||||||||||| | |||| ||| || Sbjct 14547 AAGTAAGGGTTGACGATTTGGAATTCACCAGATAACACACGACGAGAGTACATGTTGGAA 14488 Query 145109 GTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATG 145168 ||| | || || ||| ||||||| | |||| |||||| | || | ||||| ||||| Sbjct 14487 GTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTAGAAGCGGTTGGCATT 14428 Query 145169 TACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCC 145228 || | ||| || || || | || ||||| | |||||| || |||| | || || Sbjct 14427 GGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGCCTTCAAGTTATCC 14368 Query 145229 CAATCCCATAG 145239 || |||||||| Sbjct 14367 CATTCCCATAG 14357 >seq1 Length=4213555 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 145049 AAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGAC 145108 ||||| | ||||||| || || || || | ||||||||||| | |||| ||| || Sbjct 3209134 AAGTAAGGGTTGACGATTTGGAATTCACCAGATAACACACGACGAGAGTACATGTTGGAA 3209193 Query 145109 GTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATG 145168 ||| | || || ||| ||||||| | |||| |||||| | || | ||||| ||||| Sbjct 3209194 GTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTAGAAGCGGTTGGCATT 3209253 Query 145169 TACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCC 145228 || | ||| || || || | || ||||| | |||||| || |||| | || || Sbjct 3209254 GGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGCCTTCAAGTTATCC 3209313 Query 145229 CAATCCCATAG 145239 || |||||||| Sbjct 3209314 CATTCCCATAG 3209324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012209984000