Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1 210 2e-49 >seq1 Length=4213555 Score = 210 bits (232), Expect = 2e-49 Identities = 600/907 (66%), Gaps = 29/907 (3%) Strand=Plus/Plus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| |||||| |||||||| || ||| | ||||| |||||||| || || || | Sbjct 1143490 CATGACACCAGCCTTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGC 1143549 Query 92850 CAAAGATATCGAATTCACTA--GT-GATTGGATTCTTGGCGTTATAATA---CTTTTCAC 92903 ||| || || | ||| || || || ||| || || |||| || || ||| | || Sbjct 1143550 CAAGGAAAT-GTTTTCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTAC 1143608 Query 92904 CGAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATC 92961 | | |||| || || ||| || || |||||||| | ||| || ||||||||| Sbjct 1143609 CTAAAGCAAC-----CAGTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATC 1143663 Query 92962 ACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGATTA 93020 | ||||| || | ||| || |||||||||||| | ||| | ||||| ||||| Sbjct 1143664 AGCGTTCATACCCAATAGAGAAACGGGTAGAGCGTCGATGAAGTATCTCTTT-TCGATCT 1143722 Query 93021 CAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTT-TTGTACGACA 93076 |||| |||||| | | |||| | || | | ||||| ||| || || | | | | Sbjct 1143723 CAACAGCTTCTGTGATGATTCTTTCGAC---AATCTTTGGATCTGGCTTGTTCTTCAA-A 1143778 Query 93077 TAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCA 93136 | || | | | || || ||||||||||| || |||||||| |||| | ||||| || Sbjct 1143779 TGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCG 1143838 Query 93137 TTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA 93196 || ||| || |||||||| | || || ||||| | ||| || || | |||||| Sbjct 1143839 TTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAG 1143898 Query 93197 CTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTT 93256 |||||| ||||| | |||||||||||| || || || || | | ||| || | Sbjct 1143899 GAACCAGAGAAAAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGG 1143958 Query 93257 GCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGT 93316 || | | | |||||| | | ||||| | || |||| || || || | Sbjct 1143959 GCTTCGTCATCACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATG 1144018 Query 93317 GTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATT 93376 ||||| || || || || | | | || | || | | ||| ||||| || || || Sbjct 1144019 GTTTCAATGGCATTCAACAAGAATTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATC 1144078 Query 93377 AACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACAT 93436 |||| ||||| |||| || |||| || ||||| ||||||||| ||||||||||| Sbjct 1144079 AACAACGAATAAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACAC 1144138 Query 93437 CTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496 | ||||| | || ||||| || ||| || | || || | ||||| || || ||| Sbjct 1144139 TTGGCTTCTGGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATA 1144198 Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATA-TATGCTTTATAAAATGTTTCTCATCATCTTT 93555 |||||||| || ||||| || || | | | || || ||| | |||| | || || Sbjct 1144199 CCATCGGAAGCAGCAAAGAACGCAAGCACTCTG-GAGATGAAAAATCTCTCGTTCTCGTT 1144257 Query 93556 AA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAA 93612 | || | ||| || ||||| || || | ||||| |||||| |||||||||| Sbjct 1144258 CATTCTGTTGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAA 1144317 Query 93613 CGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGAC 93672 || || || ||| | || || ||||| || || || || | ||||| || | || Sbjct 1144318 AGAGGCCTCGGCTCTCTTATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCAC 1144377 Query 93673 AAAACGA 93679 ||||||| Sbjct 1144378 AAAACGA 1144384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860103924000