Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1 183 6e-41
seq91 181 2e-40
>seq1
Length=4213555
Score = 183 bits (202), Expect = 6e-41
Identities = 163/204 (80%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || ||||| || ||||||||||| || || || | || || || ||
Sbjct 45466 CAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCGTC 45407
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| |||||||| |||||||||||
Sbjct 45406 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTC 45347
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||| | |||||| || |||||||| | ||||| |||||||| ||||||||
Sbjct 45346 TTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAAAGTGATGGT 45287
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | ||||||||||||
Sbjct 45286 CTTACCAGTCAAGGTCTTGACGAA 45263
Score = 113 bits (124), Expect = 8e-20
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || ||||| || ||||||||||| || ||||| || || || || ||
Sbjct 1810907 CAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTC 1810966
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||||| ||||| || || || || | |||||||||||| || ||||| |||||
Sbjct 1810967 TTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCNNNNNN 1811026
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| || ||||| | ||||| |||||||| ||||| ||
Sbjct 1811027 NNNNNNNNNNNNNNNNNNNNNNTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGT 1811086
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||||| || |||||
Sbjct 1811087 CTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 1811119
>seq91
Length=167622
Score = 181 bits (200), Expect = 2e-40
Identities = 168/213 (79%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || || || ||||||||||| || || || | || || |||||
Sbjct 23332 CAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATC 23273
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| || ||||| |||||||||||
Sbjct 23272 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTC 23213
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || |||||||| | ||||| ||||||||||| || ||
Sbjct 23212 TTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGT 23153
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || |||||||||||||| || |||||
Sbjct 23152 CTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 23120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621247972000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |