Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 2e-15 >seq1 Length=4213555 Score = 98.7 bits (108), Expect = 2e-15 Identities = 350/540 (65%), Gaps = 13/540 (2%) Strand=Plus/Minus Query 42610 TGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACT 42669 |||| || ||||| || || || || ||||| | ||||| | ||||| | | | Sbjct 1144037 TGTTGAATGCCATTGAAACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGAT 1143978 Query 42670 GGAT-CGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAG 42728 |||| || || | ||| || | || || || |||| || || | ||||| || Sbjct 1143977 GGATTCGTGA-TGACGAAGCCCTATACGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAA 1143919 Query 42729 GGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATG 42788 || | || ||||| || |||| || ||||||||||| | ||| |||||| | |||| Sbjct 1143918 GGTGTGTTTTTCTCTGGTTCCTTTGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGATG 1143859 Query 42789 CCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTT 42848 || || | |||||||| |||||| | || |||| || || || |||| | |||||| Sbjct 1143858 CCAGGTTTGACCTTCTCAAACGAATTGATTTGCAGAGATGAAGGTTTGCACACCGACTTT 1143799 Query 42849 GCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCC--CTCGAAGGAGCGGGTCCGGG 42906 ||||| | || ||| || | | | ||||||| || || || ||| Sbjct 1143798 GCCTGTTTGCTATTC---CATCATTTGAAGAACAAGCCAGATCCAA--AGATTGTCGAAA 1143744 Query 42907 CCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGT 42966 |||||||| || || || |||||||| ||| | | ||| | | || ||||| | Sbjct 1143743 GAATCATCACAGAAGCTGTTGAGATCGAAAAGAGATACTTCATCGACGCTCTACCCGTTT 1143684 Query 42967 CCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATC 43026 | || | || |||||| || | ||| | | ||| || | | || || ||| | Sbjct 1143683 CTCTATTGGGTATGAACGCTGATTTGATGAACCAATACGTCGAATTTGTTGCAGACAGAC 1143624 Query 43027 TCCTG--TGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTAT 43084 | ||| ||| | ||| || ||||||| | ||| ||||||||||| Sbjct 1143623 TACTGGTTGC--TTTAGGTAACAAGAAATACTACAACGTCACTAACCCATTCGACTTTAT 1143566 Query 43085 GGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||| ||||| || |||| || || ||||| || ||||| ||| | || | |||||||| Sbjct 1143565 GGAAAACATTTCCTTGGCCGGTAAAACCAATTTCTTCGAAAAGAGAGTGTCAGACTACCA 1143506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338019576000