Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq88 89.7 5e-13 seq1 89.7 5e-13 >seq88 Length=341902 Score = 89.7 bits (98), Expect = 5e-13 Identities = 167/243 (69%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 155211 GCACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAACAAG 155270 ||||| ||| |||||| ||||| || |||| ||| ||||| |||| | || | | Sbjct 13326 GCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGG 13267 Query 155271 AAACACGAAGATAATTGAGGTTGAGGGCAGCCGGCCGCAAATAATGTAGGACTAGCGTGT 155330 ||||| || || | ||| || ||||| || || || | |||||| ||||||| Sbjct 13266 AAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGT 13207 Query 155331 GTAAAC-ATTTTGTTGGCGGTTAAGTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACC 155389 || || || || | | ||| |||||||||||| | | ||||| || | ||| Sbjct 13206 GTGAAGTATCTTAGAGACA-TTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACC 13148 Query 155390 GTGTATACCGATCGCCACGCGCATCAGCATGTGTTGAATGCGCTCCGCAACGCGGCCGTT 155449 ||| ||||||| ||||| | ||| | |||||||||| || || ||||| ||||| Sbjct 13147 GTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTCAGCAACCTTACCGTT 13088 Query 155450 GAT 155452 ||| Sbjct 13087 GAT 13085 >seq1 Length=4213555 Score = 89.7 bits (98), Expect = 5e-13 Identities = 167/243 (69%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 155211 GCACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAACAAG 155270 ||||| ||| |||||| ||||| || |||| ||| ||||| |||| | || | | Sbjct 3210355 GCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGG 3210414 Query 155271 AAACACGAAGATAATTGAGGTTGAGGGCAGCCGGCCGCAAATAATGTAGGACTAGCGTGT 155330 ||||| || || | ||| || ||||| || || || | |||||| ||||||| Sbjct 3210415 AAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGT 3210474 Query 155331 GTAAAC-ATTTTGTTGGCGGTTAAGTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACC 155389 || || || || | | ||| |||||||||||| | | ||||| || | ||| Sbjct 3210475 GTGAAGTATCTTAGAGACA-TTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACC 3210533 Query 155390 GTGTATACCGATCGCCACGCGCATCAGCATGTGTTGAATGCGCTCCGCAACGCGGCCGTT 155449 ||| ||||||| ||||| | ||| | |||||||||| || || ||||| ||||| Sbjct 3210534 GTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTCAGCAACCTTACCGTT 3210593 Query 155450 GAT 155452 ||| Sbjct 3210594 GAT 3210596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644175444000