Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq88 131 2e-25
seq1 131 2e-25
>seq88
Length=341902
Score = 131 bits (144), Expect = 2e-25
Identities = 289/432 (67%), Gaps = 6/432 (1%)
Strand=Plus/Plus
Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957
|| || || ||||| || || || || ||||| ||||| || |||||||| || |
Sbjct 13217 CCTACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCC 13276
Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017
| |||| || ||||| || |||| ||||| | ||||| ||||| | |||||
Sbjct 13277 ATGAAGGAAGATTCCATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCT 13336
Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077
|| ||| || || || || | | ||| || | ||| | | ||||| |||||
Sbjct 13337 AAGACCGCTGGTGGTATTGGTTTGCACATTCACAACATTCGTTCTACCGGTTCTTACATT 13396
Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137
||||| || || || || ||||| | | || ||| | || || ||||||||| |
Sbjct 13397 GCTGGTACTAACGGTACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACT 13456
Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197
|| || ||||| ||||| |||||| | ||| ||| | ||||| | || |||||
Sbjct 13457 GCCCGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAG 13516
Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257
|| |||||| | || | | ||| ||||| | ||||||||||||| || ||
Sbjct 13517 CCATGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGA---A 13573
Query 94258 GAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314
|| | | || |||||| | ||| || || ||| | ||||| ||||| ||||| |
Sbjct 13574 GAAATCCGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAAGAGA 13633
Query 94315 GTCGAGAAAAAC 94326
|||||||| |||
Sbjct 13634 GTCGAGAAGAAC 13645
>seq1
Length=4213555
Score = 131 bits (144), Expect = 2e-25
Identities = 289/432 (67%), Gaps = 6/432 (1%)
Strand=Plus/Minus
Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957
|| || || ||||| || || || || ||||| ||||| || |||||||| || |
Sbjct 3210464 CCTACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCC 3210405
Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017
| |||| || ||||| || |||| ||||| | ||||| ||||| | |||||
Sbjct 3210404 ATGAAGGAAGATTCCATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCT 3210345
Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077
|| ||| || || || || | | ||| || | ||| | | ||||| |||||
Sbjct 3210344 AAGACCGCTGGTGGTATTGGTTTGCACATTCACAACATTCGTTCTACCGGTTCTTACATT 3210285
Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137
||||| || || || || ||||| | | || ||| | || || ||||||||| |
Sbjct 3210284 GCTGGTACTAACGGTACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACT 3210225
Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197
|| || ||||| ||||| |||||| | ||| ||| | ||||| | || |||||
Sbjct 3210224 GCCCGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAG 3210165
Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257
|| |||||| | || | | ||| ||||| | ||||||||||||| || ||
Sbjct 3210164 CCATGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGA---A 3210108
Query 94258 GAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314
|| | | || |||||| | ||| || || ||| | ||||| ||||| ||||| |
Sbjct 3210107 GAAATCCGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAAGAGA 3210048
Query 94315 GTCGAGAAAAAC 94326
|||||||| |||
Sbjct 3210047 GTCGAGAAGAAC 3210036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722581596000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |