Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq88 131 2e-25 seq1 131 2e-25 >seq88 Length=341902 Score = 131 bits (144), Expect = 2e-25 Identities = 289/432 (67%), Gaps = 6/432 (1%) Strand=Plus/Plus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || || || ||||| || || || || ||||| ||||| || |||||||| || | Sbjct 13217 CCTACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCC 13276 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| || ||||| || |||| ||||| | ||||| ||||| | ||||| Sbjct 13277 ATGAAGGAAGATTCCATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCT 13336 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || ||| || || || || | | ||| || | ||| | | ||||| ||||| Sbjct 13337 AAGACCGCTGGTGGTATTGGTTTGCACATTCACAACATTCGTTCTACCGGTTCTTACATT 13396 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 ||||| || || || || ||||| | | || ||| | || || ||||||||| | Sbjct 13397 GCTGGTACTAACGGTACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACT 13456 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || || ||||| ||||| |||||| | ||| ||| | ||||| | || ||||| Sbjct 13457 GCCCGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAG 13516 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||| | || | | ||| ||||| | ||||||||||||| || || Sbjct 13517 CCATGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGA---A 13573 Query 94258 GAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | | || |||||| | ||| || || ||| | ||||| ||||| ||||| | Sbjct 13574 GAAATCCGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAAGAGA 13633 Query 94315 GTCGAGAAAAAC 94326 |||||||| ||| Sbjct 13634 GTCGAGAAGAAC 13645 >seq1 Length=4213555 Score = 131 bits (144), Expect = 2e-25 Identities = 289/432 (67%), Gaps = 6/432 (1%) Strand=Plus/Minus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || || || ||||| || || || || ||||| ||||| || |||||||| || | Sbjct 3210464 CCTACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCC 3210405 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| || ||||| || |||| ||||| | ||||| ||||| | ||||| Sbjct 3210404 ATGAAGGAAGATTCCATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCT 3210345 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || ||| || || || || | | ||| || | ||| | | ||||| ||||| Sbjct 3210344 AAGACCGCTGGTGGTATTGGTTTGCACATTCACAACATTCGTTCTACCGGTTCTTACATT 3210285 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 ||||| || || || || ||||| | | || ||| | || || ||||||||| | Sbjct 3210284 GCTGGTACTAACGGTACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACT 3210225 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || || ||||| ||||| |||||| | ||| ||| | ||||| | || ||||| Sbjct 3210224 GCCCGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAG 3210165 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||| | || | | ||| ||||| | ||||||||||||| || || Sbjct 3210164 CCATGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGA---A 3210108 Query 94258 GAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | | || |||||| | ||| || || ||| | ||||| ||||| ||||| | Sbjct 3210107 GAAATCCGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAAGAGA 3210048 Query 94315 GTCGAGAAAAAC 94326 |||||||| ||| Sbjct 3210047 GTCGAGAAGAAC 3210036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722581596000