Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq88 131 3e-25 seq1 131 3e-25 >seq88 Length=341902 Score = 131 bits (144), Expect = 3e-25 Identities = 332/497 (67%), Gaps = 6/497 (1%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGC-TTCTCAGATAGTACATGC 203897 |||||| | |||||||| || ||| |||| | || |||| || |||||||| | Sbjct 14887 CTTGTCAATAGTGAACTGGATAGCGGCAGATGCAG-CTTGAGTTCTTAGGTAGTACATAC 14829 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC-GTTG 203956 | ||||| | ||||||| ||| ||||| | |||||||||| || || | || |||| Sbjct 14828 CAGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTACCCATAGTTG 14769 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016 ||| | ||||||||||||| || ||| ||| ||||| ||| || || || ||| Sbjct 14768 GGGCACGA-ATGTGAATGTTCAACGATTGGGATTGATCGATATAAGCAGCACGGTCAGCG 14710 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076 ||||||| ||||||| ||| ||||| || ||||| || |||||| | | ||| | Sbjct 14709 GCCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAATCTTTTAGC 14650 Query 204077 TGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135 | ||| || | | || || || | ||| || || || || || || | | | Sbjct 14649 TCTTGTGGGATGT-TTGGCAAGTTTTGGATAGAACCATTATCAGCGATGATATGGGACTT 14591 Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195 | | | || |||| || ||||| | || || || | || || ||||||| ||| Sbjct 14590 CATAGCTTCATCCCAAATACCCAAATCAACCAAATCACGTAGCAAGTAAGGGTTGACGAT 14531 Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 || || || || || | ||| | || | | ||| |||| ||| |||| ||||| Sbjct 14530 TTGGAATTCACCAGATAACACACGACGAGAGTACATGTTGGAAGTGTATGGCTCGAAACA 14471 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 |||||||| || || || || | || || || ||||| ||||| || | || || Sbjct 14470 CTCGTTGTAACCCAAGATTTGGGATGTAGAAGCGGTTGGCATTGGAGCGAGCAACAAAGA 14411 Query 204316 GTTGCGCACACCGTATT 204332 ||| | | ||||| || Sbjct 14410 GTTTCTTAGACCGTGTT 14394 >seq1 Length=4213555 Score = 131 bits (144), Expect = 3e-25 Identities = 332/497 (67%), Gaps = 6/497 (1%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGC-TTCTCAGATAGTACATGC 203897 |||||| | |||||||| || ||| |||| | || |||| || |||||||| | Sbjct 3208794 CTTGTCAATAGTGAACTGGATAGCGGCAGATGCAG-CTTGAGTTCTTAGGTAGTACATAC 3208852 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC-GTTG 203956 | ||||| | ||||||| ||| ||||| | |||||||||| || || | || |||| Sbjct 3208853 CAGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTACCCATAGTTG 3208912 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016 ||| | ||||||||||||| || ||| ||| ||||| ||| || || || ||| Sbjct 3208913 GGGCACGA-ATGTGAATGTTCAACGATTGGGATTGATCGATATAAGCAGCACGGTCAGCG 3208971 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076 ||||||| ||||||| ||| ||||| || ||||| || |||||| | | ||| | Sbjct 3208972 GCCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAATCTTTTAGC 3209031 Query 204077 TGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135 | ||| || | | || || || | ||| || || || || || || | | | Sbjct 3209032 TCTTGTGGGATGT-TTGGCAAGTTTTGGATAGAACCATTATCAGCGATGATATGGGACTT 3209090 Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195 | | | || |||| || ||||| | || || || | || || ||||||| ||| Sbjct 3209091 CATAGCTTCATCCCAAATACCCAAATCAACCAAATCACGTAGCAAGTAAGGGTTGACGAT 3209150 Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 || || || || || | ||| | || | | ||| |||| ||| |||| ||||| Sbjct 3209151 TTGGAATTCACCAGATAACACACGACGAGAGTACATGTTGGAAGTGTATGGCTCGAAACA 3209210 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 |||||||| || || || || | || || || ||||| ||||| || | || || Sbjct 3209211 CTCGTTGTAACCCAAGATTTGGGATGTAGAAGCGGTTGGCATTGGAGCGAGCAACAAAGA 3209270 Query 204316 GTTGCGCACACCGTATT 204332 ||| | | ||||| || Sbjct 3209271 GTTTCTTAGACCGTGTT 3209287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154206056000