Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq88 131 3e-25
seq1 131 3e-25
>seq88
Length=341902
Score = 131 bits (144), Expect = 3e-25
Identities = 332/497 (67%), Gaps = 6/497 (1%)
Strand=Plus/Minus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGC-TTCTCAGATAGTACATGC 203897
|||||| | |||||||| || ||| |||| | || |||| || |||||||| |
Sbjct 14887 CTTGTCAATAGTGAACTGGATAGCGGCAGATGCAG-CTTGAGTTCTTAGGTAGTACATAC 14829
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC-GTTG 203956
| ||||| | ||||||| ||| ||||| | |||||||||| || || | || ||||
Sbjct 14828 CAGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTACCCATAGTTG 14769
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016
||| | ||||||||||||| || ||| ||| ||||| ||| || || || |||
Sbjct 14768 GGGCACGA-ATGTGAATGTTCAACGATTGGGATTGATCGATATAAGCAGCACGGTCAGCG 14710
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076
||||||| ||||||| ||| ||||| || ||||| || |||||| | | ||| |
Sbjct 14709 GCCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAATCTTTTAGC 14650
Query 204077 TGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135
| ||| || | | || || || | ||| || || || || || || | | |
Sbjct 14649 TCTTGTGGGATGT-TTGGCAAGTTTTGGATAGAACCATTATCAGCGATGATATGGGACTT 14591
Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195
| | | || |||| || ||||| | || || || | || || ||||||| |||
Sbjct 14590 CATAGCTTCATCCCAAATACCCAAATCAACCAAATCACGTAGCAAGTAAGGGTTGACGAT 14531
Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255
|| || || || || | ||| | || | | ||| |||| ||| |||| |||||
Sbjct 14530 TTGGAATTCACCAGATAACACACGACGAGAGTACATGTTGGAAGTGTATGGCTCGAAACA 14471
Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315
|||||||| || || || || | || || || ||||| ||||| || | || ||
Sbjct 14470 CTCGTTGTAACCCAAGATTTGGGATGTAGAAGCGGTTGGCATTGGAGCGAGCAACAAAGA 14411
Query 204316 GTTGCGCACACCGTATT 204332
||| | | ||||| ||
Sbjct 14410 GTTTCTTAGACCGTGTT 14394
>seq1
Length=4213555
Score = 131 bits (144), Expect = 3e-25
Identities = 332/497 (67%), Gaps = 6/497 (1%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGC-TTCTCAGATAGTACATGC 203897
|||||| | |||||||| || ||| |||| | || |||| || |||||||| |
Sbjct 3208794 CTTGTCAATAGTGAACTGGATAGCGGCAGATGCAG-CTTGAGTTCTTAGGTAGTACATAC 3208852
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC-GTTG 203956
| ||||| | ||||||| ||| ||||| | |||||||||| || || | || ||||
Sbjct 3208853 CAGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTACCCATAGTTG 3208912
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016
||| | ||||||||||||| || ||| ||| ||||| ||| || || || |||
Sbjct 3208913 GGGCACGA-ATGTGAATGTTCAACGATTGGGATTGATCGATATAAGCAGCACGGTCAGCG 3208971
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076
||||||| ||||||| ||| ||||| || ||||| || |||||| | | ||| |
Sbjct 3208972 GCCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAATCTTTTAGC 3209031
Query 204077 TGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135
| ||| || | | || || || | ||| || || || || || || | | |
Sbjct 3209032 TCTTGTGGGATGT-TTGGCAAGTTTTGGATAGAACCATTATCAGCGATGATATGGGACTT 3209090
Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195
| | | || |||| || ||||| | || || || | || || ||||||| |||
Sbjct 3209091 CATAGCTTCATCCCAAATACCCAAATCAACCAAATCACGTAGCAAGTAAGGGTTGACGAT 3209150
Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255
|| || || || || | ||| | || | | ||| |||| ||| |||| |||||
Sbjct 3209151 TTGGAATTCACCAGATAACACACGACGAGAGTACATGTTGGAAGTGTATGGCTCGAAACA 3209210
Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315
|||||||| || || || || | || || || ||||| ||||| || | || ||
Sbjct 3209211 CTCGTTGTAACCCAAGATTTGGGATGTAGAAGCGGTTGGCATTGGAGCGAGCAACAAAGA 3209270
Query 204316 GTTGCGCACACCGTATT 204332
||| | | ||||| ||
Sbjct 3209271 GTTTCTTAGACCGTGTT 3209287
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154206056000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |