Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq82 172 2e-37 seq1 158 5e-33 seq83 134 5e-26 seq100 107 8e-18 seq91 107 8e-18 seq86 96.9 1e-14 seq80 86.0 2e-11 >seq82 Length=229883 Score = 172 bits (190), Expect = 2e-37 Identities = 831/1304 (64%), Gaps = 43/1304 (3%) Strand=Plus/Plus Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267 ||||| | || || ||||| || || || | || ||||||||||| |||||||| Sbjct 75340 CAAGTTGAATACAAGGGTGAGACCAAGGTGTTCACCCCAGAAGAAATTTCCTCTATGGTC 75399 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 | || || ||||| ||||| || || ||| | ||| | | || | || || || Sbjct 75400 TTGACCAAGATGAAGGAAACTGCCGAGGCTTATTTGGGTACAACTGTGAAGGACGCTGTC 75459 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 | || || || ||||| ||||| ||| | ||| | || ||||| || ||||| || Sbjct 75460 GTGACCGTGCCAGCTTACTTCAACGATTCGCAAAGACAGGCAACCAAGGATGCTGGTACC 75519 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 ||||||||||| || ||| | |||| ||||| |||||||| || ||||| | || || Sbjct 75520 ATTGCTGGTTTGAACGTTTTGAGAATCATTAACGAACCTACTGCTGCTGCCATTGCCTAC 75579 Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507 || |||| || || | | ||| | || |||| | || ||||| ||||| Sbjct 75580 GGTCTAGATAA---GAAGGGTTCCTCTGAACACAACGTTTTGATTTTCGATTTGGGTGGT 75636 Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACC 451567 || ||| ||| |||| | | | || ||||| || | |||||||| ||||| || Sbjct 75637 GGTACTTTCGATGTTTCTTTGTTGACCATCGAAGACGGTATCTTTGAAGTGAAGGCCACT 75696 Query 451568 AATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAATGGTTGAAA 451627 |||||||| || | || ||||||||| | ||||| | | ||| | ||| Sbjct 75697 GCCGGTGATACCCACTTGGGTGGTGAAGATTTCGATAACAGATTGGTGAACCACTTGGCC 75756 Query 451628 ACTGATGTTCAACGAAAACTAAAAGTA-GATATTTCTACTAACCAAAAAGCACTTAGACG 451686 | || ||||| ||| | ||| | || | | | ||||||| | || | ||| | Sbjct 75757 AACGA-ATTCAAGAGAAAGAACAAGAAGGACTTGACCAACAACCAAAGATCATTGAGAAG 75815 Query 451687 TCTTAAAACATCAGCAGAAAAAGCTAAAATTACACT---CAGTTCAACACAAACTACTAG 451743 | | ||| | || |||| |||||| | || | | ||| | ||||| | Sbjct 75816 ATTGAGAACCGCCGCTGAAAGAGCTAAGAGAGCATTGTCCTCTTCCTCTCAAACATC--- 75872 Query 451744 TATAAACATTGATAGTTTAGTTGATGGAATGGATTATGCTACTACTCTTACCCGTGCTAA 451803 ||| | || || ||| | || || | || | | ||| | | ||| | |||| Sbjct 75873 TATCGAAATCGACTCTTTGTTCGAAGGTGTCGACTTTTACACTTCCATCACCAGAGCTAG 75932 Query 451804 ATTTGAATCAATTTGTTCCAGT-ATTTTTGCACGGGTA--ATGAAACCTGTTGATCAAGT 451860 ||| ||| | | ||| || |||| | || || || | || || || | || Sbjct 75933 ATTCGAAGAATTGTGT---GGTGATTTGTTCAGATCTACTTTGGACCCAGTCGAAAAGGT 75989 Query 451861 ATTACATGATTCTAAAATTAGTAAAG-ATAAAATTGATGAAATTGTGCTTGTAGGAGGTT 451919 || || || || || | ||| | ||||||| ||||| || || || || |||| Sbjct 75990 GTTGAGAGACGCT-AAGTTGGACAAGTCTCAAATTGAAGAAATCGTTCTAGTCGGTGGTT 76048 Query 451920 CTACACGAATTCCTAAAATTCAAGATATGTT----GTCTTCTTATTTTGGAGGAAAACAA 451975 |||| ||||||| || || ||| | || | | |||||| | | | | || ||| Sbjct 76049 CTACCAGAATTCCAAAGATCCAAAAGTTGGTTTCCGACTTCTTCAATGGTAAGGAACCAA 76108 Query 451976 CTATGTAAGAGC-GTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGC 452034 ||| | | || || |||||||||||||| || ||||| || || ||||| || Sbjct 76109 -----ACAGATCTATCAACCCAGATGAAGCTGTTGCCTACGGTGCCGCTGTCCAAGCTGC 76163 Query 452035 TATTCTAACAGGT-TCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACAC 452093 ||| | || ||| | || | || | |||| | |||| ||||||| || | Sbjct 76164 TATCTTGACCGGTGACCAATCTTCCAAGA-CCCAAGATTTGTTGTTGCTAGATGTCACTC 76222 Query 452094 CTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAA 452153 | | || | || ||||||| |||||||| || ||||| || || ||| | || Sbjct 76223 CATTGTCATTGGGTATTGAAACCGCTGGTGGTATCATGACCAAGTTGATTCCAAGAAACT 76282 Query 452154 CTTCTATTCCTTGTAAAAAG-AGTCAAACATTTAGTACA-----GCAAGTGATAACCAAC 452207 || |||| || | |||| |||| | || | | || ||| || ||||||| Sbjct 76283 CTACTATCCC---AACAAAGAAGTCCGAAATCTTCTCCACTTATGCA---GACAACCAAC 76336 Query 452208 CAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAAC 452267 | ||||| ||||||||||||||||| ||| | ||| ||| ||||| || | Sbjct 76337 CTGGTGTGTTGATTCAAGTGTTTGAAGGTGAAAGAACAAAGACCAAGGATAACAACTTGC 76396 Query 452268 TAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAA 452327 |||| | || | || || || || ||||| || || ||||| ||| Sbjct 76397 TAGGTAAGTTCGAATTGTCTGGTATCCCACCAGCTCCAAGAGGTGTCCCACAAATCGAAG 76456 Query 452328 TTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTG 452387 |||| | ||| ||||||| |||||||| | || ||| |||| | ||||| | | Sbjct 76457 TTACATTCGATATTGATGCCAATGGTATCTTGAACGTGTCTGCATTGGAAAAGGGTACCG 76516 Query 452388 GAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTG 452447 | || || || ||||| || || || ||||| | || || || ||||| |||| Sbjct 76517 GTAAGACAAGCAAGATTACCATCACCAACGATAAGGGTAGATTGTCCAAGGAAGAAATTG 76576 Query 452448 AAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAA 452491 ||| |||||| || || || || ||||||| ||| |||||| Sbjct 76577 AAAGAATGGTTTCCGACGCTGAGAAGTTCAAGGCTGAAGATGAA 76620 >seq1 Length=4213555 Score = 158 bits (174), Expect = 5e-33 Identities = 284/413 (69%), Gaps = 3/413 (1%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 || ||||| | || ||||| | || || |||||||| || || |||| |||||| Sbjct 1774406 GGTAAGCCACAAATCCAAGTCGAATACAAGGGTGAAACCAAGGTCTTCACTCCAGAAGAA 1774347 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || |||||| | | || || ||||| ||||| || ||| || | |||| Sbjct 1774346 ATCTCTTCTATGATCTTGACCAAGATGAAGGAAACTGCTGAATCCTACTTGGGTTGCAAG 1774287 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || | ||||| || |||| ||||| ||||| ||||| ||| | ||| | |||||||| Sbjct 1774286 GTCAACGATGCCGTTGTTACCGTTCCAGCTTACTTCAACGATTCCCAAAGACAAGCAACC 1774227 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || ||||||||||| || ||| | |||| || || ||||| || || Sbjct 1774226 AAGGATGCTGGTACCATTGCTGGTTTGAACGTTTTGAGAATCATCAACGAACCAACCGCC 1774167 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 ||||| | || || || | ||| || || || || ||||| || |||| | Sbjct 1774166 GCTGCCATTGCTTACGG-TTTGGACAA--GAAGGACGAAGGTGAAAAGAACGTTTTGATC 1774110 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 ||||| || ||||| || ||| ||| |||| | | | || ||||| || | || Sbjct 1774109 TTTGACTTGGGTGGTGGTACTTTCGATGTTTCTTTGTTGACCATCGAAGACGGTATCTTC 1774050 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||||| ||||| ||| |||||| ||||| | || ||||||||| | || || Sbjct 1774049 GAAGTTAAGGCTACCGCTGGTGACACTCACTTGGGTGGTGAAGATTTCGACAA 1773997 >seq83 Length=768430 Score = 134 bits (148), Expect = 5e-26 Identities = 223/321 (69%), Gaps = 11/321 (3%) Strand=Plus/Minus Query 451288 AGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTT 451347 ||||||| |||| | | | ||||| | | || || ||||||||||| |||||||| Sbjct 577697 AGCAGAAAAATACTTAGATGAGCCAGTGGATAAAGCCGTTATTACTGTTCCTGCTTATTT 577638 Query 451348 CAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCT 451407 ||||||| | || | |||||||| || ||||||||| || || || ||||| ||||| Sbjct 577637 CAATGATTCTCAGAGACAAGCAACAAAGGATGCAGGAACAATGGCGGGGTTAAAGGTTCT 577578 Query 451408 TCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA 451467 || | | ||||||||||| || ||||| || | || | | | | Sbjct 577577 CCGTGTGGTAAATGAACCTACTGCTGCTGCATTAAGTTTCGGTTTGG---------ATGC 577527 Query 451468 AACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGT 451527 | | | || | |||| || | |||| |||| || || || ||||| ||| | Sbjct 577526 ACTAAATGATGGTATTATTGCTGTTTATGATCTTGGCGGTGGTACCTTTGATATTTCCAT 577467 Query 451528 ACTTTCA-ATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAG 451586 ||| | || |||||||| || ||||| || ||||| |||||||||||||||||||||| Sbjct 577466 -CTTGGATATCGAAGATGGTGTTTTTGAGGTTAAGGCTACCAATGGTGATACTCATCTAG 577408 Query 451587 GAGGTGAAGATATTGATAATG 451607 | || || || ||||||||| Sbjct 577407 GTGGCGAGGACTTTGATAATG 577387 Score = 96.9 bits (106), Expect = 1e-14 Identities = 104/135 (77%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 420808 GTAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAAC 420867 || || ||||||||||| | ||||||||||| |||| ||| || || || || || || Sbjct 115326 GTGAAAACAACAGTTTTAGCAGGCATATTTAGCCCAATAGAGAATGTCTCTGTAGCAAAG 115385 Query 420868 A-AAACTTTAATTAAtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAAT 420926 | || |||||| || || ||| | | |||||||||| || ||||||||||||||| | Sbjct 115386 AGAACCTTTAAAAAACCTTCTTGGA-AGAGAATTTCAATAACTTCTTTTAAAATAGGTAG 115444 Query 420927 TATACCAGAATGATG 420941 | ||| |||||||| Sbjct 115445 AAGACCTGAATGATG 115459 Score = 91.5 bits (100), Expect = 6e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 421571 TTCTAAAAATTTCAGCAGTCATAA-TAACTAGACTAGCACCAGGATTAACTTTATTATCT 421629 |||| |||||||||| ||||| | ||| | || ||| ||||||| | || |||| Sbjct 116152 TTCTTAAAATTTCAGTGGTCATGACTAAACAACCT-GCATCAGGATTGATAGTAATATCA 116210 Query 421630 CCAGTCATAATTCCAATATCTGATATTTCTTCAGAAAAATCTTTATATTTTTGATTGGAT 421689 || ||||| | |||| ||| | |||| | ||| ||| |||| |||||||| || Sbjct 116211 CCGGTCATTAAACCAACGTCTCCAAATTCTGCTAAAAGTTCTCTATACTTTTGATTTGAC 116270 Query 421690 AAAGCTTTAATTGGACTAATATAAACTACCTTTTTATTTTCACTCATTGCTTTTGCTATG 421749 |||||||| |||||| |||| | || ||| ||||| |||| | || || ||| Sbjct 116271 AAAGCTTTGATTGGAGATGTATAGATAACTCTTTGCTTTTCTCTCAAAGATTGAGCAATG 116330 Query 421750 GCATATTCAGCAGGTACAGTTTTACCA 421776 |||||||| ||| || || |||||| Sbjct 116331 GCATATTCGGCAACAACTGTCTTACCA 116357 >seq100 Length=301849 Score = 107 bits (118), Expect = 8e-18 Identities = 239/356 (67%), Gaps = 6/356 (2%) Strand=Plus/Minus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 |||| |||||||| || |||| || | ||| ||||| | | || ||| | ||| Sbjct 278440 CTCCAGAAGAAATCTCCGGTATGATTTTGGGTAAGATGAAGCAGATTGCCGAAGAGTATT 278381 Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361 | || ||||| ||||||| |||| || || || || ||||||||||| ||| Sbjct 278380 TGGGCAAGAAGGTTACCCATGCAGTCGTTACCGTGCCAGCATACTTCAATGATGCGCAAA 278321 Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 | ||||||||||| || || || ||||||||||| || || | |||| |||| | Sbjct 278320 GACAAGCAACTAAGGACGCCGGTGCCATTGCTGGTTTGAACATTTTGAGAATCGTTAACG 278261 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481 ||||||| || |||||| | || || || || ||| || | |||| | ||| | Sbjct 278260 AACCTACCGCCGCTGCTATCGCCTACGG-CTTGGACAA--GACCGAAA---ACGAACACC 278207 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 | || | || | ||| || ||||| || || ||| ||| | | || || ||| Sbjct 278206 AAATCATCGTGTATGACTTGGGTGGTGGTACCTTCGATGTCTCTTTGTTGTCTATCGAAA 278147 Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 | || || |||||||| | || || ||||| ||||| | || ||||||||| Sbjct 278146 ACGGTGTCTTTGAAGTGCAAGCCACTGCCGGTGACACTCACTTGGGTGGTGAAGAT 278091 >seq91 Length=167622 Score = 107 bits (118), Expect = 8e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 451222 AGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAA 451281 ||||||||| || ||||| |||| ||||||| || || ||||| | || || ||||| Sbjct 78457 AGGTGAAACCAAGACTTTCTCTCCACAAGAAATCTCTTCCATGGTCTTGACCAAGATGAA 78398 Query 451282 AGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGC 451341 |||| || || | |||||| ||| | || || |||| || || || Sbjct 78397 GGAAATTGCTGAGGCCAAGATTGGTAAGAAGGTTGAAAAGGCTGTCGTTACCGTCCCAGC 78338 Query 451342 TTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAA 451401 || ||||| ||||| ||| | ||||| || || ||||| || ||||||||||| || Sbjct 78337 ATACTTCAACGATGCTCAAAGACAAGCTACCAAGGATGCTGGTGCCATTGCTGGTTTGAA 78278 Query 451402 TGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGG 451455 ||| | ||||||| || |||||||| || ||||| | || || || ||||| Sbjct 78277 CGTTTTGAGAATTATCAACGAACCTACCGCTGCTGCCATCGCTTACGGTCTAGG 78224 >seq86 Length=766785 Score = 96.9 bits (106), Expect = 1e-14 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 163279 GAATTAGATAAACCATATGCATCTTTACAAATTGATGGTGGTGAACAAAAAGTTGGAAAT 163338 ||||| || ||||||||| || | |||| ||||| | | | |||| ||||| Sbjct 251794 GAATTTGAAAAACCATATAAATTCTGTGAAATAGATGGAAGGATAGAGCAAGTAGGAAAC 251735 Query 163339 TTTAAAATAGAACCTCCTGGTATATTTTTAGGTAGAGGTTCCCATCCAAAAATAGGAAAA 163398 ||| || |||||||| ||| |||| ||| | ||| ||||||| || | || ||| Sbjct 251734 TTTCGTATCGAACCTCCCGGTTTATTCAGGGGTCGTGGTGCCCATCCTAAGAATGGTAAA 251675 Query 163399 TGGAAAAGAAGAATATATCCAGAAGATGTTATTTTAAATTTAGATAAAAATGCACCTATT 163458 | |||||| | |||| ||||| |||||| || | ||| | || ||||||||||| ||| Sbjct 251674 TTAAAAAGACGTGTATACCCAGAGGATGTTGTTCTTAATCTTGACAAAAATGCACCAATT 251615 Query 163459 CCA 163461 ||| Sbjct 251614 CCA 251612 >seq80 Length=309313 Score = 86.0 bits (94), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 10/195 (5%) Strand=Plus/Minus Query 409712 ATTCTTAAAAGCAATAGTTAACCCCGGTGAAATGGTGGGTGTAATTACAGCTCAATCTAT 409771 |||||||| | | ||||| | || ||||| ||||| ||||| | |||| |||||||| Sbjct 103646 ATTCTTAAGATCTATAGTCCATCCTGGTGAGATGGTTGGTGTTTTAGCAGCACAATCTAT 103587 Query 409772 TGGAGAACCTGTTACCCAGCTCAATTTAGATTCAAAACACTCTGCAGGTATGGCTAAAGG 409831 ||| ||||||| |||||| | | ||| | || || | ||| ||| |||| Sbjct 103586 TGGTGAACCTGCTACCCAAATGACCTTAAACACATTCCATTTTGCTGGTGTGGC------ 103533 Query 409832 AGCTTCTA-AAGCAAAC-TCAGGTGTTCCACGTATTGAAGAAATATTAAATTATAGTAAA 409889 || | | ||| || ||||||||||||||| | | ||||| || ||| |||| Sbjct 103532 --CTCCAAGAAGGTGACTTCAGGTGTTCCACGTTTAAAGGAAATTTTGAATGTGGCTAAA 103475 Query 409890 AACATTAAAACACCA 409904 ||||| ||||||||| Sbjct 103474 AACATGAAAACACCA 103460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975715868610800