Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq91 170 4e-37 seq1 168 1e-36 >seq91 Length=167622 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | |||||| || || || ||||| || ||||| || | | ||| Sbjct 23341 TCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGT 23282 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | |||||||| || ||||| | || |||||||||||||||||| || Sbjct 23281 TCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACC 23222 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| || || |||||| || ||||||||||| ||| ||| ||||| | Sbjct 23221 TTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAA 23162 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || || | || || ||||| | |||||| Sbjct 23161 GGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 23120 >seq1 Length=4213555 Score = 168 bits (186), Expect = 1e-36 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| |||||||| || | |||||| ||||| || ||||| || ||||| || | | ||| Sbjct 45475 TCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGT 45416 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | |||||||| || ||||| | || |||||||||||| ||||| || Sbjct 45415 TCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACC 45356 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || |||||| || ||||||||||| ||| ||| ||||| | Sbjct 45355 TTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAA 45296 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | ||||| || ||||| || || ||||| Sbjct 45295 AGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 45263 Score = 107 bits (118), Expect = 4e-18 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985 ||||| || | ||| || ||||| || ||||| || ||||| |||| |||||||| || Sbjct 1810905 CTCAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCG 1810964 Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 ||||| | |||||||| || || || | || |||||||||||||||||| ||||| Sbjct 1810965 TCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCNNNN 1811024 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105 ||||| ||||| ||| ||| ||||| | || | Sbjct 1811025 NNNNNNNNNNNNNNNNNNNNNNNNTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATA 1811084 Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||||||||| || ||||| | |||||| Sbjct 1811085 GTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 1811119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480178476700