Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq88 179 4e-40 seq1 179 4e-40 seq83 156 5e-33 >seq88 Length=341902 Score = 179 bits (198), Expect = 4e-40 Identities = 598/927 (65%), Gaps = 6/927 (1%) Strand=Plus/Minus Query 47880 GCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCA 47939 || ||||| || | ||||| ||||| || | ||| |||| |||| | |||||| Sbjct 13959 GCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCA 13900 Query 47940 GCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACAT 47999 ||| | || | | |||||||||||||| || | |||||| | |||||||| Sbjct 13899 CAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAA 13840 Query 48000 GCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTC 48059 || |||||||| ||||| || || || |||||||| | |||| ||| | ||||| | | Sbjct 13839 GCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTAC 13780 Query 48060 CAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTAT--TTAGTAT 48117 || | | |||||| | | |||| | || ||||| || ||| Sbjct 13779 CACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTAC 13720 Query 48118 ATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACA 48177 | |||| ||||||||| || || |||| ||| || || ||| || ||| | | Sbjct 13719 AATGCTTC--AAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGA 13662 Query 48178 TCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAG 48237 ||| | |||||| || | || | ||||| |||| || | |||||| ||||| || | Sbjct 13661 ACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTG 13602 Query 48238 CTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAA 48297 || || || || || | | | |||||| || || ||| || | | || | | Sbjct 13601 CTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGA 13542 Query 48298 AGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTAT 48357 |||| | ||||| | |||||||| || | || | || | |||| |||| || | Sbjct 13541 AGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGT 13482 Query 48358 TACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATAC 48417 |||| ||||| || | || | |||||| ||||| |||| | | |||||| | ||||| Sbjct 13481 TACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATAC 13422 Query 48418 CATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-T 48476 | || || |||| || || || | ||| ||| || ||| | || || ||| | Sbjct 13421 CGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGT 13362 Query 48477 GAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAA 48536 | || ||| |||||||| || | ||||| || | ||||| || | || || ||| Sbjct 13361 GCAA-ACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAA 13303 Query 48537 ATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGA 48596 || ||||| || ||| || |||| | ||| ||||| |||||||| |||||| Sbjct 13302 ATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGA 13243 Query 48597 CAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAAT 48656 ||| || | ||| || | ||| || || || || | || || | || | | Sbjct 13242 GGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGG 13183 Query 48657 TTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATT 48716 || || ||||| | ||| || ||||| | || ||||| | || || | ||| Sbjct 13182 TTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATG 13123 Query 48717 AACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCC 48776 | ||| | |||||| | |||| ||| || || ||| | | | || || |||| Sbjct 13122 ATCATGTGTTGAGGACGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCC 13063 Query 48777 AATGTTTTAAAACCAAAATAGTTGTAT 48803 || || || ||||| || |||||| || Sbjct 13062 AAGGTCTTGAAACCGAAGTAGTTGAAT 13036 >seq1 Length=4213555 Score = 179 bits (198), Expect = 4e-40 Identities = 598/927 (65%), Gaps = 6/927 (1%) Strand=Plus/Plus Query 47880 GCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCA 47939 || ||||| || | ||||| ||||| || | ||| |||| |||| | |||||| Sbjct 3209722 GCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCA 3209781 Query 47940 GCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACAT 47999 ||| | || | | |||||||||||||| || | |||||| | |||||||| Sbjct 3209782 CAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAA 3209841 Query 48000 GCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTC 48059 || |||||||| ||||| || || || |||||||| | |||| ||| | ||||| | | Sbjct 3209842 GCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTAC 3209901 Query 48060 CAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTAT--TTAGTAT 48117 || | | |||||| | | |||| | || ||||| || ||| Sbjct 3209902 CACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTAC 3209961 Query 48118 ATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACA 48177 | |||| ||||||||| || || |||| ||| || || ||| || ||| | | Sbjct 3209962 AATGCTTC--AAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGA 3210019 Query 48178 TCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAG 48237 ||| | |||||| || | || | ||||| |||| || | |||||| ||||| || | Sbjct 3210020 ACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTG 3210079 Query 48238 CTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAA 48297 || || || || || | | | |||||| || || ||| || | | || | | Sbjct 3210080 CTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGA 3210139 Query 48298 AGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTAT 48357 |||| | ||||| | |||||||| || | || | || | |||| |||| || | Sbjct 3210140 AGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGT 3210199 Query 48358 TACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATAC 48417 |||| ||||| || | || | |||||| ||||| |||| | | |||||| | ||||| Sbjct 3210200 TACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATAC 3210259 Query 48418 CATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-T 48476 | || || |||| || || || | ||| ||| || ||| | || || ||| | Sbjct 3210260 CGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGT 3210319 Query 48477 GAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAA 48536 | || ||| |||||||| || | ||||| || | ||||| || | || || ||| Sbjct 3210320 GCAA-ACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAA 3210378 Query 48537 ATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGA 48596 || ||||| || ||| || |||| | ||| ||||| |||||||| |||||| Sbjct 3210379 ATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGA 3210438 Query 48597 CAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAAT 48656 ||| || | ||| || | ||| || || || || | || || | || | | Sbjct 3210439 GGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGG 3210498 Query 48657 TTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATT 48716 || || ||||| | ||| || ||||| | || ||||| | || || | ||| Sbjct 3210499 TTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATG 3210558 Query 48717 AACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCC 48776 | ||| | |||||| | |||| ||| || || ||| | | | || || |||| Sbjct 3210559 ATCATGTGTTGAGGACGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCC 3210618 Query 48777 AATGTTTTAAAACCAAAATAGTTGTAT 48803 || || || ||||| || |||||| || Sbjct 3210619 AAGGTCTTGAAACCGAAGTAGTTGAAT 3210645 >seq83 Length=768430 Score = 156 bits (172), Expect = 5e-33 Identities = 417/631 (66%), Gaps = 25/631 (4%) Strand=Plus/Minus Query 48183 GACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATA 48242 |||||||| |||| ||||| || | |||||| | ||| || ||||| ||||| | Sbjct 95980 GACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAA 95921 Query 48243 AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCC 48302 ||||| || | | || | |||||| || || |||| || | |||| | ||||| Sbjct 95920 AATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCA 95861 Query 48303 ATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCT 48362 || ||||| ||||||||||||| || ||||| | |||| || ||||| || || Sbjct 95860 ATAATATCCCCATGCCATGGTTCCAAGTATATACAAAAGGCACCAGGGCGTTTGTTCCCA 95801 Query 48363 CCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTT 48422 |||||||| | |||||| || || |||||| |||| | | ||| || || | ||||||| Sbjct 95800 CCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTT 95741 Query 48423 GATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATT--ACTAATTGAAA 48480 || ||||||| | || || |||||| ||| | || |||||||| || || | Sbjct 95740 GAAGTACCATTCGACCCTGAGATATAAGCACCATTTGCCCTTATATTTGACACAT--GTA 95683 Query 48481 TACCTATACCACC---TGCCATTTTAGATATTAGAGCACAC-CGTTTAAGGGTATCATAA 48536 | || |||||||| |||| || ||||| | |||| | || ||| || | |||| Sbjct 95682 TTCCAATACCACCAGATGCC---TTTGATATCAAAGCAGTCTTGTGTAA-AGTCTTATAA 95627 Query 48537 ATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGA 48596 || || || ||| || ||| |||| | ||||| || |||| | ||| Sbjct 95626 ATACCATCAATAGAGTCTTCTTCCATAGCCACAAGAAAGCATGATGACAAATATTGATTT 95567 Query 48597 CAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAAT 48656 || || ||| || || || || || || |||||||| | || | ||| | ||| Sbjct 95566 ACTGTACCGCTATTGAACAAAGTAGGTGAAGCGTGAATAAAATACTTTTGTGACATTAAT 95507 Query 48657 TTATATGTTTCAATAACAGAATCTATATCCCATTGA--------TGTATACCTATAGATA 48708 | || || |||| || | |||||||| |||| | || ||| | | || | Sbjct 95506 TGGTAAGTCTCAAGTACTGCATCTATAT--CATTAAATGGTCCGTGAATAGCAAGAGCAA 95449 Query 48709 CACGCATTAACATATATTGAGGTCTTTCAACAATT---TTGTTATTTATTTTCAAAAGAT 48765 | | ||| |||||| | || || ||||| | || | || ||| | |||| | || Sbjct 95448 CTCTCATGAACATAAACTGCGGAGTTTCATAAGTTTCCTCATTGTTTCTCTTCATCAAAT 95389 Query 48766 ATGATTTTTCCAATGTTTTAAAACCAAAATA 48796 |||| || | ||| || |||||||||| Sbjct 95388 ATGACTTACAAAGTGTCTTCCAACCAAAATA 95358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108097364000