Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq88 179 4e-40
seq1 179 4e-40
seq83 156 5e-33
>seq88
Length=341902
Score = 179 bits (198), Expect = 4e-40
Identities = 598/927 (65%), Gaps = 6/927 (1%)
Strand=Plus/Minus
Query 47880 GCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCA 47939
|| ||||| || | ||||| ||||| || | ||| |||| |||| | ||||||
Sbjct 13959 GCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCA 13900
Query 47940 GCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACAT 47999
||| | || | | |||||||||||||| || | |||||| | ||||||||
Sbjct 13899 CAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAA 13840
Query 48000 GCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTC 48059
|| |||||||| ||||| || || || |||||||| | |||| ||| | ||||| | |
Sbjct 13839 GCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTAC 13780
Query 48060 CAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTAT--TTAGTAT 48117
|| | | |||||| | | |||| | || ||||| || |||
Sbjct 13779 CACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTAC 13720
Query 48118 ATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACA 48177
| |||| ||||||||| || || |||| ||| || || ||| || ||| | |
Sbjct 13719 AATGCTTC--AAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGA 13662
Query 48178 TCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAG 48237
||| | |||||| || | || | ||||| |||| || | |||||| ||||| || |
Sbjct 13661 ACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTG 13602
Query 48238 CTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAA 48297
|| || || || || | | | |||||| || || ||| || | | || | |
Sbjct 13601 CTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGA 13542
Query 48298 AGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTAT 48357
|||| | ||||| | |||||||| || | || | || | |||| |||| || |
Sbjct 13541 AGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGT 13482
Query 48358 TACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATAC 48417
|||| ||||| || | || | |||||| ||||| |||| | | |||||| | |||||
Sbjct 13481 TACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATAC 13422
Query 48418 CATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-T 48476
| || || |||| || || || | ||| ||| || ||| | || || ||| |
Sbjct 13421 CGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGT 13362
Query 48477 GAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAA 48536
| || ||| |||||||| || | ||||| || | ||||| || | || || |||
Sbjct 13361 GCAA-ACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAA 13303
Query 48537 ATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGA 48596
|| ||||| || ||| || |||| | ||| ||||| |||||||| ||||||
Sbjct 13302 ATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGA 13243
Query 48597 CAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAAT 48656
||| || | ||| || | ||| || || || || | || || | || | |
Sbjct 13242 GGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGG 13183
Query 48657 TTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATT 48716
|| || ||||| | ||| || ||||| | || ||||| | || || | |||
Sbjct 13182 TTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATG 13123
Query 48717 AACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCC 48776
| ||| | |||||| | |||| ||| || || ||| | | | || || ||||
Sbjct 13122 ATCATGTGTTGAGGACGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCC 13063
Query 48777 AATGTTTTAAAACCAAAATAGTTGTAT 48803
|| || || ||||| || |||||| ||
Sbjct 13062 AAGGTCTTGAAACCGAAGTAGTTGAAT 13036
>seq1
Length=4213555
Score = 179 bits (198), Expect = 4e-40
Identities = 598/927 (65%), Gaps = 6/927 (1%)
Strand=Plus/Plus
Query 47880 GCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCA 47939
|| ||||| || | ||||| ||||| || | ||| |||| |||| | ||||||
Sbjct 3209722 GCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCA 3209781
Query 47940 GCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACAT 47999
||| | || | | |||||||||||||| || | |||||| | ||||||||
Sbjct 3209782 CAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAA 3209841
Query 48000 GCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTC 48059
|| |||||||| ||||| || || || |||||||| | |||| ||| | ||||| | |
Sbjct 3209842 GCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTAC 3209901
Query 48060 CAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTAT--TTAGTAT 48117
|| | | |||||| | | |||| | || ||||| || |||
Sbjct 3209902 CACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTAC 3209961
Query 48118 ATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACA 48177
| |||| ||||||||| || || |||| ||| || || ||| || ||| | |
Sbjct 3209962 AATGCTTC--AAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGA 3210019
Query 48178 TCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAG 48237
||| | |||||| || | || | ||||| |||| || | |||||| ||||| || |
Sbjct 3210020 ACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTG 3210079
Query 48238 CTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAA 48297
|| || || || || | | | |||||| || || ||| || | | || | |
Sbjct 3210080 CTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGA 3210139
Query 48298 AGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTAT 48357
|||| | ||||| | |||||||| || | || | || | |||| |||| || |
Sbjct 3210140 AGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGT 3210199
Query 48358 TACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATAC 48417
|||| ||||| || | || | |||||| ||||| |||| | | |||||| | |||||
Sbjct 3210200 TACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATAC 3210259
Query 48418 CATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-T 48476
| || || |||| || || || | ||| ||| || ||| | || || ||| |
Sbjct 3210260 CGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGT 3210319
Query 48477 GAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAA 48536
| || ||| |||||||| || | ||||| || | ||||| || | || || |||
Sbjct 3210320 GCAA-ACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAA 3210378
Query 48537 ATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGA 48596
|| ||||| || ||| || |||| | ||| ||||| |||||||| ||||||
Sbjct 3210379 ATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGA 3210438
Query 48597 CAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAAT 48656
||| || | ||| || | ||| || || || || | || || | || | |
Sbjct 3210439 GGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGG 3210498
Query 48657 TTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATT 48716
|| || ||||| | ||| || ||||| | || ||||| | || || | |||
Sbjct 3210499 TTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATG 3210558
Query 48717 AACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCC 48776
| ||| | |||||| | |||| ||| || || ||| | | | || || ||||
Sbjct 3210559 ATCATGTGTTGAGGACGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCC 3210618
Query 48777 AATGTTTTAAAACCAAAATAGTTGTAT 48803
|| || || ||||| || |||||| ||
Sbjct 3210619 AAGGTCTTGAAACCGAAGTAGTTGAAT 3210645
>seq83
Length=768430
Score = 156 bits (172), Expect = 5e-33
Identities = 417/631 (66%), Gaps = 25/631 (4%)
Strand=Plus/Minus
Query 48183 GACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATA 48242
|||||||| |||| ||||| || | |||||| | ||| || ||||| ||||| |
Sbjct 95980 GACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAA 95921
Query 48243 AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCC 48302
||||| || | | || | |||||| || || |||| || | |||| | |||||
Sbjct 95920 AATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCA 95861
Query 48303 ATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCT 48362
|| ||||| ||||||||||||| || ||||| | |||| || ||||| || ||
Sbjct 95860 ATAATATCCCCATGCCATGGTTCCAAGTATATACAAAAGGCACCAGGGCGTTTGTTCCCA 95801
Query 48363 CCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTT 48422
|||||||| | |||||| || || |||||| |||| | | ||| || || | |||||||
Sbjct 95800 CCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTT 95741
Query 48423 GATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATT--ACTAATTGAAA 48480
|| ||||||| | || || |||||| ||| | || |||||||| || || |
Sbjct 95740 GAAGTACCATTCGACCCTGAGATATAAGCACCATTTGCCCTTATATTTGACACAT--GTA 95683
Query 48481 TACCTATACCACC---TGCCATTTTAGATATTAGAGCACAC-CGTTTAAGGGTATCATAA 48536
| || |||||||| |||| || ||||| | |||| | || ||| || | ||||
Sbjct 95682 TTCCAATACCACCAGATGCC---TTTGATATCAAAGCAGTCTTGTGTAA-AGTCTTATAA 95627
Query 48537 ATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGA 48596
|| || || ||| || ||| |||| | ||||| || |||| | |||
Sbjct 95626 ATACCATCAATAGAGTCTTCTTCCATAGCCACAAGAAAGCATGATGACAAATATTGATTT 95567
Query 48597 CAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAAT 48656
|| || ||| || || || || || || |||||||| | || | ||| | |||
Sbjct 95566 ACTGTACCGCTATTGAACAAAGTAGGTGAAGCGTGAATAAAATACTTTTGTGACATTAAT 95507
Query 48657 TTATATGTTTCAATAACAGAATCTATATCCCATTGA--------TGTATACCTATAGATA 48708
| || || |||| || | |||||||| |||| | || ||| | | || |
Sbjct 95506 TGGTAAGTCTCAAGTACTGCATCTATAT--CATTAAATGGTCCGTGAATAGCAAGAGCAA 95449
Query 48709 CACGCATTAACATATATTGAGGTCTTTCAACAATT---TTGTTATTTATTTTCAAAAGAT 48765
| | ||| |||||| | || || ||||| | || | || ||| | |||| | ||
Sbjct 95448 CTCTCATGAACATAAACTGCGGAGTTTCATAAGTTTCCTCATTGTTTCTCTTCATCAAAT 95389
Query 48766 ATGATTTTTCCAATGTTTTAAAACCAAAATA 48796
|||| || | ||| || ||||||||||
Sbjct 95388 ATGACTTACAAAGTGTCTTCCAACCAAAATA 95358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108097364000
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