Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq83 165 4e-36
seq88 150 9e-32
seq1 150 9e-32
>seq83
Length=768430
Score = 165 bits (182), Expect = 4e-36
Identities = 186/248 (75%), Gaps = 2/248 (1%)
Strand=Plus/Minus
Query 25901 AAATG--CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTG 25958
||||| |||||| |||| | ||||| | |||||| | ||| |||||||| | |
Sbjct 95985 AAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGAG 95926
Query 25959 CATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGA 26018
|||||||||| |||| || ||||||||||||||||||||||||||| |||| | |||||
Sbjct 95925 CATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGA 95866
Query 26019 AATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTC 26078
| |||| |||||| ||||||||||| || || ||| ||| ||| | |||
Sbjct 95865 AGTCAATAATATCCCCATGCCATGGTTCCAAGTATATACAAAAGGCACCAGGGCGTTTGT 95806
Query 26079 CTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATC 26138
||||||||||| || |||||||| || | || ||||| || ||| |||||||| |
Sbjct 95805 TCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAAC 95746
Query 26139 CAGTTGAA 26146
|| |||||
Sbjct 95745 CATTTGAA 95738
Score = 125 bits (138), Expect = 4e-24
Identities = 365/545 (67%), Gaps = 23/545 (4%)
Strand=Plus/Minus
Query 24648 TATTTTCTTTTTCTAATGTAAATTGCTTAGCT-GATACTGCTGGTTTAGTTCTAAGATAA 24706
||||||| | | || |||||||| |||| || | |||| | |||||||||||||
Sbjct 97230 TATTTTCATCATTCAAAGTAAATTGTATAGCACGAGAA-GCTGCCTGAGTTCTAAGATAA 97172
Query 24707 TACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGCA 24766
||||| || || |||||| ||||||||| | ||||| ||||||||||||| |||| |
Sbjct 97171 TACATCCCTGTCTTCAATCCCTTCTTCCATGCATAAAAGTGCATTGATGTTAATTTTCCC 97112
Query 24767 AT-GTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCT 24825
|| ||| | | | | ||| ||||||| | || |||| || || || | |||
Sbjct 97111 ATAGTTGGTTCACGC-AAATACAAGTTTAGAGACTGAGACTGATCAATGAATGGAGCTCT 97053
Query 24826 ATCTGCAGCTAAG-TCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTAT-CTC 24883
|||| | | ||| || || | |||| || || || || | ||||||||| |
Sbjct 97052 ATCT-CTGGAAAGATCGATCAATTTTTTTTGAGAAATTTCCCAAACAGTTTTGTATAAAC 96994
Query 24884 TCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTTCTCTCAATAG- 24942
|| || ||||| || | || |||| |||||| || ||||| ||| | |||
Sbjct 96993 TC-TTCATCTCCTCCGGCACACCATCAATGGTTTGAATGGAACCATTATCTTT---TAGA 96938
Query 24943 ATTCAATCTCATA---TTCGGTGTCCAAAGATTAATTTTTTCAAGATCTCTAATCAAGTG 24999
|||| || | || || || |||| | || ||||| || ||| | || |
Sbjct 96937 ATTCTATTTTTTAGCTTTTCGT-TCCATACTTTCATTTTACAAAAATCATCCACCATATA 96879
Query 25000 TTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCT--TATTGATAAGTTTGAAGTG 25057
|| ||| | ||| ||||||||||||| | || || || || |||| || || ||
Sbjct 96878 TTGATTAACGATTGTAAATTCTCCAGATAGCACCCTCCTGGAATAGATA--TTAGAGGTC 96821
Query 25058 AATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAAT 25117
| ||||| || |||| | || || ||||||||||| || || |||||||||
Sbjct 96820 ATAGGTTCGAACGATTCTGTGAAACCCAATATTTGAGAAGTTGAGGCAGTTGGCATTGGA 96761
Query 25118 GCTATTAATAGCGAATTTCTCAAACCA---TATTTAACAATCTCTTGTTTTAATTTATCC 25174
| | ||| || ||||| ||||||||| ||| ||| | ||| ||||| |||||
Sbjct 96760 CCAACTAAAAGTGAATTCCTCAAACCAGGCCCATTAGTAATTTGTTGCTTTAAGGTATCC 96701
Query 25175 CAATC 25179
|||||
Sbjct 96700 CAATC 96696
>seq88
Length=341902
Score = 150 bits (166), Expect = 9e-32
Identities = 323/478 (68%), Gaps = 6/478 (1%)
Strand=Plus/Minus
Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948
|||||| |||| ||| |||||| | || | ||| ||| ||| ||| || | ||||||
Sbjct 13671 TTTGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGG 13612
Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTT 26008
||||| | ||| || || ||||| || | |||||||| || ||||| |||||| |
Sbjct 13611 ATCCATAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTG 13552
Query 26009 AGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCT 26068
| || | ||| || || ||||||||||||||||| || | || | || || |||
Sbjct 13551 ATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCA 13492
Query 26069 TTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATT 26128
||| || |||||||| || ||||| | ||||| | |||||||| | ||||
Sbjct 13491 GGTCTCTTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATT 13432
Query 26129 GGAACTAATCCAGTT-GAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187
|||| |||| | ||| ||| ||||| || | | ||| | || || || || | |||
Sbjct 13431 GGAA-TAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAAT 13373
Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAA 26245
| |||| || | ||| || |||||||| || || || ||||| || | ||
Sbjct 13372 GTTGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAA 13313
Query 26246 ACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGAT 26305
| || ||| |||| |||| ||| ||| | ||||| | | || ||||| || ||
Sbjct 13312 A--GTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGAC 13255
Query 26306 AATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATC 26363
| ||| | ||||| || || | ||| || | ||| || | ||| || || | ||||
Sbjct 13254 ATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATC 13197
>seq1
Length=4213555
Score = 150 bits (166), Expect = 9e-32
Identities = 323/478 (68%), Gaps = 6/478 (1%)
Strand=Plus/Plus
Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948
|||||| |||| ||| |||||| | || | ||| ||| ||| ||| || | ||||||
Sbjct 3210010 TTTGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGG 3210069
Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTT 26008
||||| | ||| || || ||||| || | |||||||| || ||||| |||||| |
Sbjct 3210070 ATCCATAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTG 3210129
Query 26009 AGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCT 26068
| || | ||| || || ||||||||||||||||| || | || | || || |||
Sbjct 3210130 ATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCA 3210189
Query 26069 TTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATT 26128
||| || |||||||| || ||||| | ||||| | |||||||| | ||||
Sbjct 3210190 GGTCTCTTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATT 3210249
Query 26129 GGAACTAATCCAGTT-GAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187
|||| |||| | ||| ||| ||||| || | | ||| | || || || || | |||
Sbjct 3210250 GGAA-TAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAAT 3210308
Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAA 26245
| |||| || | ||| || |||||||| || || || ||||| || | ||
Sbjct 3210309 GTTGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAA 3210368
Query 26246 ACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGAT 26305
| || ||| |||| |||| ||| ||| | ||||| | | || ||||| || ||
Sbjct 3210369 A--GTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGAC 3210426
Query 26306 AATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATC 26363
| ||| | ||||| || || | ||| || | ||| || | ||| || || | ||||
Sbjct 3210427 ATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATC 3210484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039691607500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |