Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1 129 1e-24 seq91 120 5e-22 >seq1 Length=4213555 Score = 129 bits (142), Expect = 1e-24 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 |||||||||||||| |||| || || || || | || | || || || || || Sbjct 45486 ATAATACCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAG 45427 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || || |||| || |||| |||||||| ||||||||||| || ||||| |||||||| Sbjct 45426 TCAGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCT 45367 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || ||||| || ||||| || || || ||||| || || || || ||| Sbjct 45366 GGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGAT 45307 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060 || ||||| | ||| ||||| |||||||| || || || | ||| Sbjct 45306 TCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 45263 >seq91 Length=167622 Score = 120 bits (132), Expect = 5e-22 Identities = 168/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893 ||| || ||||||||| | || || || || || | |||| || || || || Sbjct 23355 TTCTTACCACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTG 23296 Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953 || || || |||| || | || |||||||| ||||||||||| || ||||| |||||| Sbjct 23295 TAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGG 23236 Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013 || || || || ||||| || ||||| || ||| || ||||| || || || || Sbjct 23235 TCTGGAGGAATACCTTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAA 23176 Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| ||||| | ||||| || |||||||||| || || | ||| || ||||| Sbjct 23175 GATTCGACTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 23120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905134868580000