Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq88 161 3e-34 seq1 161 3e-34 seq83 111 5e-19 seq81 98.7 3e-15 seq80 98.7 3e-15 >seq88 Length=341902 Score = 161 bits (178), Expect = 3e-34 Identities = 343/509 (67%), Gaps = 5/509 (1%) Strand=Plus/Minus Query 156026 TGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCG 156082 |||||| | |||| || || |||| |||||| ||||| || || || || || Sbjct 13519 TGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACG 13460 Query 156083 AGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142 ||||| || ||||| |||| | ||| ||||||||||| || ||||| || || || || Sbjct 13459 GGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTACC 13400 Query 156143 GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCA 156202 ||| | ||||| | || |||| || ||||| || | ||||||||||| | Sbjct 13399 AGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCGGT 13340 Query 156203 TTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTC 156262 ||||| || || |||||||| | ||| | | ||||||||||||| ||||| || | Sbjct 13339 CTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTT 13280 Query 156263 CATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGT 156322 ||| | | ||| | || || | ||| || | || || ||||| ||||| ||||| Sbjct 13279 CATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGT 13220 Query 156323 AGGTGTTGCATGAATAAAATA-CTTATTAGACATATAATCGTATGTCTCCTTAATCTTCT 156381 ||| | || || | || || |||| |||||| | ||| || ||| || ||| | Sbjct 13219 AGGCGAAGCGTGTGTGAAGTATCTTA-GAGACATTAGGTTGTAAGTTTCCAAAACCTTTT 13161 Query 156382 CAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTA 156441 ||| || ||||| |||| || || || ||||| ||| || |||||||| || Sbjct 13160 CAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTCAG 13101 Query 156442 CAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAAT 156501 ||| | || | |||| || | ||| | ||||||| || || || ||||| || | Sbjct 13100 CAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTAGT 13041 Query 156502 CAAACAGAAAATCACGGTTGTAATCAATC 156530 || | ||||| | || ||| ||||| Sbjct 13040 TGAATTGGAAATCTCTGTCGTAGACAATC 13012 Score = 96.9 bits (106), Expect = 1e-14 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAG 155648 ||||| |||| ||||| || || || || | || |||||| || || ||||| Sbjct 13956 ATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCACAA 13897 Query 155649 CACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCA 155708 |||| ||| ||| |||||| || || || ||||| || ||| || ||||||||||| Sbjct 13896 CACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCA 13837 Query 155709 TCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCA 155754 ||||||||||| ||| ||||||| || || || | || || |||| Sbjct 13836 TCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCA 13791 >seq1 Length=4213555 Score = 161 bits (178), Expect = 3e-34 Identities = 343/509 (67%), Gaps = 5/509 (1%) Strand=Plus/Plus Query 156026 TGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCG 156082 |||||| | |||| || || |||| |||||| ||||| || || || || || Sbjct 3210162 TGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACG 3210221 Query 156083 AGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142 ||||| || ||||| |||| | ||| ||||||||||| || ||||| || || || || Sbjct 3210222 GGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTACC 3210281 Query 156143 GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCA 156202 ||| | ||||| | || |||| || ||||| || | ||||||||||| | Sbjct 3210282 AGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCGGT 3210341 Query 156203 TTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTC 156262 ||||| || || |||||||| | ||| | | ||||||||||||| ||||| || | Sbjct 3210342 CTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTT 3210401 Query 156263 CATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGT 156322 ||| | | ||| | || || | ||| || | || || ||||| ||||| ||||| Sbjct 3210402 CATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGT 3210461 Query 156323 AGGTGTTGCATGAATAAAATA-CTTATTAGACATATAATCGTATGTCTCCTTAATCTTCT 156381 ||| | || || | || || |||| |||||| | ||| || ||| || ||| | Sbjct 3210462 AGGCGAAGCGTGTGTGAAGTATCTTA-GAGACATTAGGTTGTAAGTTTCCAAAACCTTTT 3210520 Query 156382 CAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTA 156441 ||| || ||||| |||| || || || ||||| ||| || |||||||| || Sbjct 3210521 CAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTCAG 3210580 Query 156442 CAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAAT 156501 ||| | || | |||| || | ||| | ||||||| || || || ||||| || | Sbjct 3210581 CAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTAGT 3210640 Query 156502 CAAACAGAAAATCACGGTTGTAATCAATC 156530 || | ||||| | || ||| ||||| Sbjct 3210641 TGAATTGGAAATCTCTGTCGTAGACAATC 3210669 Score = 109 bits (120), Expect = 2e-18 Identities = 333/502 (66%), Gaps = 16/502 (3%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 || || || ||||||| | | ||||| || || | | ||| | ||| ||||| | Sbjct 3509352 CTGTCGAATCTACCAGGTCTCATCAATGCGGGATCAAGAACATCAGGTCTATTTGTACCG 3509293 Query 288910 GCCAATACAACAATA-GAT-TCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGAT 288967 || | |||||||| ||| || | | | || |||||||| ||||| ||||| Sbjct 3509292 GCAAGAACAACAATTTGATCTCTGGAAG--TGAAACCATCCATCTCAACTAAAAGTTGAT 3509235 Query 288968 TAAGTGTTTGTTCCCTTTCATCATTTGAACCTC---TTGAATCACCCGAATCGCTCCttt 289024 | | || ||| |||||||| |||| ||||| ||| | |||| || ||| ||| Sbjct 3509234 TCAAAGTGGCTTCTCTTTCATCGTTTGCACCTCCCATTGCACCACCTTT-TC-CTC-TTT 3509178 Query 289025 ttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAG--AATTTTGTCTCGC 289082 ||||||| |||||| |||||||| | ||| || | || | || ||| || || Sbjct 3509177 CCTTACCAATAGCATCGATTTCGTCCACGAAGATAATTGCTGGGGCTAACTTT--CTTGC 3509120 Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142 | | || || || | |||||||| || |||| ||||||| |||||||||||||||| Sbjct 3509119 GTTCTCGAACAAATCACGAACACGGGAAGCACCAACACCAACAAACATTTCTACAAATTC 3509060 Query 289143 AGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202 ||| | || || | |||| ||| |||||| || || ||| | || | | Sbjct 3509059 GGAACCTGACACAGACAAAAATGGAACACCTGCTTCACCGGCAGTTGCTTTTGCTAACAA 3509000 Query 289203 TGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAG 289261 || |||||||| || ||||| || ||| | | || |||| | || || |||| Sbjct 3508999 AGTTTTACCTGTACCTGGTGGACCAGATAAAATTGCACCTCTTGGGATTTGAGCACCCAA 3508940 Query 289262 CAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTG 289321 | || || ||||| || ||| ||| || | || | |||| || ||| ||||| Sbjct 3508939 C-TTTTTGTACTTCTCTGGCTTCTGTAAGAAATGGACGAATTCCATAATTTCGCTTTTTG 3508881 Query 289322 CCTCATCACATCCTGCTACATC 289343 | |||| ||| ||||| ||||| Sbjct 3508880 CTTCATTACAACCTGCCACATC 3508859 Score = 96.9 bits (106), Expect = 1e-14 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAG 155648 ||||| |||| ||||| || || || || | || |||||| || || ||||| Sbjct 3209725 ATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCACAA 3209784 Query 155649 CACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCA 155708 |||| ||| ||| |||||| || || || ||||| || ||| || ||||||||||| Sbjct 3209785 CACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCA 3209844 Query 155709 TCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCA 155754 ||||||||||| ||| ||||||| || || || | || || |||| Sbjct 3209845 TCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCA 3209890 >seq83 Length=768430 Score = 111 bits (122), Expect = 5e-19 Identities = 483/753 (64%), Gaps = 17/753 (2%) Strand=Plus/Minus Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687 || || || || || ||||| || || ||||| ||| ||| ||||| || |||||| Sbjct 96241 CTATACTCCACGATTTCACAACAAAGATTAGACGACTTAATGACACCTAAGTTTTTCTGG 96182 Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747 || || || || || | |||||| || || ||| | || |||||||||| | || Sbjct 96181 TTGGACTTCTCATTGCATGAATCCTTATAAAGCATGAAAGGAACTCCTGTCTCCGTTTGA 96122 Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTG-TTGTATCTGCCTTC 155806 | ||||| | ||| | | | || || |||| || ||| | | ||| Sbjct 96121 CTTTGTAGAATTTCCGACCAAATTTGTTGCGCTTTCATTTTTTTCATTGGAA-TCAATTC 96063 Query 155807 CGACTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCA 155864 |||||| ||||||||| | ||| | | || ||| || || ||| | || Sbjct 96062 TCGCTCATACTTTTCATATA--GGGTTTTGAACTCTGTACCATAGCAGTCAGATAAACCT 96005 Query 155865 GGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAAT 155924 | | ||| || | ||| | |||||| || |||| ||||| | |||||| Sbjct 96004 GTTGCTTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAA 95945 Query 155925 ACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGA 155984 | ||| ||| | |||||| || | ||| | ||| | || || | |||||| Sbjct 95944 AGATCCGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGA 95885 Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044 ||||| | ||| | |||||| || |||||| ||| ||| |||| || ||| | Sbjct 95884 TTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATATACAA 95825 Query 156045 AAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101 || |||| | ||| ||||| ||||| ||||| | || || || || || || Sbjct 95824 AAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACC 95765 Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161 | |||||||||| | |||||| ||||| ||||| | || |||| | |||| | Sbjct 95764 CGCAGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATAAGCACCATTT 95705 Query 156162 GAGCGAACATTATGA-ATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCA 156220 | | | ||| ||| | ||||| |||||||||||| || || || || ||| Sbjct 95704 GCCCTTATATT-TGACACATGTATTCCAATACCACCAGATGCCTTTGATATCAAAGCAGT 95646 Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCA 156280 | | || ||| || ||||||| |||||||| || |||||||| | | ||| |||| Sbjct 95645 CTTGTGTAAAGTCTTATAAATACCATCAATAGAGTCTTCTTCCATAGCCACAAGAAAGCA 95586 Query 156281 CGA--ACTTA-ATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAAT 156337 || || | ||||| | || | || ||||| | ||||||| || ||||| Sbjct 95585 TGATGACAAATATTGATTTACTG---TACCGCTATTGAACAAAGTAGGTGAAGCGTGAAT 95529 Query 156338 AAAATACTTATTAGACATATAATCGTATGTCTC 156370 ||||||||| | ||||| | | ||| ||||| Sbjct 95528 AAAATACTTTTGTGACATTAATTGGTAAGTCTC 95496 >seq81 Length=391803 Score = 98.7 bits (108), Expect = 3e-15 Identities = 159/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 60142 TGTGAAAATATACCTCTCGGAT--GCTGCGTCCTTGCCACCCATAAGACGGGTTCCAAAT 60199 |||||| ||||| ||||||| |||| || || ||||| || | ||| || || Sbjct 188283 TGTGAAGATATA--TCTCGGAGCAGCTGAATCTTTACCACCAGTAGCTCTGGTACCGAAA 188226 Query 60200 TGTCCGTTTGGCTGGAATAGATTAATGTTGTTAGAGCCTACGAAATTTTGAGCGAGACCA 60259 || || |||| || | | ||| |||||||| || || |||| ||| || | |||| Sbjct 188225 GCACCATTAGGCTTCAACAAGTAAATATTGTTAGAACCAACAAAATCTTGGGCTAAACCA 188166 Query 60260 ACAATAGCACCATTTAAACTGGCTTCACCGTGATGATATCCAGAATGTTCTGAAACATAT 60319 ||||| | || || |||||||||||||||||||| | |||||| |||||||| Sbjct 188165 ACAATCGTTTGATATAGGGAAGCTTCACCGTGATGATATCCGGTATGTTCAGAAACATAA 188106 Query 60320 CCACTGAATTGTGCGACTTTAATTTCGGAGTGGAGTTTTTTCTTGAA 60366 |||| | ||| || || || ||||| || | | ||| |||| || Sbjct 188105 CCACCTAGTTGAGCAACCTTGATTTCTGATTTTAAATTTCTCTTAAA 188059 >seq80 Length=309313 Score = 98.7 bits (108), Expect = 3e-15 Identities = 175/253 (69%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612 ||| ||| || |||||| ||||| | | || | ||||||||| || ||||| || || Sbjct 104243 ATCGTAATGAACCATAATATCTTCTAAAGCTTTAACTAAACGACGTTGGATATACCCGGT 104302 Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672 | |||||| ||||| |||||||| | ||| ||||||||||||| |||||||| || Sbjct 104303 CTCTGCTGTTTTCACAGCAGTATCAATCAAACCTTCACGACCACCCATCGCATGGAAAAA 104362 Query 302673 TAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731 | ||||| || | | || | ||| || ||| | ||||||||||| | || | Sbjct 104363 GAACTCTTGAGGAGTTAAACCTCTCAAGTAA-GAGTTTTCAACGAAACCCTTTGATTCTG 104421 Query 302732 GCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATAC 302791 | || | ||| ||| | || ||||| ||||| | | || | ||| | | |||| Sbjct 104422 GAGAGTAGTCATCCTTAGAGAAATGTGGTAGGGTACGATCGGCAAACCCGAAAGCAATAC 104481 Query 302792 GCTTTCCATCAAC 302804 |||| || || || Sbjct 104482 GCTTACCTTCCAC 104494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815714233700