Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq88 161 3e-34
seq1 161 3e-34
seq83 111 5e-19
seq81 98.7 3e-15
seq80 98.7 3e-15
>seq88
Length=341902
Score = 161 bits (178), Expect = 3e-34
Identities = 343/509 (67%), Gaps = 5/509 (1%)
Strand=Plus/Minus
Query 156026 TGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCG 156082
|||||| | |||| || || |||| |||||| ||||| || || || || ||
Sbjct 13519 TGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACG 13460
Query 156083 AGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142
||||| || ||||| |||| | ||| ||||||||||| || ||||| || || || ||
Sbjct 13459 GGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTACC 13400
Query 156143 GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCA 156202
||| | ||||| | || |||| || ||||| || | ||||||||||| |
Sbjct 13399 AGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCGGT 13340
Query 156203 TTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTC 156262
||||| || || |||||||| | ||| | | ||||||||||||| ||||| || |
Sbjct 13339 CTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTT 13280
Query 156263 CATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGT 156322
||| | | ||| | || || | ||| || | || || ||||| ||||| |||||
Sbjct 13279 CATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGT 13220
Query 156323 AGGTGTTGCATGAATAAAATA-CTTATTAGACATATAATCGTATGTCTCCTTAATCTTCT 156381
||| | || || | || || |||| |||||| | ||| || ||| || ||| |
Sbjct 13219 AGGCGAAGCGTGTGTGAAGTATCTTA-GAGACATTAGGTTGTAAGTTTCCAAAACCTTTT 13161
Query 156382 CAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTA 156441
||| || ||||| |||| || || || ||||| ||| || |||||||| ||
Sbjct 13160 CAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTCAG 13101
Query 156442 CAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAAT 156501
||| | || | |||| || | ||| | ||||||| || || || ||||| || |
Sbjct 13100 CAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTAGT 13041
Query 156502 CAAACAGAAAATCACGGTTGTAATCAATC 156530
|| | ||||| | || ||| |||||
Sbjct 13040 TGAATTGGAAATCTCTGTCGTAGACAATC 13012
Score = 96.9 bits (106), Expect = 1e-14
Identities = 121/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAG 155648
||||| |||| ||||| || || || || | || |||||| || || |||||
Sbjct 13956 ATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCACAA 13897
Query 155649 CACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCA 155708
|||| ||| ||| |||||| || || || ||||| || ||| || |||||||||||
Sbjct 13896 CACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCA 13837
Query 155709 TCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCA 155754
||||||||||| ||| ||||||| || || || | || || ||||
Sbjct 13836 TCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCA 13791
>seq1
Length=4213555
Score = 161 bits (178), Expect = 3e-34
Identities = 343/509 (67%), Gaps = 5/509 (1%)
Strand=Plus/Plus
Query 156026 TGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCG 156082
|||||| | |||| || || |||| |||||| ||||| || || || || ||
Sbjct 3210162 TGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACG 3210221
Query 156083 AGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142
||||| || ||||| |||| | ||| ||||||||||| || ||||| || || || ||
Sbjct 3210222 GGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTACC 3210281
Query 156143 GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCA 156202
||| | ||||| | || |||| || ||||| || | ||||||||||| |
Sbjct 3210282 AGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCGGT 3210341
Query 156203 TTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTC 156262
||||| || || |||||||| | ||| | | ||||||||||||| ||||| || |
Sbjct 3210342 CTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTT 3210401
Query 156263 CATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGT 156322
||| | | ||| | || || | ||| || | || || ||||| ||||| |||||
Sbjct 3210402 CATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGT 3210461
Query 156323 AGGTGTTGCATGAATAAAATA-CTTATTAGACATATAATCGTATGTCTCCTTAATCTTCT 156381
||| | || || | || || |||| |||||| | ||| || ||| || ||| |
Sbjct 3210462 AGGCGAAGCGTGTGTGAAGTATCTTA-GAGACATTAGGTTGTAAGTTTCCAAAACCTTTT 3210520
Query 156382 CAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTA 156441
||| || ||||| |||| || || || ||||| ||| || |||||||| ||
Sbjct 3210521 CAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTCAG 3210580
Query 156442 CAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAAT 156501
||| | || | |||| || | ||| | ||||||| || || || ||||| || |
Sbjct 3210581 CAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTAGT 3210640
Query 156502 CAAACAGAAAATCACGGTTGTAATCAATC 156530
|| | ||||| | || ||| |||||
Sbjct 3210641 TGAATTGGAAATCTCTGTCGTAGACAATC 3210669
Score = 109 bits (120), Expect = 2e-18
Identities = 333/502 (66%), Gaps = 16/502 (3%)
Strand=Plus/Minus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
|| || || ||||||| | | ||||| || || | | ||| | ||| ||||| |
Sbjct 3509352 CTGTCGAATCTACCAGGTCTCATCAATGCGGGATCAAGAACATCAGGTCTATTTGTACCG 3509293
Query 288910 GCCAATACAACAATA-GAT-TCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGAT 288967
|| | |||||||| ||| || | | | || |||||||| ||||| |||||
Sbjct 3509292 GCAAGAACAACAATTTGATCTCTGGAAG--TGAAACCATCCATCTCAACTAAAAGTTGAT 3509235
Query 288968 TAAGTGTTTGTTCCCTTTCATCATTTGAACCTC---TTGAATCACCCGAATCGCTCCttt 289024
| | || ||| |||||||| |||| ||||| ||| | |||| || ||| |||
Sbjct 3509234 TCAAAGTGGCTTCTCTTTCATCGTTTGCACCTCCCATTGCACCACCTTT-TC-CTC-TTT 3509178
Query 289025 ttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAG--AATTTTGTCTCGC 289082
||||||| |||||| |||||||| | ||| || | || | || ||| || ||
Sbjct 3509177 CCTTACCAATAGCATCGATTTCGTCCACGAAGATAATTGCTGGGGCTAACTTT--CTTGC 3509120
Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142
| | || || || | |||||||| || |||| ||||||| ||||||||||||||||
Sbjct 3509119 GTTCTCGAACAAATCACGAACACGGGAAGCACCAACACCAACAAACATTTCTACAAATTC 3509060
Query 289143 AGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202
||| | || || | |||| ||| |||||| || || ||| | || | |
Sbjct 3509059 GGAACCTGACACAGACAAAAATGGAACACCTGCTTCACCGGCAGTTGCTTTTGCTAACAA 3509000
Query 289203 TGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAG 289261
|| |||||||| || ||||| || ||| | | || |||| | || || ||||
Sbjct 3508999 AGTTTTACCTGTACCTGGTGGACCAGATAAAATTGCACCTCTTGGGATTTGAGCACCCAA 3508940
Query 289262 CAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTG 289321
| || || ||||| || ||| ||| || | || | |||| || ||| |||||
Sbjct 3508939 C-TTTTTGTACTTCTCTGGCTTCTGTAAGAAATGGACGAATTCCATAATTTCGCTTTTTG 3508881
Query 289322 CCTCATCACATCCTGCTACATC 289343
| |||| ||| ||||| |||||
Sbjct 3508880 CTTCATTACAACCTGCCACATC 3508859
Score = 96.9 bits (106), Expect = 1e-14
Identities = 121/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAG 155648
||||| |||| ||||| || || || || | || |||||| || || |||||
Sbjct 3209725 ATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCACAA 3209784
Query 155649 CACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCA 155708
|||| ||| ||| |||||| || || || ||||| || ||| || |||||||||||
Sbjct 3209785 CACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCA 3209844
Query 155709 TCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCA 155754
||||||||||| ||| ||||||| || || || | || || ||||
Sbjct 3209845 TCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCA 3209890
>seq83
Length=768430
Score = 111 bits (122), Expect = 5e-19
Identities = 483/753 (64%), Gaps = 17/753 (2%)
Strand=Plus/Minus
Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687
|| || || || || ||||| || || ||||| ||| ||| ||||| || ||||||
Sbjct 96241 CTATACTCCACGATTTCACAACAAAGATTAGACGACTTAATGACACCTAAGTTTTTCTGG 96182
Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747
|| || || || || | |||||| || || ||| | || |||||||||| | ||
Sbjct 96181 TTGGACTTCTCATTGCATGAATCCTTATAAAGCATGAAAGGAACTCCTGTCTCCGTTTGA 96122
Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTG-TTGTATCTGCCTTC 155806
| ||||| | ||| | | | || || |||| || ||| | | |||
Sbjct 96121 CTTTGTAGAATTTCCGACCAAATTTGTTGCGCTTTCATTTTTTTCATTGGAA-TCAATTC 96063
Query 155807 CGACTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCA 155864
|||||| ||||||||| | ||| | | || ||| || || ||| | ||
Sbjct 96062 TCGCTCATACTTTTCATATA--GGGTTTTGAACTCTGTACCATAGCAGTCAGATAAACCT 96005
Query 155865 GGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAAT 155924
| | ||| || | ||| | |||||| || |||| ||||| | ||||||
Sbjct 96004 GTTGCTTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAA 95945
Query 155925 ACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGA 155984
| ||| ||| | |||||| || | ||| | ||| | || || | ||||||
Sbjct 95944 AGATCCGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGA 95885
Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044
||||| | ||| | |||||| || |||||| ||| ||| |||| || ||| |
Sbjct 95884 TTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATATACAA 95825
Query 156045 AAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101
|| |||| | ||| ||||| ||||| ||||| | || || || || || ||
Sbjct 95824 AAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACC 95765
Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161
| |||||||||| | |||||| ||||| ||||| | || |||| | |||| |
Sbjct 95764 CGCAGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATAAGCACCATTT 95705
Query 156162 GAGCGAACATTATGA-ATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCA 156220
| | | ||| ||| | ||||| |||||||||||| || || || || |||
Sbjct 95704 GCCCTTATATT-TGACACATGTATTCCAATACCACCAGATGCCTTTGATATCAAAGCAGT 95646
Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCA 156280
| | || ||| || ||||||| |||||||| || |||||||| | | ||| ||||
Sbjct 95645 CTTGTGTAAAGTCTTATAAATACCATCAATAGAGTCTTCTTCCATAGCCACAAGAAAGCA 95586
Query 156281 CGA--ACTTA-ATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAAT 156337
|| || | ||||| | || | || ||||| | ||||||| || |||||
Sbjct 95585 TGATGACAAATATTGATTTACTG---TACCGCTATTGAACAAAGTAGGTGAAGCGTGAAT 95529
Query 156338 AAAATACTTATTAGACATATAATCGTATGTCTC 156370
||||||||| | ||||| | | ||| |||||
Sbjct 95528 AAAATACTTTTGTGACATTAATTGGTAAGTCTC 95496
>seq81
Length=391803
Score = 98.7 bits (108), Expect = 3e-15
Identities = 159/227 (70%), Gaps = 4/227 (2%)
Strand=Plus/Minus
Query 60142 TGTGAAAATATACCTCTCGGAT--GCTGCGTCCTTGCCACCCATAAGACGGGTTCCAAAT 60199
|||||| ||||| ||||||| |||| || || ||||| || | ||| || ||
Sbjct 188283 TGTGAAGATATA--TCTCGGAGCAGCTGAATCTTTACCACCAGTAGCTCTGGTACCGAAA 188226
Query 60200 TGTCCGTTTGGCTGGAATAGATTAATGTTGTTAGAGCCTACGAAATTTTGAGCGAGACCA 60259
|| || |||| || | | ||| |||||||| || || |||| ||| || | ||||
Sbjct 188225 GCACCATTAGGCTTCAACAAGTAAATATTGTTAGAACCAACAAAATCTTGGGCTAAACCA 188166
Query 60260 ACAATAGCACCATTTAAACTGGCTTCACCGTGATGATATCCAGAATGTTCTGAAACATAT 60319
||||| | || || |||||||||||||||||||| | |||||| ||||||||
Sbjct 188165 ACAATCGTTTGATATAGGGAAGCTTCACCGTGATGATATCCGGTATGTTCAGAAACATAA 188106
Query 60320 CCACTGAATTGTGCGACTTTAATTTCGGAGTGGAGTTTTTTCTTGAA 60366
|||| | ||| || || || ||||| || | | ||| |||| ||
Sbjct 188105 CCACCTAGTTGAGCAACCTTGATTTCTGATTTTAAATTTCTCTTAAA 188059
>seq80
Length=309313
Score = 98.7 bits (108), Expect = 3e-15
Identities = 175/253 (69%), Gaps = 2/253 (1%)
Strand=Plus/Plus
Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612
||| ||| || |||||| ||||| | | || | ||||||||| || ||||| || ||
Sbjct 104243 ATCGTAATGAACCATAATATCTTCTAAAGCTTTAACTAAACGACGTTGGATATACCCGGT 104302
Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672
| |||||| ||||| |||||||| | ||| ||||||||||||| |||||||| ||
Sbjct 104303 CTCTGCTGTTTTCACAGCAGTATCAATCAAACCTTCACGACCACCCATCGCATGGAAAAA 104362
Query 302673 TAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731
| ||||| || | | || | ||| || ||| | ||||||||||| | || |
Sbjct 104363 GAACTCTTGAGGAGTTAAACCTCTCAAGTAA-GAGTTTTCAACGAAACCCTTTGATTCTG 104421
Query 302732 GCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATAC 302791
| || | ||| ||| | || ||||| ||||| | | || | ||| | | ||||
Sbjct 104422 GAGAGTAGTCATCCTTAGAGAAATGTGGTAGGGTACGATCGGCAAACCCGAAAGCAATAC 104481
Query 302792 GCTTTCCATCAAC 302804
|||| || || ||
Sbjct 104482 GCTTACCTTCCAC 104494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471815714233700
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