Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq91 149 6e-31 seq1 104 2e-17 >seq91 Length=167622 Score = 149 bits (164), Expect = 6e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || ||||| ||||| |||||||| | ||||| ||| | || Sbjct 23120 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 23179 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| ||||| || ||||| || ||| Sbjct 23180 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 23239 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||||||||| || || || |||| ||| |||| |||| || || ||| Sbjct 23240 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 23299 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 || ||||||||||| || || |||||||| ||| ||||| | || || || Sbjct 23300 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGTGG 23349 >seq1 Length=4213555 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || ||||| || || || | ||||| ||| | | ||||| | || | || || Sbjct 45278 ACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCATTGACAATGTCAAGTCC 45337 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| |||||||| ||||| || || || || |||||| | ||||||||||| || || Sbjct 45338 AAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAG 45397 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || |||| || |||| |||| || || ||||| ||||||||||| || || ||| Sbjct 45398 CAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAAGGAATCCACCCTTCAC 45457 Query 24908 TTGGTGTTGCGA 24919 ||||| ||| || Sbjct 45458 TTGGTCTTGAGA 45469 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/160 (73%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 126029 TGGTCGCTTTCGCTATAGTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAtttttt 126088 |||| || |||||| |||||||| ||||||||||| ||| ||||| || || || | Sbjct 1143941 TGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTTGCTGCCATCTTCT 1143882 Query 126089 ttATAAAGACAAAGGGTATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTG 126148 | |||| |||||| | ||||| ||| | || ||| ||||| ||||||| | | Sbjct 1143881 GGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCAAACGAATTGATTTGCAGAG 1143822 Query 126149 ACGAAGGACTCCATACGGACTTTGCATGTCTG-TATTACA 126187 | ||||| | || || |||||||| ||| || |||| || Sbjct 1143821 ATGAAGGTTTGCACACCGACTTTGCCTGTTTGCTATTCCA 1143782 Score = 82.4 bits (90), Expect = 7e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 24803 GAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCG 24862 ||||| || ||||| || |||||| | ||||| ||||| || || || | || || Sbjct 1811020 GAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGACGGA 1810961 Query 24863 AGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTG 24922 |||| | || || || ||||| ||||||||||| ||||| |||||||| ||| | ||| Sbjct 1810960 AGAACTCTATCCGACTACAACATCCAAAAGGAATCCACACTCCACTTGGTCTTGAGGTTG 1810901 Query 24923 CGCGGAGG 24930 | ||||| Sbjct 1810900 AGAGGAGG 1810893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897037628000