Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq81 109 7e-19 seq86 95.1 2e-14 >seq81 Length=391803 Score = 109 bits (120), Expect = 7e-19 Identities = 179/257 (70%), Gaps = 22/257 (9%) Strand=Plus/Plus Query 162943 TCAAAGAAAGGTTATTTATGCCA----TAAGaaaaaaaTTTAGATCAAAAGGGGATTTTA 162998 ||||||||||||||| |||||| ||||| ||| || | |||| || | Sbjct 188034 TCAAAGAAAGGTTATCTATGCCTGTTTTAAGAGAAAT-TTAAAATCAGAA---------A 188083 Query 162999 TTAAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAAC 163058 | |||||||||||| || |||| |||||| | ||||| || | ||| | ||||||||| Sbjct 188084 TCAAGGTTGCTCAACTAGGTGGTTATGTTTCTGAACATACCGGATATCATCACGGTGAAG 188143 Query 163059 AAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAG 163118 ||| | |||| || || || |||||||||||||||||| | || ||||| Sbjct 188144 CTTCCCTATATCAAACGATTGTTGGTTTAGCCCAAGATTTTGTTGGTTCTAACAATAT-- 188201 Query 163119 CATTACTTG----AACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCT 163174 ||||||| | ||| ||||| || ||||||||| || ||||||||||| Sbjct 188202 --TTACTTGTTGAAGCCTAATGGTGCTTTCGGTACCAGAGCTACTGGTGGTAAAGATTCA 188259 Query 163175 GCGGCATCAAGATATAT 163191 || || | |||||||| Sbjct 188260 GCTGCTCCGAGATATAT 188276 >seq86 Length=766785 Score = 95.1 bits (104), Expect = 2e-14 Identities = 234/350 (67%), Gaps = 9/350 (3%) Strand=Plus/Plus Query 168459 TTTGATTTAAGTGGTGGAACTATCCCACTTCTTACTACCaaaaaaaTTGTATACAC---T 168515 |||||||| |||| || | | |||||||| |||||||| ||| || | || | Sbjct 578482 TTTGATTTGAGTGATGATAAATTTCCACTTCTAACTACCAAGAAAGTTTTCACCAAGGGT 578541 Query 168516 AACATTCTTAAAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAAT 168575 | |||||| || ||||||||| |||| || | |||||| || || | | Sbjct 578542 ATTATTCTT---GAGCTTTTATGGTTTATTTCTGGCTGTACTGATGGTAAGAAACTCTCT 578598 Query 168576 GATATAGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGT 168635 ||| |||||| || | ||| | | || || || ||||| | || || | | || Sbjct 578599 GATCAAGGTGTGAAGATCTGGGAAGGGAACGGATCCCGTGAGTACTTGGACTCCTTGGGA 578658 Query 168636 TTTACCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCA 168695 |||| || ||| || |||||||| || ||| ||||||| || |||||||||||| Sbjct 578659 CTTACAGATAGACGTGAGGGTGATTTGGGACCAGTTTATGGGTTCCAATGGAGACATTTC 578718 Query 168696 GGAGCTCAATATATTGAC-TGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAG 168754 ||||| |||| | ||| ||||| ||||| | |||||||| || || || ||||| Sbjct 578719 GGAGCAGAATACA-AGACATGTGACGATGATTATTCGGGACAAGGTGTTGATCAGTTAAG 578777 Query 168755 TCAAACTATAAATACTTTACACAACAATCCGGAAAATAGAA-GAATATTA 168803 | || ||| || | |||||||| | |||||| || ||||| Sbjct 578778 CGATGTGATTCATAAGTTGAAGAACAATCCTTACGATAGAAGGATTATTA 578827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635176806028000