Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq1 123 2e-23
>seq1
Length=4213555
Score = 123 bits (136), Expect = 2e-23
Identities = 297/436 (68%), Gaps = 15/436 (3%)
Strand=Plus/Minus
Query 50280 GCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCA 50339
|| ||| | || || ||||| || || |||||||||||||| || ||| ||||||
Sbjct 1143951 GCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTTGCT 1143892
Query 50340 GCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTG 50399
||||| || | | || | || | ||||| || | || || ||||| |||
Sbjct 1143891 GCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCAAACGAATTG 1143832
Query 50400 ATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGCGTA 50459
|||| | || ||||| ||||||| |||||||| |||||| | | || | |
Sbjct 1143831 ATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTGTTTGCTATTCCAT---CATTTG 1143775
Query 50460 AATGAAAAATTATCATACGAAACAATTTTGGAC--ATGTTCAAAGAAGCCGTCGACATCG 50517
|| ||| || || | ||| | | | | | || ||| |||||| || || ||||
Sbjct 1143774 AA-GAACAAGCCAGATCC-AAAGATTGTCGAAAGAATCATCACAGAAGCTGTTGAGATCG 1143717
Query 50518 AAAAAGAGTTT-TTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATG 50576
|||| ||| | |||| |||||| ||||||| | | ||||| |||||||| || ||
Sbjct 1143716 AAAA-GAGATACTTCATCGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTG 1143658
Query 50577 ATGTGCGAGTACATTGAGTTTGTTGCAGACAGA-TTGTTGTTGCAGCTGG-GACAACCGA 50634
||| | | ||| | || ||||||||||||||| | | ||||| || |||| ||
Sbjct 1143657 ATGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTAGGTAACAA--GA 1143600
Query 50635 AATACTATAATG-CACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAA 50693
||||||| || | ||| |||||| || |||||| | ||||| || |||| || |||
Sbjct 1143599 AATACTACAACGTCAC-TAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAA 1143541
Query 50694 ACAAACTTTTTCGAAA 50709
|| || || |||||||
Sbjct 1143540 ACCAATTTCTTCGAAA 1143525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488543389320000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |