Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq83 172 1e-37
seq88 127 5e-24
seq1 127 5e-24
seq99 111 4e-19
seq81 96.9 8e-15
seq80 91.5 3e-13
>seq83
Length=768430
Score = 172 bits (190), Expect = 1e-37
Identities = 332/484 (69%), Gaps = 7/484 (1%)
Strand=Plus/Plus
Query 110514 TTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCT 110573
||| | || ||||||||| | | || | || || |||||||| ||||||||| | ||
Sbjct 95577 TTGTCATCATGCTTTCTTGTGGCTATGGAAGAAGACTCTATTGATGGTATTTATAAGACT 95636
Query 110574 CTTAAAGAA-ACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGT-TCATG 110631
||| | || |||||| | || || || ||||| || ||||| || || || |||
Sbjct 95637 -TTACACAAGACTGCTTTGATATCAAAGGCATCTGGTGGTATTGGAATACATGTGTCAA- 95694
Query 110632 ATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTC 110691
|||| | |||| || || ||||| || |||| ||| |||||| ||| | ||||
Sbjct 95695 ATATAAGGGCAAATGGTGCTTATATCTCAGGGTCGAATGGTACTTCAAATGGTTTAGTTC 95754
Query 110692 CAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAA-- 110749
| ||| | | || || ||| |||| |||| |||||| |||||||||| || | |
Sbjct 95755 CTATGCTGCGGGTTTTTAACAACACAGCAAGATATGTCGATCAAGGTGGGAACAAACGCC 95814
Query 110750 -TGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAAC 110808
||| | ||| ||| || | ||||| |||||| ||||| |||| |||||| |||
Sbjct 95815 CTGGTGCCTTTTGTATATACTTGGAACCATGGCATGGGGATATTATTGACTTCTTACAAC 95874
Query 110809 TTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGA 110868
| | || ||||| ||| |||||| || || || || ||||||||||| | ||||
Sbjct 95875 TAAGAAAGAATCACGGAAAAGAAGAAATGAGGGCCCGAGACTTATTTTATGCTCTATGGA 95934
Query 110869 TTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTC 110928
|| | ||| | || ||| |||||||| || | |||| ||||| || | ||||
Sbjct 95935 TTCCGGATCTTTTTATGCAACGTGTTGAAAATAATGAAGATTGGTCCATTTTTAGTCCAG 95994
Query 110929 ATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAAT 110988
|| | | ||| ||||||| ||||| | |||||| || ||| || ||||| |
Sbjct 95995 ATGAAGCAACAGGTTTATCTGACTGCTATGGTACAGAGTTCAAAACCCTATATGAAAAGT 96054
Query 110989 ATGA 110992
||||
Sbjct 96055 ATGA 96058
>seq88
Length=341902
Score = 127 bits (140), Expect = 5e-24
Identities = 384/590 (65%), Gaps = 5/590 (1%)
Strand=Plus/Plus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361
|||| || |||||||| || | |||||| |||| || || | |||| || || |
Sbjct 13041 ACTACTTCGGTTTCAAGACCTTGGAACGTTCTTACTTGCTAAGAATCAACGGTAAGGTTG 13100
Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421
||||||||||||||||||| | | | || || | ||||| || || ||||||
Sbjct 13101 CTGAACGTCCTCAACACATGATCATGAGAGTGGCTGTCGGTATCCACGGTAGAGATATTG 13160
Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTACTCCT 110480
|| ||| | ||| ||| | || | | || || | | | || ||| | |||
Sbjct 13161 AAAAGGTTTTGGAAACTTACAACCTAATGTCTCTAA-GATACTTCACACACGCTTCGCCT 13219
Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540
|| || || || || || ||| | |||| || | || || || || | | ||
Sbjct 13220 ACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCCATG 13279
Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600
|| || ||||| |||||||||||||| || || | || ||| ||| | || |||||
Sbjct 13280 AAGGAAGATTCCATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCTAAG 13339
Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660
| | |||| || |||||| | ||| |||| | ||||| || | || | | || ||
Sbjct 13340 ACCGCTGGTGGTATTGGTTTGCACATTCACAACATTCGTTCTACCGGTTCTTACATTGCT 13399
Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720
| || ||| |||| | || || |||||||| | | || |||||| |||||||
Sbjct 13400 GGTACTAACGGTACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCC 13459
Query 110721 AAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCT 110777
|| || | ||||||||| |||||| ||| | || || | || |||| ||
Sbjct 13460 CGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAGCCA 13519
Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837
||||| |||||||| || || ||| | || | | || || || || ||||||
Sbjct 13520 TGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGAAGAAATC 13579
Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAA 110887
| ||| | || || || ||| | ||||| ||||| | ||||||||
Sbjct 13580 CGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAA 13629
>seq1
Length=4213555
Score = 127 bits (140), Expect = 5e-24
Identities = 384/590 (65%), Gaps = 5/590 (1%)
Strand=Plus/Minus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361
|||| || |||||||| || | |||||| |||| || || | |||| || || |
Sbjct 3210640 ACTACTTCGGTTTCAAGACCTTGGAACGTTCTTACTTGCTAAGAATCAACGGTAAGGTTG 3210581
Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421
||||||||||||||||||| | | | || || | ||||| || || ||||||
Sbjct 3210580 CTGAACGTCCTCAACACATGATCATGAGAGTGGCTGTCGGTATCCACGGTAGAGATATTG 3210521
Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTACTCCT 110480
|| ||| | ||| ||| | || | | || || | | | || ||| | |||
Sbjct 3210520 AAAAGGTTTTGGAAACTTACAACCTAATGTCTCTAA-GATACTTCACACACGCTTCGCCT 3210462
Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540
|| || || || || || ||| | |||| || | || || || || | | ||
Sbjct 3210461 ACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCCATG 3210402
Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600
|| || ||||| |||||||||||||| || || | || ||| ||| | || |||||
Sbjct 3210401 AAGGAAGATTCCATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCTAAG 3210342
Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660
| | |||| || |||||| | ||| |||| | ||||| || | || | | || ||
Sbjct 3210341 ACCGCTGGTGGTATTGGTTTGCACATTCACAACATTCGTTCTACCGGTTCTTACATTGCT 3210282
Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720
| || ||| |||| | || || |||||||| | | || |||||| |||||||
Sbjct 3210281 GGTACTAACGGTACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCC 3210222
Query 110721 AAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCT 110777
|| || | ||||||||| |||||| ||| | || || | || |||| ||
Sbjct 3210221 CGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAGCCA 3210162
Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837
||||| |||||||| || || ||| | || | | || || || || ||||||
Sbjct 3210161 TGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGAAGAAATC 3210102
Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAA 110887
| ||| | || || || ||| | ||||| ||||| | ||||||||
Sbjct 3210101 CGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAA 3210052
>seq99
Length=875967
Score = 111 bits (122), Expect = 4e-19
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 167642 ATCGATGAAACTTTTCCAGATTTTTATCGAACCACGTCGTTTGCATTCATCGTAAAAACC 167701
|||||||||| | ||||||||||| || || |||| ||| ||||| || ||||| ||
Sbjct 68136 ATCGATGAAAGTCTTCCAGATTTTGATATTACACCGTCTTTTACATTCGTCATAAAAGCC 68077
Query 167702 ATAGTCTCTTGAGATATCAGCACATTCGTGATTTCCTCTTAATAAAATTATGTTATTTNN 167761
|| |||| | | || ||||||||| ||||| ||||| || | || | ||| | |
Sbjct 68076 GTAAACTCTCGTAACATTAGCACATTCATGATTCCCTCTCAAAAGAAAAAAGTTCTCTGG 68017
Query 167762 NNNNNNNNNNNTGTAGCAAAATAATAACAAAATTGTTTCTAATGATTTAACACCTCTATC 167821
| || |||| | | || ||||||||||||||||| |||||||||
Sbjct 68016 ATATTTGATCTTATAACAAAGAAGAAGCAGAATTGTTTCTAATGATTGCTTACCTCTATC 67957
Query 167822 AACATAATCACCTAAAAATATATATTT 167848
|| || ||||||||||||| ||| ||
Sbjct 67956 CACGTAGTCACCTAAAAATAGATAATT 67930
>seq81
Length=391803
Score = 96.9 bits (106), Expect = 8e-15
Identities = 144/203 (71%), Gaps = 6/203 (3%)
Strand=Plus/Plus
Query 279857 TCTATTCCTCATTTAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGT 279916
||||||||| || | ||||| || |||||| || | ||| |||| | |||
Sbjct 187999 TCTATTCCTTCCGTATTAGATGGGTTAAAACCTGGTCAAAGAAAGGTTATCTATGCCTGT 188058
Query 279917 TTCAAAAGAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAA 279976
|| || ||||| || | ||||| |||||||| ||| ||||||||||| |||
Sbjct 188059 TTTAAGAGAAATTTAAAATCAGAAATCAAGGTTGCTCAACTAGGTGGTTATGTTTCTGAA 188118
Query 279977 CATGCAGGTTATCATCACGGTGAAGCGTCTCT---TCAAGGTGCTATTGTAGGTCTTGCC 280033
||| | || ||||||||||||||||| || || |||| | ||||| ||| | |||
Sbjct 188119 CATACCGGATATCATCACGGTGAAGCTTCCCTATATCAA---ACGATTGTTGGTTTAGCC 188175
Query 280034 CAAGATTTTATGGCTTCAAACAA 280056
||||||||| | | ||| |||||
Sbjct 188176 CAAGATTTTGTTGGTTCTAACAA 188198
>seq80
Length=309313
Score = 91.5 bits (100), Expect = 3e-13
Identities = 126/173 (73%), Gaps = 4/173 (2%)
Strand=Plus/Minus
Query 305317 TGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGC 305376
||| |||||| ||| | |||||| | |||||||| || || || ||||||||||||||
Sbjct 105491 TGATAATGATCCCGTTTTATTCAATCGTCAACCATCCCTTCACAAGATGTCTATGATGGC 105432
Query 305377 TCATAAAGTCAAAGTATTAT-CTGGATTG-ACATTTCGATTAAATGTAAGTGCTTGTACG 305434
|| | ||| || || ||| | | ||| || || | ||||| | || | |
Sbjct 105431 ACACAGAGTTAAGGT--TATGCCGTATTCTACCTTCAGGCTAAATTTGTCTGTTACATCC 105374
Query 305435 CCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487
||||||||||| ||||||||||| || ||||||||| | || || || |||||
Sbjct 105373 CCTTATAATGCAGATTTTGATGGTGACGAAATGAATTTACACGTTCCACAATC 105321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186811279396100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |