Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 4e-32
>seq1
Length=4213555
Score = 152 bits (168), Expect = 4e-32
Identities = 303/441 (69%), Gaps = 12/441 (3%)
Strand=Plus/Minus
Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407
|| || ||| | | ||| || || ||| ||| ||||||||||| || ||| || | ||
Sbjct 408111 GGTCTCTTGTTGTTTGGTCCTCCAGGTACTGGTAAAACATTAATCGCAAGAAAAATCGGT 408052
Query 19408 AAATTACTTACAAAACAACCTCCCAAA-ATTGTAAATGGTCCTGAAATCTTAAATAAATA 19466
| | | | | | ||| ||||| ||||| || ||||| |||||| | | ||||||
Sbjct 408051 ACAATGTTGA-ATGCCAAAGAGCCAAAGATTGTTAACGGTCCAGAAATCCTCAGTAAATA 407993
Query 19467 TGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAA 19526
||| || || ||||||||| | || ||||| || ||||| | |||| | ||
Sbjct 407992 TGTCGGCTCTTCAGAAGAAAATATCCGTAACTTGTTCAAGGATGCTGAGGCAGAATATAA 407933
Query 19527 ACGTTTAGGGCGCAAAAG-TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCT 19585
| | |||| | | || ||| ||||||||||| || | ||||||||||| | | |
Sbjct 407932 A-GCCAAGGGTGAAGAATCTTCATTGCACATTATCATTTTCGATGAATTGGATTCTGTAT 407874
Query 19586 GTAAGCAAAGAGGTTC---TGGT----GTAAATGGAGTACATGACACTGTTGTCAATCAA 19638
|||||||||||||| ||| ||| | || || |||| ||| || || |||
Sbjct 407873 TCAAGCAAAGAGGTTCAAGAGGTGACGGTACA-GGCGTTGGAGACAATGTGGTTAACCAA 407815
Query 19639 CTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACT 19698
| || | || | || |||||| ||||| | || ||||| || |||||||| ||||||
Sbjct 407814 TTGCTTGCTAAGATGGATGGTGTTGACCAATTAAACAATATATTGGTTATTGGTATGACT 407755
Query 19699 AATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATC 19758
|| | ||| || || || || ||||| ||||| || ||| | || ||| | || ||
Sbjct 407754 AACCGTAAGGATTTGATTGATAGTGCCTTGTTACGTCCTGGTAGATTTGAAGTCCAGGTC 407695
Query 19759 GAAATTAACTTACCCGATGAA 19779
|||||| | ||||| || |||
Sbjct 407694 GAAATTCAATTACCAGACGAA 407674
Score = 113 bits (124), Expect = 4e-20
Identities = 559/866 (65%), Gaps = 38/866 (4%)
Strand=Plus/Minus
Query 43709 TTTCCAATTCAA-TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTG 43767
||||| | |||| || || || || ||| | || || | ||| |||| || |||||
Sbjct 1144372 TTTCCCAATCAAGTACCACGAAATCTGGGAGGCTTATAAGAGAGCCGAGGCCTCTTTTTG 1144313
Query 43768 GACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCAC-ATTGGATTGCATTAAAACCA 43825
||| || |||||| | |||||| | || || ||| || | |||| || | || |
Sbjct 1144312 GACTGCTGAAGAAATCGATTTGTCCAAGGATCTT--CATGACTGGAA--CAACAGAATGA 1144257
Query 43826 -CAAGAA--AAACATTTTATATCTTTGGTTT--TGGCGTTTTTTGCTGCGAGCGACGGGA 43880
| |||| | | ||||| |||| | | | ||||| |||||||| ||| || |
Sbjct 1144256 ACGAGAACGAGAGATTTTTCATCTCCAGAGTGCTTGCGTTCTTTGCTGCTTCCGATGGTA 1144197
Query 43881 TAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGAT 43940
| || || ||||| ||||| || | || || ||| | |||||||| |
Sbjct 1144196 TCGTGAACGAAAACTTGGTGGAAAACTTCTCTGCTGAGGTGCAAATTCCAGAAGCCAAGT 1144137
Query 43941 GTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGA 44000
|||| || || || |||||| || ||||| || || || |||| || | |||
Sbjct 1144136 GTTTCTACGGTTTCCAAATTATGATGGAAAACATCCACTCCGAAACTTATTCGTTGTTGA 1144077
Query 44001 TAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056
| || || |||||||| ||| || || ||| || ||||| ||||| || |||
Sbjct 1144076 TTGACACTTACATCAAGGATCCTAAGGAACACGAAT--TC--TTGTTGAATGCCATTGAA 1144021
Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGAT 44116
|| | || || ||| | || || | |||||| ||| |||||| | | ||
Sbjct 1144020 ACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGATGGATTCGTGATGACGAA 1143961
Query 44117 TCTTTT---GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173
| | | ||| || | || ||||| || | |||||||| | || || || ||
Sbjct 1143960 GCCCTATACGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGT 1143901
Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233
|| ||||| ||||| || ||||| ||||| ||||||||||| || ||||| || |||
Sbjct 1143900 TCCTTTGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCA 1143841
Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293
|| || || || | | |||||||| || || ||| ||||| || ||| || || |
Sbjct 1143840 AACGAATTGATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTGTTTGCTA-TTCCA 1143782
Query 44294 TATCTAGGAGACGATAAGCC---TTCATGTAAGACAAT-TACAGATATTGTTGTAGAGGC 44349
| | | ||| | ||||| | || |||| | | ||| || | ||| ||
Sbjct 1143781 TCATTTGAAGA--ACAAGCCAGATCCA---AAGATTGTCGAAAGA-ATCATCACAGAAGC 1143728
Query 44350 AGTAAAGATAGAACAAGA-ATTTATGA-CAACAGCATTACCTGTAAATTTAATAGGAATG 44407
|| |||| ||| |||| || | | | || || |||| || | || | || |||
Sbjct 1143727 TGTTGAGATCGAA-AAGAGATACTTCATCGAC-GCTCTACCCGTTTCTCTATTGGGTATG 1143670
Query 44408 AATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTG 44467
|| | ||||||||||||||| | |||| ||||||| | |||| | | |
Sbjct 1143669 AACGCTGATTTGATGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTA 1143610
Query 44468 GGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTG 44527
||| | | ||| |||| | || ||||| || || ||||||||||| ||||| |||
Sbjct 1143609 GGTAACAAGAAATACTACAACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTG 1143550
Query 44528 GAAGGCAAAACAAACTTTTTTGAAAA 44553
| || ||||| || || || |||||
Sbjct 1143549 GCCGGTAAAACCAATTTCTTCGAAAA 1143524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455515600500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |