Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq88 316 3e-81 seq1 316 3e-81 >seq88 Length=341902 Score = 316 bits (350), Expect = 3e-81 Identities = 922/1399 (66%), Gaps = 43/1399 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||| | |||||||| || || || || || | |||||||||||| | || || Sbjct 14500 GTACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTAGA 14441 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || ||||||||||| || | ||| | | ||| | ||||| | | |||||| | Sbjct 14440 AGCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGC 14381 Query 110827 CTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTT-TCACCTTCCCACATGTCAAACTG 110883 ||| | |||||| || ||| | || | || | | ||| ||| | || || || Sbjct 14380 CTTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTCTTACC---CCATAGATCGAATTG 14324 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 | | |||| || || ||||| || || | |||||| | ||||| | | || Sbjct 14323 TAACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGC 14264 Query 110944 CAATTCACAGCTCGCCTC-CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002 |||||| | || || || | | | || || || ||||||||||| | | |||| Sbjct 14263 CAATTCCATGGAGGCTTCACAAGCAC-CATGGTAGATAGTTTCAAAGATTTGGACGTTCA 14205 Query 111003 -TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061 |||| ||| |||| || || ||||||| | || || || || | || || | | Sbjct 14204 ATCTCTTTG-CTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAA 14146 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121 |||||||||||||| |||||||||| |||| ||| || || ||| ||||| ||||| Sbjct 14145 CCTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACT 14086 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 |||||| | || | |||||||| || ||| | || || | || ||| | ||| || Sbjct 14085 GGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCG 14026 Query 111182 TG-AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT----TGACAT--------ACTT 111228 || || || || | | | | || |||||| ||| ||| || || Sbjct 14025 TGCAACTTCTTGA-AGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGC 13967 Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288 ||| | ||||| || ||||| || |||||||| || || || | | ||| || | Sbjct 13966 TGGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAAC 13907 Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348 ||||| ||| ||||| ||| ||| || || ||||| |||||||| ||||||||||| Sbjct 13906 GATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTT 13847 Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408 ||| || ||||||||||| |||||| | || || || || || || || | || | || Sbjct 13846 GTTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGAT 13787 Query 111409 AGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACT 111467 ||| | ||| ||| | | | || | ||| | | | || || || |||||| Sbjct 13786 AGCGTACCACAACTTTTGAGCCTTG-ACAGTCTTTCTACCACGGCCTTCTCTCTCGTAAC 13728 Query 111468 TTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTG 111527 | ||| | |||||||| || ||||| | || | | |||||||| | || || Sbjct 13727 GTTCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTG 13668 Query 111528 GACAGAAAAGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || |||| | || ||| | | | ||| ||| || | |||||||||||| ||||| || Sbjct 13667 GAGAGAACAAAGTCCAAT--CTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGAT 13610 Query 111586 CCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 111644 ||| || | || || | |||| | ||| || ||||| | ||| ||||| || | Sbjct 13609 CCATAGTGCTGGGAACAAGTCTCTTGCACGGA-TTTCTTCCTTACCGTGGTTCTTTCTGA 13551 Query 111645 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAG 111698 || | ||| || | |||||| | |||||||||||| | || | |||| || Sbjct 13550 TGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAG 13491 Query 111699 ATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758 || ||| | ||| |||| | || || || || ||| ||| || || |||| || Sbjct 13490 GTCTCTTGTTA---CCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCA 13434 Query 111759 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 111818 ||||||||||||| | || ||| || || || ||| ||| | | | | Sbjct 13433 TTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAA 13374 Query 111819 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878 | || ||||||| |||||||| ||||| ||| ||||| ||||| ||| | | Sbjct 13373 TGTTGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCA 13314 Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938 ||| | || ||||| | || || || ||||| |||| | ||||| || |||| Sbjct 13313 AAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACA 13254 Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT 111998 | || || || |||||||||||||| || || || | ||||| |||| || ||| Sbjct 13253 TTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAA-GTATCTT 13195 Query 111999 -GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057 | ||||| || ||| || ||||| || ||||| ||| |||||||| |||| Sbjct 13194 AGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACA 13135 Query 112058 GCGACCCGCATGAACATGT 112076 || || | ||||| ||||| Sbjct 13134 GCCACTCTCATGATCATGT 13116 >seq1 Length=4213555 Score = 316 bits (350), Expect = 3e-81 Identities = 922/1399 (66%), Gaps = 43/1399 (3%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||| | |||||||| || || || || || | |||||||||||| | || || Sbjct 3209181 GTACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTAGA 3209240 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || ||||||||||| || | ||| | | ||| | ||||| | | |||||| | Sbjct 3209241 AGCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGC 3209300 Query 110827 CTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTT-TCACCTTCCCACATGTCAAACTG 110883 ||| | |||||| || ||| | || | || | | ||| ||| | || || || Sbjct 3209301 CTTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTCTTACC---CCATAGATCGAATTG 3209357 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 | | |||| || || ||||| || || | |||||| | ||||| | | || Sbjct 3209358 TAACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGC 3209417 Query 110944 CAATTCACAGCTCGCCTC-CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002 |||||| | || || || | | | || || || ||||||||||| | | |||| Sbjct 3209418 CAATTCCATGGAGGCTTCACAAGCAC-CATGGTAGATAGTTTCAAAGATTTGGACGTTCA 3209476 Query 111003 -TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061 |||| ||| |||| || || ||||||| | || || || || | || || | | Sbjct 3209477 ATCTCTTTG-CTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAA 3209535 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121 |||||||||||||| |||||||||| |||| ||| || || ||| ||||| ||||| Sbjct 3209536 CCTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACT 3209595 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 |||||| | || | |||||||| || ||| | || || | || ||| | ||| || Sbjct 3209596 GGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCG 3209655 Query 111182 TG-AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT----TGACAT--------ACTT 111228 || || || || | | | | || |||||| ||| ||| || || Sbjct 3209656 TGCAACTTCTTGA-AGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGC 3209714 Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288 ||| | ||||| || ||||| || |||||||| || || || | | ||| || | Sbjct 3209715 TGGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAAC 3209774 Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348 ||||| ||| ||||| ||| ||| || || ||||| |||||||| ||||||||||| Sbjct 3209775 GATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTT 3209834 Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408 ||| || ||||||||||| |||||| | || || || || || || || | || | || Sbjct 3209835 GTTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGAT 3209894 Query 111409 AGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACT 111467 ||| | ||| ||| | | | || | ||| | | | || || || |||||| Sbjct 3209895 AGCGTACCACAACTTTTGAGCCTTG-ACAGTCTTTCTACCACGGCCTTCTCTCTCGTAAC 3209953 Query 111468 TTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTG 111527 | ||| | |||||||| || ||||| | || | | |||||||| | || || Sbjct 3209954 GTTCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTG 3210013 Query 111528 GACAGAAAAGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || |||| | || ||| | | | ||| ||| || | |||||||||||| ||||| || Sbjct 3210014 GAGAGAACAAAGTCCAAT--CTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGAT 3210071 Query 111586 CCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 111644 ||| || | || || | |||| | ||| || ||||| | ||| ||||| || | Sbjct 3210072 CCATAGTGCTGGGAACAAGTCTCTTGCACGGA-TTTCTTCCTTACCGTGGTTCTTTCTGA 3210130 Query 111645 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAG 111698 || | ||| || | |||||| | |||||||||||| | || | |||| || Sbjct 3210131 TGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAG 3210190 Query 111699 ATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758 || ||| | ||| |||| | || || || || ||| ||| || || |||| || Sbjct 3210191 GTCTCTTGTTA---CCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCA 3210247 Query 111759 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 111818 ||||||||||||| | || ||| || || || ||| ||| | | | | Sbjct 3210248 TTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAA 3210307 Query 111819 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878 | || ||||||| |||||||| ||||| ||| ||||| ||||| ||| | | Sbjct 3210308 TGTTGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCA 3210367 Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938 ||| | || ||||| | || || || ||||| |||| | ||||| || |||| Sbjct 3210368 AAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACA 3210427 Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT 111998 | || || || |||||||||||||| || || || | ||||| |||| || ||| Sbjct 3210428 TTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAA-GTATCTT 3210486 Query 111999 -GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057 | ||||| || ||| || ||||| || ||||| ||| |||||||| |||| Sbjct 3210487 AGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACA 3210546 Query 112058 GCGACCCGCATGAACATGT 112076 || || | ||||| ||||| Sbjct 3210547 GCCACTCTCATGATCATGT 3210565 Score = 111 bits (122), Expect = 2e-19 Identities = 352/530 (66%), Gaps = 23/530 (4%) Strand=Plus/Plus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| | ||| ||||||| | |||| | ||| ||||||||| | ||| Sbjct 1143796 GGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACC 1143855 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGA 122776 |||||| | |||| |||||||||||| | || || ||| || || || ||||| || | Sbjct 1143856 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCA-AAGGAACCAGAGAAAAACA 1143914 Query 122777 TACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATC- 122834 ||| ||||| || ||||||| | | ||| ||| | || | ||| | |||| Sbjct 1143915 CACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTA-TAG---GGCTTCGTCATCA 1143970 Query 122835 --AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC- 122891 || |||| | || ||||||| ||||| | | || ||| | |||| ||||| Sbjct 1143971 CGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCA 1144030 Query 122892 TTCA--AATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAA 122949 |||| || || | | | | || |||||| ||||| |||||||||| ||| Sbjct 1144031 TTCAACAAGAATTCGTGTTCCTTAG---GATCCTTGATGTAAGTGTCAATCAACAACGAA 1144087 Query 122950 TATGTTTCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTC 123008 || |||||| || | ||| ||| || ||| | ||||||| | ||||| Sbjct 1144088 TAAGTTTCGGAGTGGATGTTTTCCATCAT-AATTTGGAAACCGTAGAAACACTTGGCTTC 1144146 Query 123009 GCTTATCTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGA 123068 || || |||||| | | || || | | || || || || |||||||| Sbjct 1144147 TGGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGA 1144206 Query 123069 CCCAGCAAAGAATGCCAGGA---TGTACTTTATGAATTTCT-TTTCATTTTCATTCAGGG 123124 |||||||||| || || | || | | | ||| ||| ||| ||||||| | Sbjct 1144207 AGCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTC-TGT 1144265 Query 123125 TCTTCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCAA 123174 | |||||||| | |||||| ||||||||||| | |||||| ||||||||| Sbjct 1144266 TGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAA 1144315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031214960000