Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq88 212 8e-50 seq1 212 8e-50 >seq88 Length=341902 Score = 212 bits (234), Expect = 8e-50 Identities = 892/1398 (64%), Gaps = 29/1398 (2%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || || |||| ||||||||||| || ||||| |||| |||||||||||||| ||| || Sbjct 14499 TACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTAGAA 14440 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || || ||||| || || | | | ||| | ||||| | || | | || || Sbjct 14439 GCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGCC 14380 Query 118302 TTGAGAGCGTCCCAGTCG--TAGTTGAGCTTTG-TCTCCCCCTGCCACATATCAAACTGG 118358 || | ||||| || ||| | || | | ||| ||| || | ||| || || Sbjct 14379 TTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTCTTACCC---CATAGATCGAATTGT 14323 Query 118359 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 118418 | |||||| || ||||| || || || | |||||||| || || ||| ||| Sbjct 14322 AACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGCC 14263 Query 118419 AATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475 ||||| |||| || || || | || || || |||||||| || | | ||| Sbjct 14262 AATTCCATGGAG---GCTTCACAAGCACCATGGTAGATAGTTTCAAAGATTTGGACGTTC 14206 Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535 | | ||| || || || || ||||| | | || || || || | || || | | Sbjct 14205 AATCTCTTTGCTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAA 14146 Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACG 118595 ||||| ||||| | |||| || | ||||||||| || || | | ||| || || || Sbjct 14145 CCTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACT 14086 Query 118596 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 118655 |||||| | || | || || | || || | || || | |||||| | ||| || Sbjct 14085 GGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCG 14026 Query 118656 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC--ATACTT--AGGAAGG-- 118709 || | ||| | | | | | | |||||| ||| | ||| || | ||| | Sbjct 14025 TGCAACTTCTTGAAGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGCT 13966 Query 118710 ------GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 ||||| || |||| ||||| |||| ||| || || | || ||| || | Sbjct 13965 GGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACG 13906 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 ||||| |||||||| ||| ||| || || ||||||||||||||||| ||| || Sbjct 13905 ATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTG 13846 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 ||||| ||||||||||| |||||| |||| || || || || ||||| | | | ||| Sbjct 13845 TTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATA 13786 Query 118884 GCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTT 118943 || | ||| | | ||| ||||| | | || || ||| |||||| | Sbjct 13785 GCGTACCACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGT 13726 Query 118944 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 119003 ||| | |||||||| || ||||| | |||| | |||||||| | | ||| Sbjct 13725 TCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGA 13666 Query 119004 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 119063 |||| | || ||| | | || ||| || | ||||||||| || ||||||||||| Sbjct 13665 GAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCAT 13606 Query 119064 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 119123 || || | ||| | || | || |||||| | || || || | | || Sbjct 13605 AGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCG 13546 Query 119124 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACG 119182 | ||||| | |||||| | |||||| || || | ||||| |||| | ||| | Sbjct 13545 ACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTC 13486 Query 119183 ACG--ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATG 119240 | |||| | |||| || || | |||||| ||| || ||||||| ||||||||| Sbjct 13485 TTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATA 13426 Query 119241 ATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGG 119300 ||||| | || || || || || ||| ||| | | | | | ||| Sbjct 13425 ATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGA 13366 Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360 ||||||| ||||||||| || || ||| ||||| || || ||| | | | || || Sbjct 13365 ATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCG 13306 Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420 || || || || || || || |||| | || | ||||| || |||||||| || Sbjct 13305 TAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGA 13246 Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTT-GGGACAT 119479 || |||||||| ||||| || || || | ||||| |||| || ||| | ||||| Sbjct 13245 TGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAA-GTATCTTAGAGACAT 13187 Query 119480 CTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 119539 || ||| || ||||| || ||| ||| ||||| ||||||| | || | Sbjct 13186 TAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCT 13127 Query 119540 CATAAACATGTATTGGGG 119557 ||| | ||||| ||| || Sbjct 13126 CATGATCATGTGTTGAGG 13109 >seq1 Length=4213555 Score = 212 bits (234), Expect = 8e-50 Identities = 892/1398 (64%), Gaps = 29/1398 (2%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || || |||| ||||||||||| || ||||| |||| |||||||||||||| ||| || Sbjct 3209182 TACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTAGAA 3209241 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || || ||||| || || | | | ||| | ||||| | || | | || || Sbjct 3209242 GCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGCC 3209301 Query 118302 TTGAGAGCGTCCCAGTCG--TAGTTGAGCTTTG-TCTCCCCCTGCCACATATCAAACTGG 118358 || | ||||| || ||| | || | | ||| ||| || | ||| || || Sbjct 3209302 TTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTCTTACCC---CATAGATCGAATTGT 3209358 Query 118359 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 118418 | |||||| || ||||| || || || | |||||||| || || ||| ||| Sbjct 3209359 AACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGCC 3209418 Query 118419 AATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475 ||||| |||| || || || | || || || |||||||| || | | ||| Sbjct 3209419 AATTCCATGGAG---GCTTCACAAGCACCATGGTAGATAGTTTCAAAGATTTGGACGTTC 3209475 Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535 | | ||| || || || || ||||| | | || || || || | || || | | Sbjct 3209476 AATCTCTTTGCTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAA 3209535 Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACG 118595 ||||| ||||| | |||| || | ||||||||| || || | | ||| || || || Sbjct 3209536 CCTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACT 3209595 Query 118596 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 118655 |||||| | || | || || | || || | || || | |||||| | ||| || Sbjct 3209596 GGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCG 3209655 Query 118656 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC--ATACTT--AGGAAGG-- 118709 || | ||| | | | | | | |||||| ||| | ||| || | ||| | Sbjct 3209656 TGCAACTTCTTGAAGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGCT 3209715 Query 118710 ------GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 ||||| || |||| ||||| |||| ||| || || | || ||| || | Sbjct 3209716 GGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACG 3209775 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 ||||| |||||||| ||| ||| || || ||||||||||||||||| ||| || Sbjct 3209776 ATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTG 3209835 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 ||||| ||||||||||| |||||| |||| || || || || ||||| | | | ||| Sbjct 3209836 TTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATA 3209895 Query 118884 GCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTT 118943 || | ||| | | ||| ||||| | | || || ||| |||||| | Sbjct 3209896 GCGTACCACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGT 3209955 Query 118944 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 119003 ||| | |||||||| || ||||| | |||| | |||||||| | | ||| Sbjct 3209956 TCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGA 3210015 Query 119004 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 119063 |||| | || ||| | | || ||| || | ||||||||| || ||||||||||| Sbjct 3210016 GAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCAT 3210075 Query 119064 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 119123 || || | ||| | || | || |||||| | || || || | | || Sbjct 3210076 AGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCG 3210135 Query 119124 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACG 119182 | ||||| | |||||| | |||||| || || | ||||| |||| | ||| | Sbjct 3210136 ACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTC 3210195 Query 119183 ACG--ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATG 119240 | |||| | |||| || || | |||||| ||| || ||||||| ||||||||| Sbjct 3210196 TTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATA 3210255 Query 119241 ATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGG 119300 ||||| | || || || || || ||| ||| | | | | | ||| Sbjct 3210256 ATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGA 3210315 Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360 ||||||| ||||||||| || || ||| ||||| || || ||| | | | || || Sbjct 3210316 ATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCG 3210375 Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420 || || || || || || || |||| | || | ||||| || |||||||| || Sbjct 3210376 TAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGA 3210435 Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTT-GGGACAT 119479 || |||||||| ||||| || || || | ||||| |||| || ||| | ||||| Sbjct 3210436 TGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAA-GTATCTTAGAGACAT 3210494 Query 119480 CTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 119539 || ||| || ||||| || ||| ||| ||||| ||||||| | || | Sbjct 3210495 TAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCT 3210554 Query 119540 CATAAACATGTATTGGGG 119557 ||| | ||||| ||| || Sbjct 3210555 CATGATCATGTGTTGAGG 3210572 Score = 102 bits (112), Expect = 1e-16 Identities = 349/531 (66%), Gaps = 25/531 (5%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| | ||| || || | | | || | ||| || |||||| || ||| Sbjct 1143796 GGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACC 1143855 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 |||||| | |||| ||||||||||||||| || ||| ||| || |||||||| || | Sbjct 1143856 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACAC 1143915 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATC-- 130191 || ||||| |||||||||| | | ||||| | | ||| ||| || ||| Sbjct 1143916 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGC---GTATAGGG-CTTCGTCATCAC 1143971 Query 130192 -AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-T 130249 || ||| | || ||||| || ||||||| | ||| || | ||| | || || | Sbjct 1143972 GAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCAT 1144031 Query 130250 TCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAAT 130307 ||| |||| ||| | || || | ||||| |||||||| | || || | |||| Sbjct 1144032 TCAACAAGAATTCGT--GTTCCTTA-GGATCCTTGATGTAAGTGTCAATCAACAACGAAT 1144088 Query 130308 ATGTTTCGCCATGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCG 130366 | |||||| |||| ||| ||| || || || |||||||| | ||||| Sbjct 1144089 AAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAAC-CGTAGAAACACTTGGCTTCT 1144147 Query 130367 CTTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGAC 130426 || || |||||| | | || || | | || || || || |||||||| Sbjct 1144148 GGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAA 1144207 Query 130427 CCAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GG 130480 ||||||| ||||| || | | | | | ||| || || |||||||||| | Sbjct 1144208 GCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTC---TCGTTCTCGTTCATTCTG 1144264 Query 130481 GTCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAA 130531 | |||||||| | ||||||||| || | ||| | || || ||||||||| Sbjct 1144265 TTGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAA 1144315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434426956000