Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq88 302 5e-77 seq1 302 5e-77 >seq88 Length=341902 Score = 302 bits (334), Expect = 5e-77 Identities = 920/1403 (66%), Gaps = 53/1403 (4%) Strand=Plus/Plus Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGA 104288 ||||| ||||| | ||||| ||||||| || || ||| ||||| || ||||| | Sbjct 13116 ACATGATCATGAGAGTGGCTGTCGGTATCCACGGTAGAGATATTGAAAAGGTTTTGGAAA 13175 Query 104289 CATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCT 104347 | ||| || ||||| | ||| || |||| ||||| | || || || ||||||||| Sbjct 13176 CTTACAACCTAATGTCTCTAAGATAC-TTCACACACGCTTCGCCTACACTTTTCAATGCT 13234 Query 104348 GGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 104407 ||||| || || |||||||| || ||||| | |||| ||||| || || || Sbjct 13235 GGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCCATGAAGGAAGATTCCATT 13294 Query 104408 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 104467 | ||||| || | ||| | | ||| ||||| ||||| ||| ||||| |||||| Sbjct 13295 GAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCTAAGACCGCTGGTGGTATT 13354 Query 104468 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 104527 || ||||||| || | | | | | ||| ||| || || || ||| Sbjct 13355 GGTTTGCACATTCACAACATTCGTTCTACCGGTTCTTACATTGCTGGTACTAACGGTACT 13414 Query 104528 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 104587 || | ||||||||||||||| |||| || || ||| ||| || || || || | ||| Sbjct 13415 TCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCCCGTTACGTTGACCAA 13474 Query 104588 GCTGGGCGTCGAAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGCACGCGGAT 104641 | ||| | ||| || || |||| | || | |||||||||||| | ||| Sbjct 13475 GGTGG---TAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAGCCATGGCACTCAGAT 13531 Query 104642 ATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC-GCGA 104700 ||| | || ||| | || | | ||||| ||| | || || || ||| | || Sbjct 13532 ATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGAAGAAATCCG-TGCAAGAGA 13590 Query 104701 TCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAA 104760 | ||| | || || ||||| |||||||| |||||||||||||| ||| ||| | | Sbjct 13591 CTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAAGAGAGTCGAGAAGAACGAAGA 13650 Query 104761 TTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTT 104820 |||| || | || | |||| || | ||||| || | | |||| ||||| || || Sbjct 13651 TTGGACTTTGTTCTCTCCAAACGAAGCACCAGGCTTACCAGATGTTTACGGTGATGAATT 13710 Query 104821 TGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGC 104880 |||||| | ||| | |||||| |||||| || | | ||| || ||| Sbjct 13711 TGAAGCATTGTACGAACGTTACGAGAGAGAAGGCCGTGGTAGAAAGACTGTCAAGGCTCA 13770 Query 104881 CGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTA 104940 | ||||| | ||||| | | |||||||||| |||||||| |||| |||||| || Sbjct 13771 AAAGTTGTGGTACGCTATCTTGGAAGCTCAAACCGAAACTGGTACCCCATTCATGCTATA 13830 Query 104941 CAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAA 105000 ||| || || |||||| | ||||||||||||||||| |||||| |||||| ||| || Sbjct 13831 CAAGGATGCTTGTAACAAGAAGAGTAATCAAAAGAACTTGGGTACTATCAAGTCTTCGAA 13890 Query 105001 TCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGC 105060 | ||| |||||| | |||| | || ||| || || ||||| |||||| | || Sbjct 13891 CTTGTGTTGTGAAATCGTTGAATACTCTAACCCAGAAGAAACCGCTGTTTGTAACTTGGC 13950 Query 105061 ATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGA-CAAA-GACATTTGATTA---TGAA 105115 || |||||| | || || || || | | | |||| || || | | | || Sbjct 13951 TTCTATCGCTTTGCC--AG--CGTTCATTGAAATATCAAACGA----TGGTAAGACTCAA 14002 Query 105116 A-----AACTCCACGAAGTT--ACGAAAAC--------TGTCACCAAAAACCTAAACAGA 105160 | |||| || |||||| |||| | | | | || ||| | |||||| Sbjct 14003 ACCTACAACTTCAAGAAGTTGCACGATATCTCTAAGGTTTTGACTCGCAACTTGAACAGA 14062 Query 105161 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220 | ||||| | || | ||| || ||||| |||||| | | ||| || |||||||| | Sbjct 14063 ATCATTGACCGTAACTATTATCCAGTTGAAACTGCTAGAAGATCAAACATGAGACATAGA 14122 Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT 105280 || |||| | |||||||| ||| | || || | ||||| | || ||||| Sbjct 14123 CCTATTGCATTGGGTGTTCAAGGTTTAGCCGACGCTTTCATGATGCTACGTTTGCCATTT 14182 Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340 || || || ||||| ||| | | || | | || ||||| || || || || | ||| Sbjct 14183 GACTCTGAAGAAGCAAAGAGATTGAACGTCCAAATCTTTGAAACTATCTACCATGGTGCT 14242 Query 105341 CTTGAGGCGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 105398 ||| || | || || |||||| ||| || |||||||||||| | || || | Sbjct 14243 TGTGAAGC--CTCCATGGAATTGGCAAAGGAAGAAGGTCCATATGAATCTTTCCCAGGCT 14300 Query 105399 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA-CCAAGCTTCAC 105457 ||||||| || |||| | | ||||| ||| | ||| ||| ||| || | || | Sbjct 14301 CTCCAGCATCTGAAGGTAAGTTACAATTCGATCTATGG---GGTAAGACCCCAACTAACC 14357 Query 105458 TA--CGACTGGGA-AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTC 105514 || || ||||| | || | |||| |||||| | | ||||| | ||| | | Sbjct 14358 TATGGGAATGGGATAACT-TGAAGGCTGAAATCAAGCAACACGGTCTAAGAAACTCTTTG 14416 Query 105515 CTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 105574 | | |||||||||||||| || || || | |||||||||||| | || || || || Sbjct 14417 TTGCTCGCTCCAATGCCAACCGCTTCTACATCCCAAATCTTGGGTTACAACGAGTGTTTC 14476 Query 105575 GAACCCTACACGACGAACATCTA 105597 || || ||||| | ||||| || Sbjct 14477 GAGCCATACACTTCCAACATGTA 14499 >seq1 Length=4213555 Score = 302 bits (334), Expect = 5e-77 Identities = 920/1403 (66%), Gaps = 53/1403 (4%) Strand=Plus/Minus Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGA 104288 ||||| ||||| | ||||| ||||||| || || ||| ||||| || ||||| | Sbjct 3210565 ACATGATCATGAGAGTGGCTGTCGGTATCCACGGTAGAGATATTGAAAAGGTTTTGGAAA 3210506 Query 104289 CATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCT 104347 | ||| || ||||| | ||| || |||| ||||| | || || || ||||||||| Sbjct 3210505 CTTACAACCTAATGTCTCTAAGATAC-TTCACACACGCTTCGCCTACACTTTTCAATGCT 3210447 Query 104348 GGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 104407 ||||| || || |||||||| || ||||| | |||| ||||| || || || Sbjct 3210446 GGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCCATGAAGGAAGATTCCATT 3210387 Query 104408 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 104467 | ||||| || | ||| | | ||| ||||| ||||| ||| ||||| |||||| Sbjct 3210386 GAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCTAAGACCGCTGGTGGTATT 3210327 Query 104468 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 104527 || ||||||| || | | | | | ||| ||| || || || ||| Sbjct 3210326 GGTTTGCACATTCACAACATTCGTTCTACCGGTTCTTACATTGCTGGTACTAACGGTACT 3210267 Query 104528 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 104587 || | ||||||||||||||| |||| || || ||| ||| || || || || | ||| Sbjct 3210266 TCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCCCGTTACGTTGACCAA 3210207 Query 104588 GCTGGGCGTCGAAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGCACGCGGAT 104641 | ||| | ||| || || |||| | || | |||||||||||| | ||| Sbjct 3210206 GGTGG---TAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAGCCATGGCACTCAGAT 3210150 Query 104642 ATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC-GCGA 104700 ||| | || ||| | || | | ||||| ||| | || || || ||| | || Sbjct 3210149 ATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGAAGAAATCCG-TGCAAGAGA 3210091 Query 104701 TCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAA 104760 | ||| | || || ||||| |||||||| |||||||||||||| ||| ||| | | Sbjct 3210090 CTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAAGAGAGTCGAGAAGAACGAAGA 3210031 Query 104761 TTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTT 104820 |||| || | || | |||| || | ||||| || | | |||| ||||| || || Sbjct 3210030 TTGGACTTTGTTCTCTCCAAACGAAGCACCAGGCTTACCAGATGTTTACGGTGATGAATT 3209971 Query 104821 TGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGC 104880 |||||| | ||| | |||||| |||||| || | | ||| || ||| Sbjct 3209970 TGAAGCATTGTACGAACGTTACGAGAGAGAAGGCCGTGGTAGAAAGACTGTCAAGGCTCA 3209911 Query 104881 CGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTA 104940 | ||||| | ||||| | | |||||||||| |||||||| |||| |||||| || Sbjct 3209910 AAAGTTGTGGTACGCTATCTTGGAAGCTCAAACCGAAACTGGTACCCCATTCATGCTATA 3209851 Query 104941 CAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAA 105000 ||| || || |||||| | ||||||||||||||||| |||||| |||||| ||| || Sbjct 3209850 CAAGGATGCTTGTAACAAGAAGAGTAATCAAAAGAACTTGGGTACTATCAAGTCTTCGAA 3209791 Query 105001 TCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGC 105060 | ||| |||||| | |||| | || ||| || || ||||| |||||| | || Sbjct 3209790 CTTGTGTTGTGAAATCGTTGAATACTCTAACCCAGAAGAAACCGCTGTTTGTAACTTGGC 3209731 Query 105061 ATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGA-CAAA-GACATTTGATTA---TGAA 105115 || |||||| | || || || || | | | |||| || || | | | || Sbjct 3209730 TTCTATCGCTTTGCC--AG--CGTTCATTGAAATATCAAACGA----TGGTAAGACTCAA 3209679 Query 105116 A-----AACTCCACGAAGTT--ACGAAAAC--------TGTCACCAAAAACCTAAACAGA 105160 | |||| || |||||| |||| | | | | || ||| | |||||| Sbjct 3209678 ACCTACAACTTCAAGAAGTTGCACGATATCTCTAAGGTTTTGACTCGCAACTTGAACAGA 3209619 Query 105161 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220 | ||||| | || | ||| || ||||| |||||| | | ||| || |||||||| | Sbjct 3209618 ATCATTGACCGTAACTATTATCCAGTTGAAACTGCTAGAAGATCAAACATGAGACATAGA 3209559 Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT 105280 || |||| | |||||||| ||| | || || | ||||| | || ||||| Sbjct 3209558 CCTATTGCATTGGGTGTTCAAGGTTTAGCCGACGCTTTCATGATGCTACGTTTGCCATTT 3209499 Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340 || || || ||||| ||| | | || | | || ||||| || || || || | ||| Sbjct 3209498 GACTCTGAAGAAGCAAAGAGATTGAACGTCCAAATCTTTGAAACTATCTACCATGGTGCT 3209439 Query 105341 CTTGAGGCGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 105398 ||| || | || || |||||| ||| || |||||||||||| | || || | Sbjct 3209438 TGTGAAGC--CTCCATGGAATTGGCAAAGGAAGAAGGTCCATATGAATCTTTCCCAGGCT 3209381 Query 105399 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA-CCAAGCTTCAC 105457 ||||||| || |||| | | ||||| ||| | ||| ||| ||| || | || | Sbjct 3209380 CTCCAGCATCTGAAGGTAAGTTACAATTCGATCTATGG---GGTAAGACCCCAACTAACC 3209324 Query 105458 TA--CGACTGGGA-AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTC 105514 || || ||||| | || | |||| |||||| | | ||||| | ||| | | Sbjct 3209323 TATGGGAATGGGATAACT-TGAAGGCTGAAATCAAGCAACACGGTCTAAGAAACTCTTTG 3209265 Query 105515 CTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 105574 | | |||||||||||||| || || || | |||||||||||| | || || || || Sbjct 3209264 TTGCTCGCTCCAATGCCAACCGCTTCTACATCCCAAATCTTGGGTTACAACGAGTGTTTC 3209205 Query 105575 GAACCCTACACGACGAACATCTA 105597 || || ||||| | ||||| || Sbjct 3209204 GAGCCATACACTTCCAACATGTA 3209182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260070924000