Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq88 170 2e-37 seq1 170 2e-37 >seq88 Length=341902 Score = 170 bits (188), Expect = 2e-37 Identities = 506/770 (66%), Gaps = 14/770 (2%) Strand=Plus/Minus Query 79049 GGCACAGCGAT----GCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATG 79104 |||| |||||| |||| ||| || || || || || || ||| |||| || | | Sbjct 13965 GGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACG 13906 Query 79105 ATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCG 79164 ||||| ||||| || || |||||||| || || | |||||| || || ||||||| | Sbjct 13905 ATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTG 13846 Query 79165 TTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGA-CTCTTGAGAAC 79223 ||||| || |||||||| |||| | || || || || || ||| || ||| Sbjct 13845 TTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATA 13786 Query 79224 GCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACC--GACCCTGTGCGACGTA- 79280 || || ||| | | | ||| |||| ||| | |||| | || | | |||| Sbjct 13785 GC-GTACCACAACTTTTGAGCCTTGACAGTCTT--TCTACCACGGCCTTCTCTCTCGTAA 13729 Query 79281 CGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTG 79340 ||| || ||||| | | || | || || || ||||| || | ||| || |||| Sbjct 13728 CGTTCG-TACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTT 13670 Query 79341 CGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGAT 79400 || | | || ||| || |||| |||||| || ||| |||||| || || ||||| Sbjct 13669 TGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGAT 13610 Query 79401 CCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAG 79460 ||| || || | ||| | ||| | ||| || || || | || |||||| | | Sbjct 13609 CCATAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGAT 13550 Query 79461 CTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTT 79520 |||| ||||| | ||| || | |||||| ||||| | || | |||||| | ||| Sbjct 13549 GTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGG 13490 Query 79521 GCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGG 79580 | |||| || || |||| ||||| ||||| |||||||||||||| || | ||| || Sbjct 13489 TCTCTTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGG 13430 Query 79581 CACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTT 79640 | || |||| | ||||| || || || | |||| | | |||||||| Sbjct 13429 AATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTT 13370 Query 79641 CGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCG 79699 | | | ||| | || || || || | ||| ||||| || || ||||| | | Sbjct 13369 -GTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAG 13311 Query 79700 TCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCT 79759 | ||||| || || || || || || |||||||| || || ||||| || ||||| | Sbjct 13310 TGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTT 13251 Query 79760 GTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAG 79809 |||| | ||||| || ||||| || || |||| ||||| |||||| Sbjct 13250 GTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAG 13201 Score = 156 bits (172), Expect = 5e-33 Identities = 493/756 (65%), Gaps = 6/756 (1%) Strand=Plus/Plus Query 19195 CTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAG 19254 |||||| ||||| |||| || |||||||| || ||||| | || || ||||| Sbjct 13201 CTTCACACACGCTTCGCCTACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATC 13260 Query 19255 CTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGA 19314 |||||||||||||| |||||||| || |||||| || || ||||| || | ||||| Sbjct 13261 ATGTTTCCTAGTGGCCATGAAGGAAGATTCCATTGAAGGTATTTACGACACTTTGAAGGA 13320 Query 19315 GTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC-TGCTCGAATATCCGGT 19373 || || ||||| ||| | || ||||| || | ||| | | | || || || | Sbjct 13321 ATGTGCCATGATCTCTAAGACCGCTGGTGGTATTGGTTTGCACATTCAC-AACATTCGTT 13379 Query 19374 CGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCC 19433 | | ||| | || ||| || ||||| | ||||||| | |||||| | | Sbjct 13380 CTACCGGTTCTTACATTGCTGGTACTAACGGTACTTCTAACGGTATTATTCCAATGATTC 13439 Query 19434 GCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGT 19493 | || ||||||||||| ||| | ||||| |||| || || ||| | || | | Sbjct 13440 GTGTTTTCAACAACACTGCCCGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCT 13499 Query 19494 TCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGA 19553 ||||| | ||| |||||||||||||| | || || | || ||| |||| | | || Sbjct 13500 TCGCCTTGTACATCGAGCCATGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGA 13559 Query 19554 ACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACC 19613 |||| ||| | || || || || | ||| | ||| | || | ||||| || || | Sbjct 13560 ACCACGGTAAGGAAGAAATCCGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATC 13619 Query 19614 TATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCC 19673 | |||||| ||| || |||||| ||||||| ||| || | | || ||||| | Sbjct 13620 TTTTCATGAAGAGAGTCGAGAAGAACGAAGATTGGACTTTGTTCTCTCCAAACGAAGCAC 13679 Query 19674 CTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTACCGGAC-TTACGTAGCC 19732 | ||| |||| || || ||||| || | || | | ||||| || || ||||| Sbjct 13680 CAGGCTTACCAGATGTTTACGGTGATGAATTTGAAGCATTGTA-CGAACGTTACGAGAGA 13738 Query 19733 CAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGC 19792 | ||||| | ||| ||| ||| | | | ||| | ||| || |||| Sbjct 13739 GAAGGCCGTGGTAGAAAGACTGTCAAGGCTCAAAAGTTGTGGTA-CGCTATCTTGGAAGC 13797 Query 19793 -CAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAA 19851 || ||| || || || || | |||| |||||||| || ||| ||| || Sbjct 13798 TCAAACCGAAACTGGTACCCCATTCATGCTATACAAGGATGCTTGTAACAAGAAGAGTAA 13857 Query 19852 TCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTC 19911 ||| |||||| | || | |||||||| || ||| ||||| ||||||| | || || Sbjct 13858 TCAAAAGAACTTGGGTACTATCAAGTCTTCGAACTTGTGTTGTGAAATCGTTGAATACTC 13917 Query 19912 CAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTC 19947 || || || || || || || ||||| |||| || Sbjct 13918 TAACCCAGAAGAAACCGCTGTTTGTAACTTGGCTTC 13953 Score = 89.7 bits (98), Expect = 6e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 |||||||| || ||||| | |||||||||||||||||| | ||||| | || ||| Sbjct 14838 TAGTACATACCAGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTA 14779 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 ||| | | ||| ||| ||||| | ||| ||||| || ||||| || ||| | Sbjct 14778 CCCATAGTTGGGGCACGAATGTGAATGTTCAACGATTGGGATTGATCGATATAAGCAGCA 14719 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378 ||||| || ||||| ||||| | |||||||| || ||||| | ||| ||| | Sbjct 14718 CGGTCAGCGGCCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAA 14659 Query 78379 GCCTTCAGCTCTTCCTGGATGT 78400 | || ||||||| |||||| Sbjct 14658 TCTTTTAGCTCTTGTGGGATGT 14637 >seq1 Length=4213555 Score = 170 bits (188), Expect = 2e-37 Identities = 506/770 (66%), Gaps = 14/770 (2%) Strand=Plus/Plus Query 79049 GGCACAGCGAT----GCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATG 79104 |||| |||||| |||| ||| || || || || || || ||| |||| || | | Sbjct 3209716 GGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACG 3209775 Query 79105 ATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCG 79164 ||||| ||||| || || |||||||| || || | |||||| || || ||||||| | Sbjct 3209776 ATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTG 3209835 Query 79165 TTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGA-CTCTTGAGAAC 79223 ||||| || |||||||| |||| | || || || || || ||| || ||| Sbjct 3209836 TTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATA 3209895 Query 79224 GCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACC--GACCCTGTGCGACGTA- 79280 || || ||| | | | ||| |||| ||| | |||| | || | | |||| Sbjct 3209896 GC-GTACCACAACTTTTGAGCCTTGACAGTCTT--TCTACCACGGCCTTCTCTCTCGTAA 3209952 Query 79281 CGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTG 79340 ||| || ||||| | | || | || || || ||||| || | ||| || |||| Sbjct 3209953 CGTTCG-TACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTT 3210011 Query 79341 CGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGAT 79400 || | | || ||| || |||| |||||| || ||| |||||| || || ||||| Sbjct 3210012 TGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGAT 3210071 Query 79401 CCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAG 79460 ||| || || | ||| | ||| | ||| || || || | || |||||| | | Sbjct 3210072 CCATAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGAT 3210131 Query 79461 CTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTT 79520 |||| ||||| | ||| || | |||||| ||||| | || | |||||| | ||| Sbjct 3210132 GTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGG 3210191 Query 79521 GCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGG 79580 | |||| || || |||| ||||| ||||| |||||||||||||| || | ||| || Sbjct 3210192 TCTCTTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGG 3210251 Query 79581 CACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTT 79640 | || |||| | ||||| || || || | |||| | | |||||||| Sbjct 3210252 AATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTT 3210311 Query 79641 CGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCG 79699 | | | ||| | || || || || | ||| ||||| || || ||||| | | Sbjct 3210312 -GTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAG 3210370 Query 79700 TCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCT 79759 | ||||| || || || || || || |||||||| || || ||||| || ||||| | Sbjct 3210371 TGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTT 3210430 Query 79760 GTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAG 79809 |||| | ||||| || ||||| || || |||| ||||| |||||| Sbjct 3210431 GTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAG 3210480 Score = 156 bits (172), Expect = 5e-33 Identities = 493/756 (65%), Gaps = 6/756 (1%) Strand=Plus/Minus Query 19195 CTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAG 19254 |||||| ||||| |||| || |||||||| || ||||| | || || ||||| Sbjct 3210480 CTTCACACACGCTTCGCCTACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATC 3210421 Query 19255 CTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGA 19314 |||||||||||||| |||||||| || |||||| || || ||||| || | ||||| Sbjct 3210420 ATGTTTCCTAGTGGCCATGAAGGAAGATTCCATTGAAGGTATTTACGACACTTTGAAGGA 3210361 Query 19315 GTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC-TGCTCGAATATCCGGT 19373 || || ||||| ||| | || ||||| || | ||| | | | || || || | Sbjct 3210360 ATGTGCCATGATCTCTAAGACCGCTGGTGGTATTGGTTTGCACATTCAC-AACATTCGTT 3210302 Query 19374 CGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCC 19433 | | ||| | || ||| || ||||| | ||||||| | |||||| | | Sbjct 3210301 CTACCGGTTCTTACATTGCTGGTACTAACGGTACTTCTAACGGTATTATTCCAATGATTC 3210242 Query 19434 GCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGT 19493 | || ||||||||||| ||| | ||||| |||| || || ||| | || | | Sbjct 3210241 GTGTTTTCAACAACACTGCCCGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCT 3210182 Query 19494 TCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGA 19553 ||||| | ||| |||||||||||||| | || || | || ||| |||| | | || Sbjct 3210181 TCGCCTTGTACATCGAGCCATGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGA 3210122 Query 19554 ACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACC 19613 |||| ||| | || || || || | ||| | ||| | || | ||||| || || | Sbjct 3210121 ACCACGGTAAGGAAGAAATCCGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATC 3210062 Query 19614 TATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCC 19673 | |||||| ||| || |||||| ||||||| ||| || | | || ||||| | Sbjct 3210061 TTTTCATGAAGAGAGTCGAGAAGAACGAAGATTGGACTTTGTTCTCTCCAAACGAAGCAC 3210002 Query 19674 CTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTACCGGAC-TTACGTAGCC 19732 | ||| |||| || || ||||| || | || | | ||||| || || ||||| Sbjct 3210001 CAGGCTTACCAGATGTTTACGGTGATGAATTTGAAGCATTGTA-CGAACGTTACGAGAGA 3209943 Query 19733 CAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGC 19792 | ||||| | ||| ||| ||| | | | ||| | ||| || |||| Sbjct 3209942 GAAGGCCGTGGTAGAAAGACTGTCAAGGCTCAAAAGTTGTGGTA-CGCTATCTTGGAAGC 3209884 Query 19793 -CAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAA 19851 || ||| || || || || | |||| |||||||| || ||| ||| || Sbjct 3209883 TCAAACCGAAACTGGTACCCCATTCATGCTATACAAGGATGCTTGTAACAAGAAGAGTAA 3209824 Query 19852 TCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTC 19911 ||| |||||| | || | |||||||| || ||| ||||| ||||||| | || || Sbjct 3209823 TCAAAAGAACTTGGGTACTATCAAGTCTTCGAACTTGTGTTGTGAAATCGTTGAATACTC 3209764 Query 19912 CAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTC 19947 || || || || || || || ||||| |||| || Sbjct 3209763 TAACCCAGAAGAAACCGCTGTTTGTAACTTGGCTTC 3209728 Score = 89.7 bits (98), Expect = 6e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 |||||||| || ||||| | |||||||||||||||||| | ||||| | || ||| Sbjct 3208843 TAGTACATACCAGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTA 3208902 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 ||| | | ||| ||| ||||| | ||| ||||| || ||||| || ||| | Sbjct 3208903 CCCATAGTTGGGGCACGAATGTGAATGTTCAACGATTGGGATTGATCGATATAAGCAGCA 3208962 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378 ||||| || ||||| ||||| | |||||||| || ||||| | ||| ||| | Sbjct 3208963 CGGTCAGCGGCCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAA 3209022 Query 78379 GCCTTCAGCTCTTCCTGGATGT 78400 | || ||||||| |||||| Sbjct 3209023 TCTTTTAGCTCTTGTGGGATGT 3209044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524114344000