Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq88 165 9e-36
seq1 165 9e-36
>seq88
Length=341902
Score = 165 bits (182), Expect = 9e-36
Identities = 463/700 (66%), Gaps = 8/700 (1%)
Strand=Plus/Plus
Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302
|| || ||| || ||||| | || ||||| || ||||| |||| || || |||||
Sbjct 13172 GAAACTTACAACCTAATGTCTCTAAGATACTTCACACACGCTTCGCCTACACTTTTCAAT 13231
Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362
|||||||| ||| || || ||||| || ||||| ||||| |||||||| || ||
Sbjct 13232 GCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCCATGAAGGAAGATTCC 13291
Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422
|| || || || ||||| || | ||||| |||||| ||||| ||| | ||||||
Sbjct 13292 ATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCTAAGACCGCTGGTGGT 13351
Query 53423 ATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481
|| ||| | ||| | | | ||| | ||| | | ||| | || || || |||||
Sbjct 13352 ATTGGTTTGCACATTCAC-AACATTCGTTCTACCGGTTCTTACATTGCTGGTACTAACGG 13410
Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541
| | || || | || ||| | || || ||||||||||| ||||| ||||| |
Sbjct 13411 TACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCCCGTTACGTTGA 13470
Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601
||| |||||| ||| | || | |||||| | ||| ||||||| |||||| | ||
Sbjct 13471 CCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAGCCATGGCACTCAGA 13530
Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTG 53660
|| | || || |||| | | ||| || ||| | ||||| || || ||| | |
Sbjct 13531 TATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGAAGAAATCCG-TGCAAGAG 13589
Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720
|| |||| |||| || ||||| || || || |||||| | | || |||||| |||| |
Sbjct 13590 ACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAAGAGAGTCGAGAAGAACGAAG 13649
Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780
| ||| || | | || ||||| || ||| | | | ||| |||||||| || |
Sbjct 13650 ATTGGACTTTGTTCTCTCCAAACGAAGCACCAGGCTTACCAGATGTTTACGGTGATGAAT 13709
Query 53781 TTAACGAGATGTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839
|| | | |||| || ||| |||| | ||||| | |||| ||||||||
Sbjct 13710 TTGAAGCATTGTA-CGAACGTTACGAGAGAGAAGGCCGTGGTAGAAAGACTGTCAAGGCT 13768
Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGC-CAGGTGGAGACGGGAACGCCGTACATGTG 53898
| || | ||| | || ||| | | ||| || || || || || || | ||||
Sbjct 13769 CAAAAGTTGTGGTACGCTATCTTGGA-AGCTCAAACCGAAACTGGTACCCCATTCATGCT 13827
Query 53899 CTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
||||||||| | ||| ||||||| || || ||||||
Sbjct 13828 ATACAAGGATGCTTGTAACAAGAAGAGTAATCAAAAGAAC 13867
>seq1
Length=4213555
Score = 165 bits (182), Expect = 9e-36
Identities = 463/700 (66%), Gaps = 8/700 (1%)
Strand=Plus/Minus
Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302
|| || ||| || ||||| | || ||||| || ||||| |||| || || |||||
Sbjct 3210509 GAAACTTACAACCTAATGTCTCTAAGATACTTCACACACGCTTCGCCTACACTTTTCAAT 3210450
Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362
|||||||| ||| || || ||||| || ||||| ||||| |||||||| || ||
Sbjct 3210449 GCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCCATGAAGGAAGATTCC 3210390
Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422
|| || || || ||||| || | ||||| |||||| ||||| ||| | ||||||
Sbjct 3210389 ATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCTAAGACCGCTGGTGGT 3210330
Query 53423 ATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481
|| ||| | ||| | | | ||| | ||| | | ||| | || || || |||||
Sbjct 3210329 ATTGGTTTGCACATTCAC-AACATTCGTTCTACCGGTTCTTACATTGCTGGTACTAACGG 3210271
Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541
| | || || | || ||| | || || ||||||||||| ||||| ||||| |
Sbjct 3210270 TACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCCCGTTACGTTGA 3210211
Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601
||| |||||| ||| | || | |||||| | ||| ||||||| |||||| | ||
Sbjct 3210210 CCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAGCCATGGCACTCAGA 3210151
Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTG 53660
|| | || || |||| | | ||| || ||| | ||||| || || ||| | |
Sbjct 3210150 TATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGAAGAAATCCG-TGCAAGAG 3210092
Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720
|| |||| |||| || ||||| || || || |||||| | | || |||||| |||| |
Sbjct 3210091 ACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAAGAGAGTCGAGAAGAACGAAG 3210032
Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780
| ||| || | | || ||||| || ||| | | | ||| |||||||| || |
Sbjct 3210031 ATTGGACTTTGTTCTCTCCAAACGAAGCACCAGGCTTACCAGATGTTTACGGTGATGAAT 3209972
Query 53781 TTAACGAGATGTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839
|| | | |||| || ||| |||| | ||||| | |||| ||||||||
Sbjct 3209971 TTGAAGCATTGTA-CGAACGTTACGAGAGAGAAGGCCGTGGTAGAAAGACTGTCAAGGCT 3209913
Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGC-CAGGTGGAGACGGGAACGCCGTACATGTG 53898
| || | ||| | || ||| | | ||| || || || || || || | ||||
Sbjct 3209912 CAAAAGTTGTGGTACGCTATCTTGGA-AGCTCAAACCGAAACTGGTACCCCATTCATGCT 3209854
Query 53899 CTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
||||||||| | ||| ||||||| || || ||||||
Sbjct 3209853 ATACAAGGATGCTTGTAACAAGAAGAGTAATCAAAAGAAC 3209814
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215315980000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |