Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq88 165 9e-36 seq1 165 9e-36 >seq88 Length=341902 Score = 165 bits (182), Expect = 9e-36 Identities = 463/700 (66%), Gaps = 8/700 (1%) Strand=Plus/Plus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 || || ||| || ||||| | || ||||| || ||||| |||| || || ||||| Sbjct 13172 GAAACTTACAACCTAATGTCTCTAAGATACTTCACACACGCTTCGCCTACACTTTTCAAT 13231 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 |||||||| ||| || || ||||| || ||||| ||||| |||||||| || || Sbjct 13232 GCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCCATGAAGGAAGATTCC 13291 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 || || || || ||||| || | ||||| |||||| ||||| ||| | |||||| Sbjct 13292 ATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCTAAGACCGCTGGTGGT 13351 Query 53423 ATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 || ||| | ||| | | | ||| | ||| | | ||| | || || || ||||| Sbjct 13352 ATTGGTTTGCACATTCAC-AACATTCGTTCTACCGGTTCTTACATTGCTGGTACTAACGG 13410 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | | || || | || ||| | || || ||||||||||| ||||| ||||| | Sbjct 13411 TACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCCCGTTACGTTGA 13470 Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601 ||| |||||| ||| | || | |||||| | ||| ||||||| |||||| | || Sbjct 13471 CCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAGCCATGGCACTCAGA 13530 Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTG 53660 || | || || |||| | | ||| || ||| | ||||| || || ||| | | Sbjct 13531 TATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGAAGAAATCCG-TGCAAGAG 13589 Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720 || |||| |||| || ||||| || || || |||||| | | || |||||| |||| | Sbjct 13590 ACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAAGAGAGTCGAGAAGAACGAAG 13649 Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780 | ||| || | | || ||||| || ||| | | | ||| |||||||| || | Sbjct 13650 ATTGGACTTTGTTCTCTCCAAACGAAGCACCAGGCTTACCAGATGTTTACGGTGATGAAT 13709 Query 53781 TTAACGAGATGTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839 || | | |||| || ||| |||| | ||||| | |||| |||||||| Sbjct 13710 TTGAAGCATTGTA-CGAACGTTACGAGAGAGAAGGCCGTGGTAGAAAGACTGTCAAGGCT 13768 Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGC-CAGGTGGAGACGGGAACGCCGTACATGTG 53898 | || | ||| | || ||| | | ||| || || || || || || | |||| Sbjct 13769 CAAAAGTTGTGGTACGCTATCTTGGA-AGCTCAAACCGAAACTGGTACCCCATTCATGCT 13827 Query 53899 CTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 ||||||||| | ||| ||||||| || || |||||| Sbjct 13828 ATACAAGGATGCTTGTAACAAGAAGAGTAATCAAAAGAAC 13867 >seq1 Length=4213555 Score = 165 bits (182), Expect = 9e-36 Identities = 463/700 (66%), Gaps = 8/700 (1%) Strand=Plus/Minus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 || || ||| || ||||| | || ||||| || ||||| |||| || || ||||| Sbjct 3210509 GAAACTTACAACCTAATGTCTCTAAGATACTTCACACACGCTTCGCCTACACTTTTCAAT 3210450 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 |||||||| ||| || || ||||| || ||||| ||||| |||||||| || || Sbjct 3210449 GCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCCATGAAGGAAGATTCC 3210390 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 || || || || ||||| || | ||||| |||||| ||||| ||| | |||||| Sbjct 3210389 ATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCTAAGACCGCTGGTGGT 3210330 Query 53423 ATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 || ||| | ||| | | | ||| | ||| | | ||| | || || || ||||| Sbjct 3210329 ATTGGTTTGCACATTCAC-AACATTCGTTCTACCGGTTCTTACATTGCTGGTACTAACGG 3210271 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | | || || | || ||| | || || ||||||||||| ||||| ||||| | Sbjct 3210270 TACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCCCGTTACGTTGA 3210211 Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601 ||| |||||| ||| | || | |||||| | ||| ||||||| |||||| | || Sbjct 3210210 CCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAGCCATGGCACTCAGA 3210151 Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTG 53660 || | || || |||| | | ||| || ||| | ||||| || || ||| | | Sbjct 3210150 TATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGAAGAAATCCG-TGCAAGAG 3210092 Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720 || |||| |||| || ||||| || || || |||||| | | || |||||| |||| | Sbjct 3210091 ACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAAGAGAGTCGAGAAGAACGAAG 3210032 Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780 | ||| || | | || ||||| || ||| | | | ||| |||||||| || | Sbjct 3210031 ATTGGACTTTGTTCTCTCCAAACGAAGCACCAGGCTTACCAGATGTTTACGGTGATGAAT 3209972 Query 53781 TTAACGAGATGTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839 || | | |||| || ||| |||| | ||||| | |||| |||||||| Sbjct 3209971 TTGAAGCATTGTA-CGAACGTTACGAGAGAGAAGGCCGTGGTAGAAAGACTGTCAAGGCT 3209913 Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGC-CAGGTGGAGACGGGAACGCCGTACATGTG 53898 | || | ||| | || ||| | | ||| || || || || || || | |||| Sbjct 3209912 CAAAAGTTGTGGTACGCTATCTTGGA-AGCTCAAACCGAAACTGGTACCCCATTCATGCT 3209854 Query 53899 CTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 ||||||||| | ||| ||||||| || || |||||| Sbjct 3209853 ATACAAGGATGCTTGTAACAAGAAGAGTAATCAAAAGAAC 3209814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215315980000