Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq91 141 1e-28 seq88 134 2e-26 seq1 134 2e-26 >seq91 Length=167622 Score = 141 bits (156), Expect = 1e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| || || || ||||||||||| | || || || || Sbjct 23120 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 23179 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | ||| |||| || || |||||||| || |||||||||||||| Sbjct 23180 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 23239 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||||||| | || |||| | | || | | ||||| || Sbjct 23240 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 23299 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 ||||||||||||| || ||||| | |||||| Sbjct 23300 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTG 23332 >seq88 Length=341902 Score = 134 bits (148), Expect = 2e-26 Identities = 516/803 (64%), Gaps = 17/803 (2%) Strand=Plus/Minus Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009 || |||||||| ||||| || |||||||| || ||||||| ||| || || || | Sbjct 13911 TCAACGATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTC 13852 Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069 || ||| ||||| |||||||| |||| | |||||||| || ||| || | | Sbjct 13851 TTCTTGTTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCC 13792 Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACA 81129 | ||| |||| ||| | || | |||||||| ||| | |||||| | | Sbjct 13791 AAGATAGCGTACCACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCG 13732 Query 81130 TACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189 || |||| | | || || | |||||| || || | | | |||| ||| Sbjct 13731 TAACGTTCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCG 13672 Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGG 81249 || || | | || ||| || || ||||| || |||||||||| || ||| Sbjct 13671 TTTGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGG 13612 Query 81250 ATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCG 81308 ||||| || || | ||||| ||| | ||| || || || | ||| ||||| | Sbjct 13611 ATCCATAGTGCTGGGAACAAGTCTCTTGCA-CGGATTTCTTCCTTACCGTGGTTCTTTCT 13553 Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC 81368 | |||| ||||| | ||| || | ||||||||||| | |||| ||||| | || Sbjct 13552 GATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACC 13493 Query 81369 ------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAA 81422 |||| || |||| |||| |||||||||||||| ||| || ||||| | Sbjct 13492 AGGTCTCTTGTTAC---CACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAAT 13436 Query 81423 CATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG 81482 ||| || || ||||| | || |||||| ||||| | || || || | | || Sbjct 13435 CATTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACG 13376 Query 81483 CACCTTGCTGATTG-AAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGT 81541 | ||| ||| || | ||| || ||||| | ||| || ||| ||||| | Sbjct 13375 AATGTTG-TGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCT 13317 Query 81542 TCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTG 81601 ||| || || ||||| || || ||| ||||| |||||| | | | |||||| || Sbjct 13316 TCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATG 13257 Query 81602 ACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATA 81659 |||| || || | ||| || |||||||| ||||| || | ||||| |||| || Sbjct 13256 ACATTTGTGG--ATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTA 13199 Query 81660 ACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACC 81719 | ||||| |||| || |||||| || | |||||| |||||| ||||| Sbjct 13198 TCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACC 13139 Query 81720 GATAGCTACACGCATAAACATGT 81742 || ||| || | ||| | ||||| Sbjct 13138 GACAGCCACTCTCATGATCATGT 13116 >seq1 Length=4213555 Score = 134 bits (148), Expect = 2e-26 Identities = 516/803 (64%), Gaps = 17/803 (2%) Strand=Plus/Plus Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009 || |||||||| ||||| || |||||||| || ||||||| ||| || || || | Sbjct 3209770 TCAACGATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTC 3209829 Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069 || ||| ||||| |||||||| |||| | |||||||| || ||| || | | Sbjct 3209830 TTCTTGTTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCC 3209889 Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACA 81129 | ||| |||| ||| | || | |||||||| ||| | |||||| | | Sbjct 3209890 AAGATAGCGTACCACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCG 3209949 Query 81130 TACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189 || |||| | | || || | |||||| || || | | | |||| ||| Sbjct 3209950 TAACGTTCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCG 3210009 Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGG 81249 || || | | || ||| || || ||||| || |||||||||| || ||| Sbjct 3210010 TTTGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGG 3210069 Query 81250 ATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCG 81308 ||||| || || | ||||| ||| | ||| || || || | ||| ||||| | Sbjct 3210070 ATCCATAGTGCTGGGAACAAGTCTCTTGCA-CGGATTTCTTCCTTACCGTGGTTCTTTCT 3210128 Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC 81368 | |||| ||||| | ||| || | ||||||||||| | |||| ||||| | || Sbjct 3210129 GATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACC 3210188 Query 81369 ------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAA 81422 |||| || |||| |||| |||||||||||||| ||| || ||||| | Sbjct 3210189 AGGTCTCTTGTTAC---CACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAAT 3210245 Query 81423 CATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG 81482 ||| || || ||||| | || |||||| ||||| | || || || | | || Sbjct 3210246 CATTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACG 3210305 Query 81483 CACCTTGCTGATTG-AAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGT 81541 | ||| ||| || | ||| || ||||| | ||| || ||| ||||| | Sbjct 3210306 AATGTTG-TGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCT 3210364 Query 81542 TCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTG 81601 ||| || || ||||| || || ||| ||||| |||||| | | | |||||| || Sbjct 3210365 TCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATG 3210424 Query 81602 ACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATA 81659 |||| || || | ||| || |||||||| ||||| || | ||||| |||| || Sbjct 3210425 ACATTTGTGG--ATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTA 3210482 Query 81660 ACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACC 81719 | ||||| |||| || |||||| || | |||||| |||||| ||||| Sbjct 3210483 TCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACC 3210542 Query 81720 GATAGCTACACGCATAAACATGT 81742 || ||| || | ||| | ||||| Sbjct 3210543 GACAGCCACTCTCATGATCATGT 3210565 Score = 123 bits (136), Expect = 3e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| | || || ||||| || ||| | || || || || ||| | |||| Sbjct 45263 TTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCATT 45322 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || ||||| |||||||| || ||||| |||||||| || | | Sbjct 45323 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTG 45382 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||||||||||||| | || || | | | || | | ||||| || |||||||| Sbjct 45383 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAAG 45442 Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||| ||||| | |||||| | || | ||||| Sbjct 45443 GAATCCACCCTTCACTTGGTCTTGAGACTAAGAGGTGG 45480 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 27505 GAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGAT 27564 || || |||||||||||||| || | | |||||||||||||||||| | || || | Sbjct 1811020 GAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGACGGA 1810961 Query 27565 CGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | || ||| | ||||| || |||||||||||||||| || || | |||||| Sbjct 1810960 AGAACTCTATCCGACTACAACATCCAAAAGGAATCCACACTCCACTTGGTCTTG 1810907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309687112000