Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq91 141 1e-28
seq88 134 2e-26
seq1 134 2e-26
>seq91
Length=167622
Score = 141 bits (156), Expect = 1e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| || || || ||||||||||| | || || || ||
Sbjct 23120 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 23179
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||| |||| || || |||||||| || ||||||||||||||
Sbjct 23180 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 23239
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||||||| | || |||| | | || | | ||||| ||
Sbjct 23240 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 23299
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||| || ||||| | ||||||
Sbjct 23300 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTG 23332
>seq88
Length=341902
Score = 134 bits (148), Expect = 2e-26
Identities = 516/803 (64%), Gaps = 17/803 (2%)
Strand=Plus/Minus
Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009
|| |||||||| ||||| || |||||||| || ||||||| ||| || || || |
Sbjct 13911 TCAACGATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTC 13852
Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069
|| ||| ||||| |||||||| |||| | |||||||| || ||| || | |
Sbjct 13851 TTCTTGTTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCC 13792
Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACA 81129
| ||| |||| ||| | || | |||||||| ||| | |||||| | |
Sbjct 13791 AAGATAGCGTACCACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCG 13732
Query 81130 TACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189
|| |||| | | || || | |||||| || || | | | |||| |||
Sbjct 13731 TAACGTTCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCG 13672
Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGG 81249
|| || | | || ||| || || ||||| || |||||||||| || |||
Sbjct 13671 TTTGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGG 13612
Query 81250 ATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCG 81308
||||| || || | ||||| ||| | ||| || || || | ||| ||||| |
Sbjct 13611 ATCCATAGTGCTGGGAACAAGTCTCTTGCA-CGGATTTCTTCCTTACCGTGGTTCTTTCT 13553
Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC 81368
| |||| ||||| | ||| || | ||||||||||| | |||| ||||| | ||
Sbjct 13552 GATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACC 13493
Query 81369 ------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAA 81422
|||| || |||| |||| |||||||||||||| ||| || ||||| |
Sbjct 13492 AGGTCTCTTGTTAC---CACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAAT 13436
Query 81423 CATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG 81482
||| || || ||||| | || |||||| ||||| | || || || | | ||
Sbjct 13435 CATTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACG 13376
Query 81483 CACCTTGCTGATTG-AAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGT 81541
| ||| ||| || | ||| || ||||| | ||| || ||| ||||| |
Sbjct 13375 AATGTTG-TGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCT 13317
Query 81542 TCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTG 81601
||| || || ||||| || || ||| ||||| |||||| | | | |||||| ||
Sbjct 13316 TCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATG 13257
Query 81602 ACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATA 81659
|||| || || | ||| || |||||||| ||||| || | ||||| |||| ||
Sbjct 13256 ACATTTGTGG--ATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTA 13199
Query 81660 ACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACC 81719
| ||||| |||| || |||||| || | |||||| |||||| |||||
Sbjct 13198 TCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACC 13139
Query 81720 GATAGCTACACGCATAAACATGT 81742
|| ||| || | ||| | |||||
Sbjct 13138 GACAGCCACTCTCATGATCATGT 13116
>seq1
Length=4213555
Score = 134 bits (148), Expect = 2e-26
Identities = 516/803 (64%), Gaps = 17/803 (2%)
Strand=Plus/Plus
Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009
|| |||||||| ||||| || |||||||| || ||||||| ||| || || || |
Sbjct 3209770 TCAACGATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTC 3209829
Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069
|| ||| ||||| |||||||| |||| | |||||||| || ||| || | |
Sbjct 3209830 TTCTTGTTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCC 3209889
Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACA 81129
| ||| |||| ||| | || | |||||||| ||| | |||||| | |
Sbjct 3209890 AAGATAGCGTACCACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCG 3209949
Query 81130 TACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189
|| |||| | | || || | |||||| || || | | | |||| |||
Sbjct 3209950 TAACGTTCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCG 3210009
Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGG 81249
|| || | | || ||| || || ||||| || |||||||||| || |||
Sbjct 3210010 TTTGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGG 3210069
Query 81250 ATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCG 81308
||||| || || | ||||| ||| | ||| || || || | ||| ||||| |
Sbjct 3210070 ATCCATAGTGCTGGGAACAAGTCTCTTGCA-CGGATTTCTTCCTTACCGTGGTTCTTTCT 3210128
Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC 81368
| |||| ||||| | ||| || | ||||||||||| | |||| ||||| | ||
Sbjct 3210129 GATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACC 3210188
Query 81369 ------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAA 81422
|||| || |||| |||| |||||||||||||| ||| || ||||| |
Sbjct 3210189 AGGTCTCTTGTTAC---CACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAAT 3210245
Query 81423 CATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG 81482
||| || || ||||| | || |||||| ||||| | || || || | | ||
Sbjct 3210246 CATTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACG 3210305
Query 81483 CACCTTGCTGATTG-AAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGT 81541
| ||| ||| || | ||| || ||||| | ||| || ||| ||||| |
Sbjct 3210306 AATGTTG-TGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCT 3210364
Query 81542 TCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTG 81601
||| || || ||||| || || ||| ||||| |||||| | | | |||||| ||
Sbjct 3210365 TCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATG 3210424
Query 81602 ACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATA 81659
|||| || || | ||| || |||||||| ||||| || | ||||| |||| ||
Sbjct 3210425 ACATTTGTGG--ATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTA 3210482
Query 81660 ACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACC 81719
| ||||| |||| || |||||| || | |||||| |||||| |||||
Sbjct 3210483 TCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACC 3210542
Query 81720 GATAGCTACACGCATAAACATGT 81742
|| ||| || | ||| | |||||
Sbjct 3210543 GACAGCCACTCTCATGATCATGT 3210565
Score = 123 bits (136), Expect = 3e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| | || || ||||| || ||| | || || || || ||| | ||||
Sbjct 45263 TTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCATT 45322
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || ||||| |||||||| || ||||| |||||||| || | |
Sbjct 45323 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTG 45382
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||||||||||||| | || || | | | || | | ||||| || ||||||||
Sbjct 45383 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAAG 45442
Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||| ||||| | |||||| | || | |||||
Sbjct 45443 GAATCCACCCTTCACTTGGTCTTGAGACTAAGAGGTGG 45480
Score = 84.2 bits (92), Expect = 2e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 27505 GAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGAT 27564
|| || |||||||||||||| || | | |||||||||||||||||| | || || |
Sbjct 1811020 GAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGACGGA 1810961
Query 27565 CGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| || ||| | ||||| || |||||||||||||||| || || | ||||||
Sbjct 1810960 AGAACTCTATCCGACTACAACATCCAAAAGGAATCCACACTCCACTTGGTCTTG 1810907
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309687112000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |