Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq1 224 8e-54
>seq1
Length=4213555
Score = 224 bits (248), Expect = 8e-54
Identities = 576/855 (67%), Gaps = 23/855 (3%)
Strand=Plus/Plus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
|||||| |||||||| || || |||| ||||||||||||||| ||||| || | ||
Sbjct 1143494 ACACCAGCCTTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAG 1143553
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTCACACTTTAG 4366
||||| ||||||||||| || || || ||||| ||||||| | ||| || || | |
Sbjct 1143554 GAAATGTTTTCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAA- 1143612
Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426
||| || || | || ||| || |||||||| | || ||| |||| | || ||| ||
Sbjct 1143613 AGCAACCAGTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCAT 1143672
Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAA-CTCTTGTTCTATAGTTACGGCTT 4485
|| | || || ||||| |||| | || | ||||| ||| || || ||||
Sbjct 1143673 ACCCAATAGAGAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTT 1143731
Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATT-TACTAAGTATCCAAACA 4542
||||||| || ||||| |||||| ||| || || || | | || || || |
Sbjct 1143732 CTGTGATGAT-TCTTTCGACA-ATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAAT-A 1143788
Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602
||||| ||||| || ||||||||||| ||||||| ||||| |||||| || || |
Sbjct 1143789 GCAAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGG 1143848
Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662
| || || ||||| ||||| |||| || | ||| || || || ||||| || ||||| |
Sbjct 1143849 TCAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGA 1143908
Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT 4722
| || | ||||| ||||| || ||||| || |||| || | || ||||| ||
Sbjct 1143909 AAAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTA-TAG--GGCTTCGT 1143965
Query 4723 CTT---TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATA 4779
| | ||||||| | | ||||| | ||| |||| || | ||||| || | |
Sbjct 1143966 CATCACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAA 1144025
Query 4780 TAGCGTTAAATAA-TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGG 4838
| || || || || | | | || | | || || | || |||||||| || | |
Sbjct 1144026 TGGCATTCAACAAGAATTCGTGTTCCTTA-GGATCCTTGATGTAAGTGTCAATCAACAAC 1144084
Query 4839 CTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCT 4898
||| |||| || || || ||||| || ||| || || ||||| || || | |||
Sbjct 1144085 GAATAAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCT 1144144
Query 4899 TCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCA 4958
|||| | ||| || || | | || |||| || ||||||||||| || ||||| ||
Sbjct 1144145 TCTGGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCG 1144204
Query 4959 CTGGCTGCAAAAAACGCCA--AAACATGAGAT-ATAAAGTACT-GTTCGTCAGGCTTAAG 5014
|| ||||| ||||| | | | ||||| | ||| || |||| || | |
Sbjct 1144205 GAAGCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTC-TCGTTCATTCT 1144263
Query 5015 TTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGC 5074
|| ||||||| | | ||| || | ||||| | ||||||| |||||||||| || ||
Sbjct 1144264 GTTGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGC 1144323
Query 5075 TTCCGCTTTTTTGTA 5089
|| ||| | || ||
Sbjct 1144324 CTCGGCTCTCTTATA 1144338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049079533300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |