Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1 224 8e-54 >seq1 Length=4213555 Score = 224 bits (248), Expect = 8e-54 Identities = 576/855 (67%), Gaps = 23/855 (3%) Strand=Plus/Plus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| |||||||| || || |||| ||||||||||||||| ||||| || | || Sbjct 1143494 ACACCAGCCTTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAG 1143553 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTCACACTTTAG 4366 ||||| ||||||||||| || || || ||||| ||||||| | ||| || || | | Sbjct 1143554 GAAATGTTTTCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAA- 1143612 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 ||| || || | || ||| || |||||||| | || ||| |||| | || ||| || Sbjct 1143613 AGCAACCAGTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCAT 1143672 Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAA-CTCTTGTTCTATAGTTACGGCTT 4485 || | || || ||||| |||| | || | ||||| ||| || || |||| Sbjct 1143673 ACCCAATAGAGAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTT 1143731 Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATT-TACTAAGTATCCAAACA 4542 ||||||| || ||||| |||||| ||| || || || | | || || || | Sbjct 1143732 CTGTGATGAT-TCTTTCGACA-ATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAAT-A 1143788 Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602 ||||| ||||| || ||||||||||| ||||||| ||||| |||||| || || | Sbjct 1143789 GCAAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGG 1143848 Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662 | || || ||||| ||||| |||| || | ||| || || || ||||| || ||||| | Sbjct 1143849 TCAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGA 1143908 Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT 4722 | || | ||||| ||||| || ||||| || |||| || | || ||||| || Sbjct 1143909 AAAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTA-TAG--GGCTTCGT 1143965 Query 4723 CTT---TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATA 4779 | | ||||||| | | ||||| | ||| |||| || | ||||| || | | Sbjct 1143966 CATCACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAA 1144025 Query 4780 TAGCGTTAAATAA-TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGG 4838 | || || || || | | | || | | || || | || |||||||| || | | Sbjct 1144026 TGGCATTCAACAAGAATTCGTGTTCCTTA-GGATCCTTGATGTAAGTGTCAATCAACAAC 1144084 Query 4839 CTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCT 4898 ||| |||| || || || ||||| || ||| || || ||||| || || | ||| Sbjct 1144085 GAATAAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCT 1144144 Query 4899 TCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCA 4958 |||| | ||| || || | | || |||| || ||||||||||| || ||||| || Sbjct 1144145 TCTGGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCG 1144204 Query 4959 CTGGCTGCAAAAAACGCCA--AAACATGAGAT-ATAAAGTACT-GTTCGTCAGGCTTAAG 5014 || ||||| ||||| | | | ||||| | ||| || |||| || | | Sbjct 1144205 GAAGCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTC-TCGTTCATTCT 1144263 Query 5015 TTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGC 5074 || ||||||| | | ||| || | ||||| | ||||||| |||||||||| || || Sbjct 1144264 GTTGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGC 1144323 Query 5075 TTCCGCTTTTTTGTA 5089 || ||| | || || Sbjct 1144324 CTCGGCTCTCTTATA 1144338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049079533300