Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq88 239 6e-58 seq1 239 6e-58 seq83 159 5e-34 >seq88 Length=341902 Score = 239 bits (264), Expect = 6e-58 Identities = 583/878 (66%), Gaps = 14/878 (2%) Strand=Plus/Minus Query 76350 ACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAA 76409 |||||||||| || | || | ||| || ||||| |||||||| | ||||| || || | Sbjct 13883 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 13824 Query 76410 CAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGC 76467 || || || |||||||| | || | ||| | |||| | ||| | ||| | ||| Sbjct 13823 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGC 13766 Query 76468 TTTTATTATAGATTTGTATCGCTTC--TCTCTTTCATATTGTGTATATAACCGTTCAAAT 76525 || | | ||| || | | | ||||| || || || || || ||||||| Sbjct 13765 CTTGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAAT 13708 Query 76526 TCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCA 76585 ||||| || ||||||| || || || ||| || ||| | | ||| | ||| || Sbjct 13707 TCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCT 13648 Query 76586 CCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 76645 | | | || || | ||||| || ||||| || |||||||| || || | ||| Sbjct 13647 TCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCT 13588 Query 76646 CGGGTTCTACG---TTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATA 76702 | || ||| |||||| || || |||||| | | || | ||| || | ||| Sbjct 13587 C---TTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATA 13531 Query 76703 TCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGA 76762 || || |||||||| || | || | || | |||| |||| || ||||| || || Sbjct 13530 TCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGG 13471 Query 76763 TCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA 76822 || | || | ||||||||| || |||| | | |||||||||||| |||||||| ||| Sbjct 13470 TCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTA 13411 Query 76823 CCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATT 76882 || || || |||| ||| ||| || | |||||| || ||| | || || Sbjct 13410 CCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATA 13351 Query 76883 CCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATA 76942 || || || | |||||||| | ||||| ||||| ||||| || || || || || Sbjct 13350 CCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATG 13291 Query 76943 CTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 77002 ||| ||| ||||| | || ||||| |||||||| ||||| ||| || ||| Sbjct 13290 GAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCA 13231 Query 77003 TTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 77062 || || | |||||| || || || ||||| || || ||| | ||| ||||| ||||| Sbjct 13230 TTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCC 13171 Query 77063 ATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGA 77122 | ||| ||| ||||| | || || || ||||| || | ||| | ||| || ||| Sbjct 13170 AAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGA 13111 Query 77123 GGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAA 77182 || ||||| || |||| || ||| | | |||||| || |||||| || || ||| Sbjct 13110 GGACGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAA 13051 Query 77183 CCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 || || |||||| || || ||||| ||||| | ||| Sbjct 13050 CCGAAGTAGTTGAATTGGAAATCTCTGTCGTAGACAAT 13013 >seq1 Length=4213555 Score = 239 bits (264), Expect = 6e-58 Identities = 583/878 (66%), Gaps = 14/878 (2%) Strand=Plus/Plus Query 76350 ACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAA 76409 |||||||||| || | || | ||| || ||||| |||||||| | ||||| || || | Sbjct 3209798 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 3209857 Query 76410 CAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGC 76467 || || || |||||||| | || | ||| | |||| | ||| | ||| | ||| Sbjct 3209858 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGC 3209915 Query 76468 TTTTATTATAGATTTGTATCGCTTC--TCTCTTTCATATTGTGTATATAACCGTTCAAAT 76525 || | | ||| || | | | ||||| || || || || || ||||||| Sbjct 3209916 CTTGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAAT 3209973 Query 76526 TCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCA 76585 ||||| || ||||||| || || || ||| || ||| | | ||| | ||| || Sbjct 3209974 TCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCT 3210033 Query 76586 CCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 76645 | | | || || | ||||| || ||||| || |||||||| || || | ||| Sbjct 3210034 TCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCT 3210093 Query 76646 CGGGTTCTACG---TTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATA 76702 | || ||| |||||| || || |||||| | | || | ||| || | ||| Sbjct 3210094 C---TTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATA 3210150 Query 76703 TCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGA 76762 || || |||||||| || | || | || | |||| |||| || ||||| || || Sbjct 3210151 TCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGG 3210210 Query 76763 TCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA 76822 || | || | ||||||||| || |||| | | |||||||||||| |||||||| ||| Sbjct 3210211 TCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTA 3210270 Query 76823 CCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATT 76882 || || || |||| ||| ||| || | |||||| || ||| | || || Sbjct 3210271 CCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATA 3210330 Query 76883 CCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATA 76942 || || || | |||||||| | ||||| ||||| ||||| || || || || || Sbjct 3210331 CCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATG 3210390 Query 76943 CTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 77002 ||| ||| ||||| | || ||||| |||||||| ||||| ||| || ||| Sbjct 3210391 GAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCA 3210450 Query 77003 TTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 77062 || || | |||||| || || || ||||| || || ||| | ||| ||||| ||||| Sbjct 3210451 TTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCC 3210510 Query 77063 ATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGA 77122 | ||| ||| ||||| | || || || ||||| || | ||| | ||| || ||| Sbjct 3210511 AAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGA 3210570 Query 77123 GGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAA 77182 || ||||| || |||| || ||| | | |||||| || |||||| || || ||| Sbjct 3210571 GGACGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAA 3210630 Query 77183 CCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 || || |||||| || || ||||| ||||| | ||| Sbjct 3210631 CCGAAGTAGTTGAATTGGAAATCTCTGTCGTAGACAAT 3210668 Score = 188 bits (208), Expect = 1e-42 Identities = 576/881 (65%), Gaps = 12/881 (1%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| || || | || ||||| ||||| ||||| || |||| || || ||| Sbjct 1143503 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 1143562 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 |||||||| || || || ||||| || || || ||| || ||||| | | Sbjct 1143563 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 1143622 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 ||||| |||||||| ||||| | || ||||||| ||| ||||| || | || Sbjct 1143623 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 1143682 Query 46519 TTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577 || |||||||| || | ||| | ||||| ||| || ||||| || | || || Sbjct 1143683 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 1143741 Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637 | || | | | ||| | | ||||||| | || | ||||| ||||| Sbjct 1143742 TCTTTCGACAATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAA 1143801 Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697 || || | ||||||||||| | ||| |||||||| || || || | || ||||| Sbjct 1143802 GTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCAT 1143861 Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757 | || ||| || | ||| || || || || || || ||||| || || | ||||| Sbjct 1143862 CAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTTC 1143921 Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGG---CATCATTATGAATCCACCT 46814 || || ||||| || || | ||| || |||| || | |||| | ||||||| || Sbjct 1143922 CACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATCT 1143981 Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 ||||| | |||||||| || | || || ||||| || ||||| || | || Sbjct 1143982 AATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAA 1144041 Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934 | | ||| | | ||| || | || || || || || | ||| |||| || || Sbjct 1144042 TTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTG 1144101 Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994 |||||||| || || || || ||||| ||||| | ||||| | ||| || ||||| Sbjct 1144102 GATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTC 1144161 Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054 | | | || ||| ||| || || ||||| || ||||| ||||||||| || || Sbjct 1144162 AGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGC 1144221 Query 47055 CAATACATGTTTA-ATAAAATATTTTTC---ATCGGT-AGTCAGTTTATTCCAGTCATTG 47109 | || | | | || ||| || | || ||| | | || | || |||||||||| Sbjct 1144222 AAGCAC-TCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTG-TTGTTCCAGTCATGA 1144279 Query 47110 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATAC 47169 | ||| || || | ||| | ||||||||| ||||| || || ||||| ||| | ||||| Sbjct 1144280 AGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAA 1144339 Query 47170 ATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 | ||| || || | || | ||| || |||| ||||| Sbjct 1144340 GCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 1144380 >seq83 Length=768430 Score = 159 bits (176), Expect = 5e-34 Identities = 406/612 (66%), Gaps = 27/612 (4%) Strand=Plus/Minus Query 76597 AACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACG 76656 ||| |||| |||||| ||||| || |||||||||||| ||||| ||||||| || Sbjct 95960 AACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCAT 95901 Query 76657 TTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGG 76716 |||||| ||||| ||||||| | || | || ||| || |||||||| ||||||||| Sbjct 95900 TTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGG 95841 Query 76717 TTCTAGATATATCGCCATAA--CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTG 76774 ||| | ||||| || || |||| || ||||| || || || ||||| | |||||| Sbjct 95840 TTCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTT 95783 Query 76775 GCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCA 76834 || ||||| ||| |||| | || ||| |||| | || || || |||||||| | || Sbjct 95782 GCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCT 95723 Query 76835 GAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCC---TGCC 76891 || |||||| ||| ||| | ||||| | | || || || || || |||| Sbjct 95722 GAGATATAAGCACCATTTGCCCTTATATTTGACACATGTATTCCAATACCACCAGATGCC 95663 Query 76892 ATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCC 76951 || || || | |||| | || || | ||| || || || ||| || || Sbjct 95662 ---TTTGATATCAAAGCAGTCTTGTGTAAAGTCTTATAAATACCATCAATAGAGTCTTCT 95606 Query 76952 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAAT 77011 ||| | |||||| || |||| | |||| || || || ||| ||||| Sbjct 95605 TCCATAGCCACAAGAAAGCATGATGACAAATATTGATTTACTGTACCGCTATTGAACAAA 95546 Query 77012 GTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCT 77071 ||||| || || ||| | || | |||| || | || | ||| || |||| ||||| Sbjct 95545 GTAGGTGAAGCGTGAATAAAATACTTTTGTGACATTAATTGGTAAGTCTCAAGTACTGCA 95486 Query 77072 TCTATATCCCATTGA--------TGAATTCCTACAGCGACACGCATCAACATATGCTGAG 77123 ||||||| |||| | ||||| | | ||| || | ||| |||||| ||| | Sbjct 95485 TCTATAT--CATTAAATGGTCCGTGAATAGCAAGAGCAACTCTCATGAACATAAACTGCG 95428 Query 77124 GTCGTTCTACAGT---CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAA--GTTTT 77178 | ||| ||| || ||| ||| | |||| ||| ||||| || |||| || || Sbjct 95427 GAGTTTCATAAGTTTCCTCATTGTTTCTCTTCATCAAATATGA--CTTACAAAGTGTCTT 95370 Query 77179 AAAACCAAAATA 77190 |||||||||| Sbjct 95369 CCAACCAAAATA 95358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933508832000