Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12-
14] 100 sequences; 10,711,999 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq1 150 4e-31
seq91 149 1e-30
seq88 91.5 3e-13
>seq1
Length=4213555
Score = 150 bits (166), Expect = 4e-31
Identities = 143/183 (78%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| | || | || || || | ||| || || |||||
Sbjct 45445 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAA 45386
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||||||||| |||||||| ||||||||||| ||||| | || || |
Sbjct 45385 GATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATT 45326
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| |||| ||||||||| | |||||| |||||||| ||||| ||||| ||
Sbjct 45325 GTCAATGGTGTCAGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGAC 45266
Query 283088 GAA 283090
|||
Sbjct 45265 GAA 45263
Score = 102 bits (112), Expect = 2e-16
Identities = 132/192 (69%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||| | || || | || || |||| ||| || || |||||
Sbjct 1810928 TTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAA 1810987
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| | ||||||||| |||||||| ||
Sbjct 1810988 AATCAATCTTTGTTGGTCTGGAGGAATACCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNN 1811047
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| |||| ||||||||| | |||||| |||||||| ||||||||||| ||
Sbjct 1811048 NTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGAC 1811107
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 1811108 GAAGATTTGCAT 1811119
Score = 84.2 bits (92), Expect = 5e-11
Identities = 124/176 (70%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085
|| ||||| || || | |||||||| | || || ||||||| || ||||| ||||||
Sbjct 1244602 GTTGGGAAACCGTCAACTTGACCGTTGGCGATAGCTCTCATCAAGGTAGACTTACCAGCA 1244543
Query 317086 CCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145
|| || || || || | ||| || | | | |||||| | || | || ||||||
Sbjct 1244542 CCGTTTGGACCACACAAACCGTATCTTCTGGCTCTCTTCAATCTCAATTGAGTCTTGTTC 1244483
Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
| | ||||| |||| || |||| |||||||||||| | ||||| ||| || ||
Sbjct 1244482 AACAAGATCTTGGCACCGTAAGCCAAAGAGAACTCACAGTTACACAAGTCTTCACC 1244427
>seq91
Length=167622
Score = 149 bits (164), Expect = 1e-30
Identities = 148/192 (77%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| | || | ||||| || | ||| || || |||||
Sbjct 23311 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 23252
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||||||||| |||||||| ||||||||||||||||| | || || |
Sbjct 23251 GATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTTAGACTTGACATT 23192
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| |||| ||||||||| | || || |||||||| || | ||||| ||
Sbjct 23191 GTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGAC 23132
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 23131 GAAAATTTGCAT 23120
>seq88
Length=341902
Score = 91.5 bits (100), Expect = 3e-13
Identities = 181/263 (69%), Gaps = 9/263 (3%)
Strand=Plus/Minus
Query 301426 AAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAA 301485
||||| ||||| || || ||| ||||| | || || ||| || ||||||| |||
Sbjct 194185 AAAATCGACCCATACATGAACCTCGATGCAGGTACAATGTCTCCTTTGGAACATGGTGAA 194126
Query 301486 GTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTC 301545
|| ||| | | ||||||| ||| |||||| ||||| |||| |||| |||||||
Sbjct 194125 TGTTTTGTGTTGAACGATGGTGGTGAGACCGATTTGGATTTGGGTAACTATGAACGTT-- 194068
Query 301546 ACTTCA---TTAACCCTTAAGC-GTGAAAGTAATTTTACGACTGGCCAAGTTTATTTAAA 301601
|||| | ||| | |||| | | || ||| | || ||||| | ||||| | |
Sbjct 194067 ACTTGAACGTTA--CTTTAACCAGAGACCATAACATCACTACTGGTAAGGTTTACTCTCA 194010
Query 301602 AGTTATCGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTGTTCCCCA 301661
||||| | || ||||| | ||| ||| | || ||||| |||||||||||||| ||
Sbjct 194009 TGTTATTGCCAAGGAACGTAAGGGTGATTATTTGGGTAAGACCGTGCAAGTTGTTCCTCA 193950
Query 301662 CATCACCGATGAAATCAAAAGAA 301684
| ||| | ||||| | |||||
Sbjct 193949 TTTGACCAACGAAAT-ACAAGAA 193928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046737858865400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |