Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001466335.1_202015-12- 14] 100 sequences; 10,711,999 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1 152 5e-32 >seq1 Length=4213555 Score = 152 bits (168), Expect = 5e-32 Identities = 534/822 (65%), Gaps = 19/822 (2%) Strand=Plus/Plus Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299 ||||||| ||||| || ||||| | || || || ||||||||||| || ||||| |||| Sbjct 1143525 TTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAATGGGTTAG 1143584 Query 23300 AAGTATTATA-TACAGCTT--TACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATT 23356 || || || ||| ||| | | || || | || ||||| ||||||| Sbjct 1143585 TGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTA---GTCTGTCTGCAACAAATT 1143641 Query 23357 CAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCAT 23416 | | ||||| |||||||||| ||| ||||| | ||| || || | || || Sbjct 1143642 CGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGCGTCGA 1143701 Query 23417 ATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATT---TGAACAATAACTTCTT 23473 ||| || ||||| || |||||| ||| | || ||| | ||||| ||| Sbjct 1143702 TGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAAT--CTTTGG 1143759 Query 23474 CACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTT 23533 || | | | | || |||| | || | ||||| ||||| || || | |||| Sbjct 1143760 ATCTGGCTTGTTCTTC-AAATGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAAACCTT 1143818 Query 23534 CATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAA 23593 |||| || | ||||||||| || || || || || |||||||| || || || || | Sbjct 1143819 CATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTTCTTCA 1143878 Query 23594 TCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCA 23653 ||| || || |||||||| || || || || || | ||| || || || || || || | Sbjct 1143879 ACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAACGCAA 1143938 Query 23654 CAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCT 23713 | | | | | | || || | | |||| ||||||| | | | ||| | ||||| Sbjct 1143939 CCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATCTAATGGCCCATTGAGCCT 1143998 Query 23714 TCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTAT 23773 | ||| | ||| |||||||| || || || | || | ||| | | || Sbjct 1143999 TTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAATTCGTGTTCCTTAGGAT 1144058 Query 23774 CTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAA 23833 | | || || || ||||| | || ||| |||| || || || ||||| || || Sbjct 1144059 CCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTGGATGTTTTCCATCATAA 1144118 Query 23834 TCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAG 23893 | || || || || ||||| | ||||| | | ||| || ||| | | || ||| Sbjct 1144119 TTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAGAAGTTTTCCA 1144178 Query 23894 CTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT-- 23951 | || |||||||| || |||||||| |||||||||||| ||||| || || Sbjct 1144179 CCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACTCTGGAGATGA 1144238 Query 23952 AAAATGTCT--TTCATCAGTTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATC 24008 ||||| ||| ||| || ||| || | || ||||| |||| || ||| || || ||||| Sbjct 1144239 AAAATCTCTCGTTC-TC-GTTCATTCTGTTGTTCCAGTCATGAAGATCCTTGGACAAATC 1144296 Query 24009 AACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATA 24050 | ||| ||| | ||||||||| ||| ||| | |||||| Sbjct 1144297 GATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATA 1144338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487348140000